RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 IGIPA6NJ69 53 aa4.06□□□□□ -1.76
PTPRD-213ENST00000537002 SLPIP03973 132 aa4.06□□□□□ -1.76
PTPRD-213ENST00000537002 F8WEM9 126 aa4.06□□□□□ -1.76
PTPRD-213ENST00000537002 IGLV1-47P01700 117 aa4.06□□□□□ -1.76
PTPRD-213ENST00000537002 A0A096LPF7 62 aa4.06□□□□□ -1.76
PTPRD-213ENST00000537002 USP17L23D6RBM5 183 aa4.06□□□□□ -1.76
PTPRD-213ENST00000537002 XCL1P47992 114 aa4.06□□□□□ -1.76
PTPRD-213ENST00000537002 MALRD1Q5VYJ5 2156 aa4.06□□□□□ -1.76
PTPRD-213ENST00000537002 ZGRF1Q86YA3 2104 aa4.06□□□□□ -1.76
PTPRD-213ENST00000537002 FAM215AQ9Y5M1 114 aa4.06□□□□□ -1.76
PTPRD-213ENST00000537002 H3BQ85 93 aa4.05□□□□□ -1.76
PTPRD-213ENST00000537002 KLK9Q2XQG4 91 aa4.05□□□□□ -1.76
PTPRD-213ENST00000537002 IGHV4-28A0A0C4DH34 117 aa4.05□□□□□ -1.76
PTPRD-213ENST00000537002 POLR2KP53803 58 aaKnown RBP4.05□□□□□ -1.76
PTPRD-213ENST00000537002 MIR7-3HGQ8N6C7 128 aa4.05□□□□□ -1.76
PTPRD-213ENST00000537002 KIR2DL5BQ8NHK3 375 aa4.05□□□□□ -1.76
PTPRD-213ENST00000537002 BPESC1Q9GZL8 116 aa4.05□□□□□ -1.76
PTPRD-213ENST00000537002 IGLV4-69A0A075B6H9 119 aa4.05□□□□□ -1.76
PTPRD-213ENST00000537002 TRBV12-3P01733 135 aa4.05□□□□□ -1.76
PTPRD-213ENST00000537002 DPH3Q96FX2 82 aa4.05□□□□□ -1.76
PTPRD-213ENST00000537002 U3KQE9 123 aa4.05□□□□□ -1.76
PTPRD-213ENST00000537002 C1orf195Q5TG92 126 aa4.04□□□□□ -1.76
PTPRD-213ENST00000537002 SNURFQ9Y675 71 aa4.04□□□□□ -1.76
PTPRD-213ENST00000537002 SERP1Q9Y6X1 66 aa4.04□□□□□ -1.76
PTPRD-213ENST00000537002 DSCAMO60469 2012 aa4.04□□□□□ -1.76
PTPRD-213ENST00000537002 PIK3CD-AS1Q5SR53 167 aa4.04□□□□□ -1.76
PTPRD-213ENST00000537002 A0A087WVE0 104 aa4.04□□□□□ -1.76
PTPRD-213ENST00000537002 JMJD7-PLA2G4BH0Y9G9 81 aa4.04□□□□□ -1.76
PTPRD-213ENST00000537002 TIRAPP58753 221 aa4.04□□□□□ -1.76
PTPRD-213ENST00000537002 C11orf21Q9P2W6 132 aa4.04□□□□□ -1.76
PTPRD-213ENST00000537002 SCXQ7RTU7 201 aa4.04□□□□□ -1.76
PTPRD-213ENST00000537002 FANCD2OSQ96PS1 177 aa4.04□□□□□ -1.76
PTPRD-213ENST00000537002 ICE1Q9Y2F5 2266 aa4.04□□□□□ -1.76
PTPRD-213ENST00000537002 LINC00308Q8TCZ7 52 aa4.04□□□□□ -1.76
PTPRD-213ENST00000537002 DCANP1Q8TF63 244 aa4.04□□□□□ -1.76
PTPRD-213ENST00000537002 PCSK5Q92824 1860 aa4.03□□□□□ -1.76
PTPRD-213ENST00000537002 HIST2H2BCQ6DN03 193 aa4.03□□□□□ -1.76
PTPRD-213ENST00000537002 HIST2H2BDQ6DRA6 164 aa4.03□□□□□ -1.76
PTPRD-213ENST00000537002 ZNF843Q8N446 348 aa4.03□□□□□ -1.76
PTPRD-213ENST00000537002 DEFB105AQ8NG35 78 aa4.03□□□□□ -1.76
PTPRD-213ENST00000537002 SMAD5-AS1Q9Y6J3 95 aa4.03□□□□□ -1.76
PTPRD-213ENST00000537002 MED13Q9UHV7 2174 aa4.03□□□□□ -1.76
PTPRD-213ENST00000537002 SMIM26A0A096LP01 95 aa4.03□□□□□ -1.76
PTPRD-213ENST00000537002 PLA2G2AP14555 144 aa4.03□□□□□ -1.76
PTPRD-213ENST00000537002 Q6ZSV7 163 aa4.03□□□□□ -1.76
PTPRD-213ENST00000537002 ZFAND3Q9H8U3 227 aa4.03□□□□□ -1.76
PTPRD-213ENST00000537002 IGLV4-3A0A075B6K6 122 aa4.03□□□□□ -1.76
PTPRD-213ENST00000537002 C20orf173Q96LM9 149 aa4.03□□□□□ -1.76
PTPRD-213ENST00000537002 TSPEAR-AS2P59090 65 aa4.03□□□□□ -1.76
PTPRD-213ENST00000537002 MRPL55Q7Z7F7 128 aaKnown RBP4.03□□□□□ -1.76
PTPRD-213ENST00000537002 SPTSSBQ8NFR3 76 aa4.03□□□□□ -1.76
PTPRD-213ENST00000537002 K7EQD1 137 aa4.02□□□□□ -1.77
PTPRD-213ENST00000537002 APRG1Q8IVJ8 170 aa4.02□□□□□ -1.77
PTPRD-213ENST00000537002 AMELXQ99217 191 aa4.02□□□□□ -1.77
PTPRD-213ENST00000537002 NCOR1O75376 2440 aa4.02□□□□□ -1.77
PTPRD-213ENST00000537002 PDE6GP18545 87 aa4.02□□□□□ -1.77
PTPRD-213ENST00000537002 CCDC140Q96MF4 163 aa4.02□□□□□ -1.77
PTPRD-213ENST00000537002 UNQ9165/PRO28630Q6UXU0 137 aa4.02□□□□□ -1.77
PTPRD-213ENST00000537002 NOP10Q9NPE3 64 aaKnown RBP4.02□□□□□ -1.77
PTPRD-213ENST00000537002 CDKN2A-AS1Q9UH64 79 aa4.02□□□□□ -1.77
PTPRD-213ENST00000537002 IGFL2Q6UWQ7 119 aa4.02□□□□□ -1.77
PTPRD-213ENST00000537002 PRR9Q5T870 116 aa4.01□□□□□ -1.77
PTPRD-213ENST00000537002 H3BUA1 57 aa4.01□□□□□ -1.77
PTPRD-213ENST00000537002 NDUFA1O15239 70 aa4.01□□□□□ -1.77
PTPRD-213ENST00000537002 ABCA4P78363 2273 aa4.01□□□□□ -1.77
PTPRD-213ENST00000537002 ZNF561-AS1K7EIQ3 104 aa4.01□□□□□ -1.77
PTPRD-213ENST00000537002 NREPQ16612 68 aa4.01□□□□□ -1.77
PTPRD-213ENST00000537002 MRGPRG-AS1Q2M3A8 158 aa4.01□□□□□ -1.77
PTPRD-213ENST00000537002 Q8N9W7 124 aa4.01□□□□□ -1.77
PTPRD-213ENST00000537002 CACNA1BQ00975 2339 aa4.01□□□□□ -1.77
PTPRD-213ENST00000537002 FUSP35637 526 aaKnown RBP eCLIP4.01□□□□□ -1.77
PTPRD-213ENST00000537002 NKAPP1Q8N9T2 125 aa4.01□□□□□ -1.77
PTPRD-213ENST00000537002 IGLV10-54A0A075B6I4 117 aa4□□□□□ -1.77
PTPRD-213ENST00000537002 LINC00467Q9BRT7 94 aa4□□□□□ -1.77
PTPRD-213ENST00000537002 PRR14LQ5THK1 2151 aa4□□□□□ -1.77
PTPRD-213ENST00000537002 TTC28Q96AY4 2481 aa4□□□□□ -1.77
PTPRD-213ENST00000537002 ROS1P08922 2347 aa4□□□□□ -1.77
PTPRD-213ENST00000537002 TMEM256-PLSCR3K7ERE1 68 aa4□□□□□ -1.77
PTPRD-213ENST00000537002 ANGP03950 147 aaKnown RBP4□□□□□ -1.77
PTPRD-213ENST00000537002 LINC01548A6NM66 108 aa4□□□□□ -1.77
PTPRD-213ENST00000537002 LY6LH3BQJ8 138 aa3.99□□□□□ -1.77
PTPRD-213ENST00000537002 ACACAQ13085 2346 aa3.99□□□□□ -1.77
PTPRD-213ENST00000537002 CEP250Q9BV73 2442 aa3.99□□□□□ -1.77
PTPRD-213ENST00000537002 DEFB136Q30KP8 78 aa3.99□□□□□ -1.77
PTPRD-213ENST00000537002 TSHBP01222 138 aa3.99□□□□□ -1.77
PTPRD-213ENST00000537002 M0QY20 66 aa3.99□□□□□ -1.77
PTPRD-213ENST00000537002 ZFAND2AQ8N6M9 145 aa3.99□□□□□ -1.77
PTPRD-213ENST00000537002 GPR179Q6PRD1 2367 aa3.99□□□□□ -1.77
PTPRD-213ENST00000537002 B4DSR2 109 aa3.99□□□□□ -1.77
PTPRD-213ENST00000537002 RPL28P46779 137 aaKnown RBP3.99□□□□□ -1.77
PTPRD-213ENST00000537002 PROK1P58294 105 aa3.99□□□□□ -1.77
PTPRD-213ENST00000537002 ZNF580Q9UK33 172 aa3.99□□□□□ -1.77
PTPRD-213ENST00000537002 NACAE9PAV3 2078 aa3.99□□□□□ -1.77
PTPRD-213ENST00000537002 GRNP28799 593 aaKnown RBP3.99□□□□□ -1.77
PTPRD-213ENST00000537002 BLCAPP62952 87 aa3.99□□□□□ -1.77
PTPRD-213ENST00000537002 CREBBPQ92793 2442 aa3.98□□□□□ -1.77
PTPRD-213ENST00000537002 CNOT1A5YKK6 2376 aaKnown RBP3.98□□□□□ -1.77
PTPRD-213ENST00000537002 CACNA1HO95180 2353 aa3.98□□□□□ -1.77
PTPRD-213ENST00000537002 CDK2AP2O75956 126 aa3.98□□□□□ -1.77
PTPRD-213ENST00000537002 CMC4P56277 68 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms