RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 IGHV3-30-5P0DP03 117 aa2.43□□□□□ -2.02
C11orf54-213ENST00000533585 UBE2D1P51668 147 aa2.43□□□□□ -2.02
C11orf54-213ENST00000533585 TXNDC17Q9BRA2 123 aa2.43□□□□□ -2.02
C11orf54-213ENST00000533585 TTTY12Q9BZ98 90 aa2.43□□□□□ -2.02
C11orf54-213ENST00000533585 CEP170BQ9Y4F5 1589 aaPredicted RBP2.43□□□□□ -2.02
C11orf54-213ENST00000533585 C3P01024 1663 aa2.43□□□□□ -2.02
C11orf54-213ENST00000533585 NINQ8N4C6 2090 aa2.43□□□□□ -2.02
C11orf54-213ENST00000533585 PHRF1Q9P1Y6 1649 aaKnown RBP2.42□□□□□ -2.02
C11orf54-213ENST00000533585 COL4A2P08572 1712 aa2.42□□□□□ -2.02
C11orf54-213ENST00000533585 CHD3Q12873 2000 aaKnown RBP2.42□□□□□ -2.02
C11orf54-213ENST00000533585 SNRNP200O75643 2136 aaKnown RBP2.42□□□□□ -2.02
C11orf54-213ENST00000533585 ADAMTS7Q9UKP4 1686 aa2.42□□□□□ -2.02
C11orf54-213ENST00000533585 SYS1-DBNDD2H3BUS1 97 aa2.42□□□□□ -2.02
C11orf54-213ENST00000533585 ADIRFQ15847 76 aa2.42□□□□□ -2.02
C11orf54-213ENST00000533585 REG4Q9BYZ8 158 aa2.42□□□□□ -2.02
C11orf54-213ENST00000533585 NXT2Q9NPJ8 142 aaKnown RBP2.42□□□□□ -2.02
C11orf54-213ENST00000533585 HEATR1Q9H583 2144 aaKnown RBP2.42□□□□□ -2.02
C11orf54-213ENST00000533585 PARP14Q460N5 1801 aa2.42□□□□□ -2.02
C11orf54-213ENST00000533585 RGPD1P0DJD0 1748 aa2.42□□□□□ -2.02
C11orf54-213ENST00000533585 NWD2Q9ULI1 1742 aa2.42□□□□□ -2.02
C11orf54-213ENST00000533585 COL16A1Q07092 1604 aaPredicted RBP2.42□□□□□ -2.02
C11orf54-213ENST00000533585 SHANK1Q9Y566 2161 aa2.42□□□□□ -2.02
C11orf54-213ENST00000533585 PCNX2A6NKB5 2137 aa2.41□□□□□ -2.02
C11orf54-213ENST00000533585 ZFHX2Q9C0A1 2572 aaPredicted RBP2.41□□□□□ -2.02
C11orf54-213ENST00000533585 MYH8P13535 1937 aa2.41□□□□□ -2.02
C11orf54-213ENST00000533585 TRBV7-3A0A075B6L6 115 aa2.41□□□□□ -2.02
C11orf54-213ENST00000533585 TEX49A0A1B0GTD5 131 aa2.41□□□□□ -2.02
C11orf54-213ENST00000533585 RNASE3P12724 160 aaKnown RBP2.41□□□□□ -2.02
C11orf54-213ENST00000533585 WFDC10AQ9H1F0 79 aa2.41□□□□□ -2.02
C11orf54-213ENST00000533585 PRO1854Q9UHT4 67 aa2.41□□□□□ -2.02
C11orf54-213ENST00000533585 PTPRFP10586 1907 aa2.4□□□□□ -2.02
C11orf54-213ENST00000533585 DLG5Q8TDM6 1919 aa2.4□□□□□ -2.02
C11orf54-213ENST00000533585 PXDNQ92626 1479 aa2.4□□□□□ -2.02
C11orf54-213ENST00000533585 LRRC37A3O60309 1634 aa2.4□□□□□ -2.03
C11orf54-213ENST00000533585 HIGD1CA8MV81 97 aa2.4□□□□□ -2.03
C11orf54-213ENST00000533585 DNAL4O96015 105 aa2.4□□□□□ -2.03
C11orf54-213ENST00000533585 IGLV3-1P01715 115 aa2.4□□□□□ -2.03
C11orf54-213ENST00000533585 PDE6GP18545 87 aa2.4□□□□□ -2.03
C11orf54-213ENST00000533585 LINC00304Q8N9R0 145 aa2.4□□□□□ -2.03
C11orf54-213ENST00000533585 FAM167A-AS1Q96KT0 104 aa2.4□□□□□ -2.03
C11orf54-213ENST00000533585 KRTAP2-2Q9BYT5 123 aa2.4□□□□□ -2.03
C11orf54-213ENST00000533585 ST20Q9HBF5 79 aa2.4□□□□□ -2.03
C11orf54-213ENST00000533585 TMEM14CQ9P0S9 112 aa2.4□□□□□ -2.03
C11orf54-213ENST00000533585 SPCS1Q9Y6A9 102 aa2.4□□□□□ -2.03
C11orf54-213ENST00000533585 NFAT5O94916 1531 aa2.4□□□□□ -2.03
C11orf54-213ENST00000533585 MYOFQ9NZM1 2061 aa2.4□□□□□ -2.03
C11orf54-213ENST00000533585 ZSWIM8A7E2V4 1837 aa2.4□□□□□ -2.03
C11orf54-213ENST00000533585 PATJQ8NI35 1801 aa2.4□□□□□ -2.03
C11orf54-213ENST00000533585 CRYBG1Q9Y4K1 1723 aa2.39□□□□□ -2.03
C11orf54-213ENST00000533585 A0A0G2JND7 137 aa2.39□□□□□ -2.03
C11orf54-213ENST00000533585 TRBV6-5A0A0K0K1A5 114 aa2.39□□□□□ -2.03
C11orf54-213ENST00000533585 IGLV3-19P01714 112 aa2.39□□□□□ -2.03
C11orf54-213ENST00000533585 EDDM3BP56851 147 aa2.39□□□□□ -2.03
C11orf54-213ENST00000533585 COA5Q86WW8 74 aa2.39□□□□□ -2.03
C11orf54-213ENST00000533585 MED12LQ86YW9 2145 aa2.39□□□□□ -2.03
C11orf54-213ENST00000533585 MRC1P22897 1456 aa2.39□□□□□ -2.03
C11orf54-213ENST00000533585 FAM208AQ9UK61 1670 aaKnown RBP2.38□□□□□ -2.03
C11orf54-213ENST00000533585 IGLV3-32A0A0A0MS00 114 aa2.38□□□□□ -2.03
C11orf54-213ENST00000533585 CHKB-CPT1BH3BT56 60 aa2.38□□□□□ -2.03
C11orf54-213ENST00000533585 COX6CP09669 75 aa2.38□□□□□ -2.03
C11orf54-213ENST00000533585 KRTAP10-9P60411 292 aa2.38□□□□□ -2.03
C11orf54-213ENST00000533585 UBE2D3P61077 147 aa2.38□□□□□ -2.03
C11orf54-213ENST00000533585 UBE2D2P62837 147 aa2.38□□□□□ -2.03
C11orf54-213ENST00000533585 SSBP1Q04837 148 aaKnown RBP2.38□□□□□ -2.03
C11orf54-213ENST00000533585 HCP5Q6MZN7 132 aa2.38□□□□□ -2.03
C11orf54-213ENST00000533585 Q8N6K4 173 aa2.38□□□□□ -2.03
C11orf54-213ENST00000533585 AMELYQ99218 206 aa2.38□□□□□ -2.03
C11orf54-213ENST00000533585 SMCO4Q9NRQ5 59 aa2.38□□□□□ -2.03
C11orf54-213ENST00000533585 FMN2Q9NZ56 1722 aa2.38□□□□□ -2.03
C11orf54-213ENST00000533585 DIP2BQ9P265 1576 aa2.38□□□□□ -2.03
C11orf54-213ENST00000533585 CEP192Q8TEP8 1941 aa2.38□□□□□ -2.03
C11orf54-213ENST00000533585 RGPD4Q7Z3J3 1758 aa2.38□□□□□ -2.03
C11orf54-213ENST00000533585 NRXN3Q9Y4C0 1643 aa2.38□□□□□ -2.03
C11orf54-213ENST00000533585 LMO7Q8WWI1 1683 aa2.37□□□□□ -2.03
C11orf54-213ENST00000533585 UBR1Q8IWV7 1749 aa2.37□□□□□ -2.03
C11orf54-213ENST00000533585 XRN1Q8IZH2 1706 aaKnown RBP2.37□□□□□ -2.03
C11orf54-213ENST00000533585 TRAV22A0A0B4J277 110 aa2.37□□□□□ -2.03
C11orf54-213ENST00000533585 ELOF1P60002 83 aaKnown RBP2.37□□□□□ -2.03
C11orf54-213ENST00000533585 DEFA5Q01523 94 aa2.37□□□□□ -2.03
C11orf54-213ENST00000533585 ZNF56Q15929 161 aa2.37□□□□□ -2.03
C11orf54-213ENST00000533585 C20orf197Q8N268 126 aa2.37□□□□□ -2.03
C11orf54-213ENST00000533585 CYSTM1Q9H1C7 97 aa2.37□□□□□ -2.03
C11orf54-213ENST00000533585 KIF1AQ12756 1690 aa2.37□□□□□ -2.03
C11orf54-213ENST00000533585 MPDZO75970 2070 aa2.37□□□□□ -2.03
C11orf54-213ENST00000533585 BRWD1Q9NSI6 2320 aa2.36□□□□□ -2.03
C11orf54-213ENST00000533585 PRRC2AP48634 2157 aaKnown RBP2.36□□□□□ -2.03
C11orf54-213ENST00000533585 H7BZZ5 65 aa2.36□□□□□ -2.03
C11orf54-213ENST00000533585 SMIM11AP58511 58 aa2.36□□□□□ -2.03
C11orf54-213ENST00000533585 ETDBQ3ZM63 59 aa2.36□□□□□ -2.03
C11orf54-213ENST00000533585 Q5VV11 94 aa2.36□□□□□ -2.03
C11orf54-213ENST00000533585 DYNLRB1Q9NP97 96 aa2.36□□□□□ -2.03
C11orf54-213ENST00000533585 KDM3BQ7LBC6 1761 aa2.36□□□□□ -2.03
C11orf54-213ENST00000533585 SIP14410 1827 aa2.35□□□□□ -2.03
C11orf54-213ENST00000533585 TANC1Q9C0D5 1861 aa2.35□□□□□ -2.03
C11orf54-213ENST00000533585 ZNF142P52746 1687 aaPredicted RBP2.35□□□□□ -2.03
C11orf54-213ENST00000533585 TCHHQ07283 1943 aa2.35□□□□□ -2.03
C11orf54-213ENST00000533585 TRBV6-7A0A0A0MS04 114 aa2.35□□□□□ -2.03
C11orf54-213ENST00000533585 LOC101927531A0A1B0GV80 90 aa2.35□□□□□ -2.03
C11orf54-213ENST00000533585 A0A1W2PPM0 123 aa2.35□□□□□ -2.03
C11orf54-213ENST00000533585 RPL37AP61513 92 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms