RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 TRAV2A0A0B4J234 112 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 TMEM238C9JI98 176 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 I3L3M4 83 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 J3QQQ9 107 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 LEPROTO15243 131 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 IGKV3-20P01619 116 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 RBMY1A1P0DJD3 496 aaKnown RBP3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 RBMY1CP0DJD4 496 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 SCGB1A1P11684 91 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 HOXD3P31249 432 aaPredicted RBP3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 EMP1P54849 157 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 SYNJ2BPP57105 145 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 SRSF9Q13242 221 aaKnown RBP eCLIP3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 RBMY1FQ15415 496 aaKnown RBP3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 ZNF56Q15929 161 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 KRTAP21-3Q3LHN1 58 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 ETDBQ3ZM63 59 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 PIK3CD-AS1Q5SR53 167 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 FAM74A4Q5TZK3 123 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 Q6YL49 198 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 SH2D6Q7Z4S9 175 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 DLX4Q92988 240 aaPredicted RBP3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 FAM104AQ969W3 186 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 PTH2Q96A98 100 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 MRPL16Q9NX20 251 aaKnown RBP3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 VPREB3Q9UKI3 123 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 PYGO1Q9Y3Y4 419 aa3.81□□□□□ -1.8
ATPAF1-212ENST00000542495 IGLV4-3A0A075B6K6 122 aa3.8□□□□□ -1.8
ATPAF1-212ENST00000542495 GAGE12HA6NDE8 117 aa3.8□□□□□ -1.8
ATPAF1-212ENST00000542495 J3QR89 54 aa3.8□□□□□ -1.8
ATPAF1-212ENST00000542495 CFC1BP0CG36 223 aa3.8□□□□□ -1.8
ATPAF1-212ENST00000542495 CFC1P0CG37 223 aa3.8□□□□□ -1.8
ATPAF1-212ENST00000542495 ZNF22P17026 224 aaPredicted RBP3.8□□□□□ -1.8
ATPAF1-212ENST00000542495 CRYBA4P53673 196 aa3.8□□□□□ -1.8
ATPAF1-212ENST00000542495 Q5PR19 223 aa3.8□□□□□ -1.8
ATPAF1-212ENST00000542495 TMEM170BQ5T4T1 132 aa3.8□□□□□ -1.8
ATPAF1-212ENST00000542495 SBSPONQ8IVN8 264 aa3.8□□□□□ -1.8
ATPAF1-212ENST00000542495 DEFB104AQ8WTQ1 72 aa3.8□□□□□ -1.8
ATPAF1-212ENST00000542495 TSSC4Q9Y5U2 329 aaPredicted RBP3.8□□□□□ -1.8
ATPAF1-212ENST00000542495 VPS13CQ709C8 3753 aa3.8□□□□□ -1.8
ATPAF1-212ENST00000542495 CELSR1Q9NYQ6 3014 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.79□□□□□ -1.85e-6■■■■□ 22.8
ATPAF1-212ENST00000542495 TRBV20-1A0A075B6N2 111 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 RHODO00212 210 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 TCTEX1D4Q5JR98 221 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 LYRM7Q5U5X0 104 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 Q8N2B8 174 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 C10orf126Q8N4M7 172 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 NRGNQ92686 78 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 SIGMAR1Q99720 223 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 OPRPNQ99935 248 aaPredicted RBP3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 LINC00467Q9BRT7 94 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 C1QTNF4Q9BXJ3 329 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 RBMY1BA6NDE4 496 aaKnown RBP3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 RBMY1EA6NEQ0 496 aaKnown RBP3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 H3BMM0 161 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 M0R2P5 195 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 APOMO95445 188 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 RBMY1DP0C7P1 496 aaKnown RBP3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 LGALS3P17931 250 aaKnown RBP3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 KRTAP10-9P60411 292 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 MRPS36P82909 103 aaKnown RBP3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 FOXI1Q12951 378 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 C11orf44Q8N8P7 122 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 DUX5Q96PT3 197 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 PRO1854Q9UHT4 67 aa3.79□□□□□ -1.8
ATPAF1-212ENST00000542495 HIVEP1P15822 2718 aa3.78□□□□□ -1.8
ATPAF1-212ENST00000542495 CCDC168Q8NDH2 2452 aa3.78□□□□□ -1.8
ATPAF1-212ENST00000542495 A0A0B4J2C4 111 aa3.78□□□□□ -1.8
ATPAF1-212ENST00000542495 A0A0J9YXV3 536 aa3.78□□□□□ -1.8
ATPAF1-212ENST00000542495 KNCNA6PVL3 124 aa3.78□□□□□ -1.8
ATPAF1-212ENST00000542495 A8MWV9 139 aa3.78□□□□□ -1.8
ATPAF1-212ENST00000542495 M0QXV9 152 aa3.78□□□□□ -1.8
ATPAF1-212ENST00000542495 TCL1BO95988 128 aa3.78□□□□□ -1.8
ATPAF1-212ENST00000542495 TGFAP01135 160 aa3.78□□□□□ -1.8
ATPAF1-212ENST00000542495 IGHV3-33P01772 117 aa3.78□□□□□ -1.8
ATPAF1-212ENST00000542495 IGHV4-31P0DP07 118 aa3.78□□□□□ -1.8
ATPAF1-212ENST00000542495 AZU1P20160 251 aa3.78□□□□□ -1.8
ATPAF1-212ENST00000542495 PSMB2P49721 201 aa3.78□□□□□ -1.8
ATPAF1-212ENST00000542495 INSL3P51460 131 aa3.78□□□□□ -1.8
ATPAF1-212ENST00000542495 MTURNQ8N3F0 131 aa3.78□□□□□ -1.8
ATPAF1-212ENST00000542495 TMEM263Q8WUH6 116 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-212ENST00000542495 VCX2Q9H322 139 aa3.78□□□□□ -1.8
ATPAF1-212ENST00000542495 LOC107984156A0A0G2JMH3 177 aa3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 A0A0J9YXY3 114 aa3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 A4D1N5 150 aa3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 PAX4O43316 350 aa3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 SLURP1P55000 103 aa3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 PROK1P58294 105 aa3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 TIRAPP58753 221 aa3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 DEFB131AP59861 70 aa3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 BEAN1Q3B7T3 259 aa3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 Q6ZSN1 163 aa3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 C18orf65Q6ZTR6 163 aa3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 TEN1Q86WV5 123 aa3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 ARL17AQ8IVW1 177 aa3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 C11orf72Q8NBR9 251 aa3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 LINC01600Q96MT4 127 aa3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 LITAFQ99732 161 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms