RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 CIDEAO60543 219 aa14.38□□□□□ -0.11
TNFRSF1A-205ENST00000534885 K7EMI3 77 aa14.37□□□□□ -0.11
TNFRSF1A-205ENST00000534885 NUDT3O95989 172 aa14.37□□□□□ -0.11
TNFRSF1A-205ENST00000534885 ORMDL2Q53FV1 153 aa14.37□□□□□ -0.11
TNFRSF1A-205ENST00000534885 DNAJC30Q96LL9 226 aa14.37□□□□□ -0.11
TNFRSF1A-205ENST00000534885 HSPB8Q9UJY1 196 aa14.37□□□□□ -0.11
TNFRSF1A-205ENST00000534885 BATFQ16520 125 aa14.36□□□□□ -0.11
TNFRSF1A-205ENST00000534885 MRAPQ8TCY5 172 aa14.36□□□□□ -0.11
TNFRSF1A-205ENST00000534885 I3L3M4 83 aa14.35□□□□□ -0.11
TNFRSF1A-205ENST00000534885 TSHBP01222 138 aa14.35□□□□□ -0.11
TNFRSF1A-205ENST00000534885 SPART-AS1P0CW21 52 aa14.35□□□□□ -0.11
TNFRSF1A-205ENST00000534885 DAD1P61803 113 aa14.35□□□□□ -0.11
TNFRSF1A-205ENST00000534885 ATOH7Q8N100 152 aa14.35□□□□□ -0.11
TNFRSF1A-205ENST00000534885 ZNRF2Q8NHG8 242 aa14.35□□□□□ -0.11
TNFRSF1A-205ENST00000534885 TRBV10-1A0A0K0K1A3 114 aa14.35□□□□□ -0.11
TNFRSF1A-205ENST00000534885 LOC100131303A0A0U1RQF7 123 aa14.35□□□□□ -0.11
TNFRSF1A-205ENST00000534885 TRBV6-4A0A1B0GX49 114 aa14.35□□□□□ -0.11
TNFRSF1A-205ENST00000534885 Q6ZN92 141 aa14.35□□□□□ -0.11
TNFRSF1A-205ENST00000534885 TRBV7-3A0A075B6L6 115 aa14.34□□□□□ -0.11
TNFRSF1A-205ENST00000534885 COL5A1-AS1Q5SY13 56 aa14.34□□□□□ -0.11
TNFRSF1A-205ENST00000534885 PHLDA1Q8WV24 401 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF1A-205ENST00000534885 TRAV9-2A0A087WT02 112 aa14.34□□□□□ -0.11
TNFRSF1A-205ENST00000534885 IGHV3-38A0A0C4DH36 116 aa14.34□□□□□ -0.11
TNFRSF1A-205ENST00000534885 C20orf202A1L168 122 aa14.34□□□□□ -0.11
TNFRSF1A-205ENST00000534885 HNRNPA3P51991 378 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-205ENST00000534885 SPATA12Q7Z6I5 190 aa14.34□□□□□ -0.11
TNFRSF1A-205ENST00000534885 RPL36AP83881 106 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1A-205ENST00000534885 RPL36ALQ969Q0 106 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1A-205ENST00000534885 GAGE12JA6NER3 117 aa14.32□□□□□ -0.12
TNFRSF1A-205ENST00000534885 GAGE4Q13068 117 aa14.32□□□□□ -0.12
TNFRSF1A-205ENST00000534885 GAGE5Q13069 117 aa14.32□□□□□ -0.12
TNFRSF1A-205ENST00000534885 MAJINQ3KP22 176 aa14.32□□□□□ -0.12
TNFRSF1A-205ENST00000534885 GAGE13Q4V321 117 aa14.32□□□□□ -0.12
TNFRSF1A-205ENST00000534885 C2orf66Q6UXQ4 117 aa14.32□□□□□ -0.12
TNFRSF1A-205ENST00000534885 HHLA3Q9XRX5 114 aa14.32□□□□□ -0.12
TNFRSF1A-205ENST00000534885 H0Y8G0 127 aa14.32□□□□□ -0.12
TNFRSF1A-205ENST00000534885 SYS1-DBNDD2H3BUS1 97 aa14.32□□□□□ -0.12
TNFRSF1A-205ENST00000534885 RHOHQ15669 191 aa14.32□□□□□ -0.12
TNFRSF1A-205ENST00000534885 TOMM6Q96B49 74 aa14.32□□□□□ -0.12
TNFRSF1A-205ENST00000534885 MAP1LC3CQ9BXW4 147 aa14.32□□□□□ -0.12
TNFRSF1A-205ENST00000534885 KRTAP21-3Q3LHN1 58 aa14.31□□□□□ -0.12
TNFRSF1A-205ENST00000534885 IFI27L1Q96BM0 104 aa14.3□□□□□ -0.12
TNFRSF1A-205ENST00000534885 TM2D3Q9BRN9 247 aa14.3□□□□□ -0.12
TNFRSF1A-205ENST00000534885 RPL39P62891 51 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-205ENST00000534885 C11orf68Q9H3H3 251 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-205ENST00000534885 UBE2D3P61077 147 aa14.29□□□□□ -0.12
TNFRSF1A-205ENST00000534885 UBE2D2P62837 147 aa14.29□□□□□ -0.12
TNFRSF1A-205ENST00000534885 SPATA25Q9BR10 227 aa14.29□□□□□ -0.12
TNFRSF1A-205ENST00000534885 PRADC1Q9BSG0 188 aa14.29□□□□□ -0.12
TNFRSF1A-205ENST00000534885 MRPS16Q9Y3D3 137 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1A-205ENST00000534885 A0A0J9YWU9 116 aa14.29□□□□□ -0.12
TNFRSF1A-205ENST00000534885 NPSP0C0P6 89 aa14.29□□□□□ -0.12
TNFRSF1A-205ENST00000534885 CRYBA4P53673 196 aa14.29□□□□□ -0.12
TNFRSF1A-205ENST00000534885 CYSLTR1Q9Y271 337 aa14.29□□□□□ -0.12
TNFRSF1A-205ENST00000534885 ATP5G1P05496 136 aa14.28□□□□□ -0.12
TNFRSF1A-205ENST00000534885 PRO0255Q9UI72 69 aa14.28□□□□□ -0.12
TNFRSF1A-205ENST00000534885 TEX48A0A1B0GUV7 120 aa14.27□□□□□ -0.12
TNFRSF1A-205ENST00000534885 HUWE1Q7Z6Z7 4374 aaKnown RBP14.27□□□□□ -0.12
TNFRSF1A-205ENST00000534885 C12orf74Q32Q52 190 aa14.27□□□□□ -0.13
TNFRSF1A-205ENST00000534885 STPG4Q8N801 248 aa14.27□□□□□ -0.13
TNFRSF1A-205ENST00000534885 SCGB3A1Q96QR1 104 aa14.27□□□□□ -0.13
TNFRSF1A-205ENST00000534885 C20orf203Q8NBC4 194 aa14.26□□□□□ -0.13
TNFRSF1A-205ENST00000534885 ATP5LO75964 103 aa14.26□□□□□ -0.13
TNFRSF1A-205ENST00000534885 HTN3P15516 51 aa14.26□□□□□ -0.13
TNFRSF1A-205ENST00000534885 PET117Q6UWS5 81 aa14.26□□□□□ -0.13
TNFRSF1A-205ENST00000534885 DAZ4Q86SG3 579 aaKnown RBP14.26□□□□□ -0.13
TNFRSF1A-205ENST00000534885 PMCHL2Q9BQD1 86 aa14.26□□□□□ -0.13
TNFRSF1A-205ENST00000534885 DAZ3Q9NR90 486 aaKnown RBP14.26□□□□□ -0.13
TNFRSF1A-205ENST00000534885 GYPEP15421 78 aa14.25□□□□□ -0.13
TNFRSF1A-205ENST00000534885 RBX1P62877 108 aa14.25□□□□□ -0.13
TNFRSF1A-205ENST00000534885 CHCHD7Q9BUK0 85 aa14.25□□□□□ -0.13
TNFRSF1A-205ENST00000534885 F5H768 121 aa14.24□□□□□ -0.13
TNFRSF1A-205ENST00000534885 LINC00694P0DN24 101 aa14.24□□□□□ -0.13
TNFRSF1A-205ENST00000534885 ERASQ7Z444 233 aa14.24□□□□□ -0.13
TNFRSF1A-205ENST00000534885 A0A0J9YY99 117 aa14.24□□□□□ -0.13
TNFRSF1A-205ENST00000534885 HSBP1L1C9JCN9 74 aa14.24□□□□□ -0.13
TNFRSF1A-205ENST00000534885 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.24□□□□□ -0.13
TNFRSF1A-205ENST00000534885 PAX4O43316 350 aa14.24□□□□□ -0.13
TNFRSF1A-205ENST00000534885 NTM-AS1Q6ZSK4 140 aa14.24□□□□□ -0.13
TNFRSF1A-205ENST00000534885 VSIG2Q96IQ7 327 aa14.24□□□□□ -0.13
TNFRSF1A-205ENST00000534885 IGIPA6NJ69 53 aa14.22□□□□□ -0.13
TNFRSF1A-205ENST00000534885 PRSS1P07477 247 aa14.22□□□□□ -0.13
TNFRSF1A-205ENST00000534885 LINC01545Q5VT33 79 aa14.22□□□□□ -0.13
TNFRSF1A-205ENST00000534885 TRAV26-1A0A087WT03 109 aa14.22□□□□□ -0.13
TNFRSF1A-205ENST00000534885 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.21□□□□□ -0.13
TNFRSF1A-205ENST00000534885 IGKV2-29A2NJV5 120 aaPredicted RBP14.21□□□□□ -0.13
TNFRSF1A-205ENST00000534885 HINT1P49773 126 aaPredicted RBP14.21□□□□□ -0.13
TNFRSF1A-205ENST00000534885 Q6ZTC4 211 aa14.21□□□□□ -0.13
TNFRSF1A-205ENST00000534885 ZMAT4Q9H898 229 aa14.21□□□□□ -0.13
TNFRSF1A-205ENST00000534885 LINC01549A6NIU2 74 aa14.2□□□□□ -0.14
TNFRSF1A-205ENST00000534885 COL7A1Q02388 2944 aa14.2□□□□□ -0.14
TNFRSF1A-205ENST00000534885 BAALCQ8WXS3 180 aa14.19□□□□□ -0.14
TNFRSF1A-205ENST00000534885 NANOS2P60321 138 aaKnown RBP14.19□□□□□ -0.14
TNFRSF1A-205ENST00000534885 ODF1Q14990 250 aa14.19□□□□□ -0.14
TNFRSF1A-205ENST00000534885 LGALS9CQ6DKI2 356 aa14.19□□□□□ -0.14
TNFRSF1A-205ENST00000534885 TIMM17AQ99595 171 aa14.19□□□□□ -0.14
TNFRSF1A-205ENST00000534885 OPRPNQ99935 248 aaPredicted RBP14.19□□□□□ -0.14
TNFRSF1A-205ENST00000534885 DNAH9Q9NYC9 4486 aa14.18□□□□□ -0.14
TNFRSF1A-205ENST00000534885 A0A096LPF7 62 aa14.18□□□□□ -0.14
TNFRSF1A-205ENST00000534885 hDV102S1A0JD36 115 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms