RNA–Protein interactions for RNA: ENST00000527389.2

ATM-211, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-211ENST00000527389 PAPPA2Q9BXP8 1791 aa-0.8□□□□□ -2.54
ATM-211ENST00000527389 PNMA8CA0A1B0GUJ8 204 aa-0.8□□□□□ -2.54
ATM-211ENST00000527389 HIST1H1BP16401 226 aaKnown RBP-0.8□□□□□ -2.54
ATM-211ENST00000527389 SPRR2EP22531 72 aa-0.8□□□□□ -2.54
ATM-211ENST00000527389 SPRR2AP35326 72 aa-0.8□□□□□ -2.54
ATM-211ENST00000527389 MRPS15P82914 257 aaKnown RBP-0.8□□□□□ -2.54
ATM-211ENST00000527389 C9orf116Q5BN46 136 aaPredicted RBP-0.8□□□□□ -2.54
ATM-211ENST00000527389 Q5VV11 94 aa-0.8□□□□□ -2.54
ATM-211ENST00000527389 PPP1R2P3Q6NXS1 205 aa-0.8□□□□□ -2.54
ATM-211ENST00000527389 ATP11AUNQ6ZP68 121 aa-0.8□□□□□ -2.54
ATM-211ENST00000527389 NDUFA11Q86Y39 141 aa-0.8□□□□□ -2.54
ATM-211ENST00000527389 ATP6V0E2Q8NHE4 81 aa-0.8□□□□□ -2.54
ATM-211ENST00000527389 CHMP6Q96FZ7 201 aa-0.8□□□□□ -2.54
ATM-211ENST00000527389 PCBD2Q9H0N5 130 aa-0.8□□□□□ -2.54
ATM-211ENST00000527389 AGPAT4-IT1Q9H0P7 198 aa-0.8□□□□□ -2.54
ATM-211ENST00000527389 BANF2Q9H503 90 aa-0.8□□□□□ -2.54
ATM-211ENST00000527389 SCN3BQ9NY72 215 aa-0.8□□□□□ -2.54
ATM-211ENST00000527389 SMPXQ9UHP9 88 aa-0.8□□□□□ -2.54
ATM-211ENST00000527389 LRRC37A3O60309 1634 aa-0.8□□□□□ -2.54
ATM-211ENST00000527389 ERCC6L2Q5T890 1561 aa-0.8□□□□□ -2.54
ATM-211ENST00000527389 NBEAQ8NFP9 2946 aa-0.8□□□□□ -2.54
ATM-211ENST00000527389 TRAV2A0A0B4J234 112 aa-0.81□□□□□ -2.54
ATM-211ENST00000527389 HLA-DRB4P13762 266 aa-0.81□□□□□ -2.54
ATM-211ENST00000527389 PSPHP78330 225 aa-0.81□□□□□ -2.54
ATM-211ENST00000527389 CFAP126Q5VTH2 177 aa-0.81□□□□□ -2.54
ATM-211ENST00000527389 MIC13Q5XKP0 118 aa-0.81□□□□□ -2.54
ATM-211ENST00000527389 STOML2Q9UJZ1 356 aa-0.81□□□□□ -2.54
ATM-211ENST00000527389 HLA-DRB4X5D2U9 266 aa-0.81□□□□□ -2.54
ATM-211ENST00000527389 DNAH11Q96DT5 4516 aa-0.81□□□□□ -2.54
ATM-211ENST00000527389 MARF1Q9Y4F3 1742 aaKnown RBP-0.81□□□□□ -2.54
ATM-211ENST00000527389 PDCD11Q14690 1871 aaKnown RBP-0.82□□□□□ -2.54
ATM-211ENST00000527389 WDR87Q6ZQQ6 2873 aa-0.82□□□□□ -2.54
ATM-211ENST00000527389 BIRC6Q9NR09 4857 aa-0.82□□□□□ -2.54
ATM-211ENST00000527389 NBEAL2Q6ZNJ1 2754 aa-0.82□□□□□ -2.54
ATM-211ENST00000527389 GCN1Q92616 2671 aaKnown RBP-0.82□□□□□ -2.54
ATM-211ENST00000527389 FXYD6-FXYD2A0A087WZ82 144 aa-0.82□□□□□ -2.54
ATM-211ENST00000527389 J3KT08 172 aa-0.82□□□□□ -2.54
ATM-211ENST00000527389 J3QLW9 94 aa-0.82□□□□□ -2.54
ATM-211ENST00000527389 M0R2P5 195 aa-0.82□□□□□ -2.54
ATM-211ENST00000527389 TNFSF15O95150 251 aa-0.82□□□□□ -2.54
ATM-211ENST00000527389 PAEPP09466 180 aa-0.82□□□□□ -2.54
ATM-211ENST00000527389 KLK9Q2XQG4 91 aa-0.82□□□□□ -2.54
ATM-211ENST00000527389 TMEM128Q5BJH2 165 aa-0.82□□□□□ -2.54
ATM-211ENST00000527389 TRIQKQ629K1 86 aa-0.82□□□□□ -2.54
ATM-211ENST00000527389 TP53AIP1Q9HCN2 124 aa-0.82□□□□□ -2.54
ATM-211ENST00000527389 ERG28Q9UKR5 140 aa-0.82□□□□□ -2.54
ATM-211ENST00000527389 IQSEC2Q5JU85 1478 aa-0.82□□□□□ -2.54
ATM-211ENST00000527389 NEBP20929 6669 aa-0.82□□□□□ -2.54
ATM-211ENST00000527389 ZNF609O15014 1411 aa-0.82□□□□□ -2.54
ATM-211ENST00000527389 PHLPP1O60346 1717 aa-0.83□□□□□ -2.54
ATM-211ENST00000527389 MRC1P22897 1456 aa-0.83□□□□□ -2.54
ATM-211ENST00000527389 LOC730098B7Z3J9 87 aa-0.83□□□□□ -2.54
ATM-211ENST00000527389 PGRMC1O00264 195 aaKnown RBP-0.83□□□□□ -2.54
ATM-211ENST00000527389 UBE2G1P62253 170 aa-0.83□□□□□ -2.54
ATM-211ENST00000527389 LSM3P62310 102 aaKnown RBP-0.83□□□□□ -2.54
ATM-211ENST00000527389 OR9Q1Q8NGQ5 310 aa-0.83□□□□□ -2.54
ATM-211ENST00000527389 VPS25Q9BRG1 176 aa-0.83□□□□□ -2.54
ATM-211ENST00000527389 LINC00472Q9H8W2 130 aa-0.83□□□□□ -2.54
ATM-211ENST00000527389 ROCK1Q13464 1354 aa-0.83□□□□□ -2.54
ATM-211ENST00000527389 LRRK2Q5S007 2527 aa-0.84□□□□□ -2.54
ATM-211ENST00000527389 TRAV36DV7A0A075B6V5 113 aa-0.84□□□□□ -2.54
ATM-211ENST00000527389 FAM236AA0A1B0GUQ0 79 aa-0.84□□□□□ -2.54
ATM-211ENST00000527389 FAM236BA0A1B0GV22 79 aa-0.84□□□□□ -2.54
ATM-211ENST00000527389 M0R2T5 61 aa-0.84□□□□□ -2.54
ATM-211ENST00000527389 PIN1P1O15428 100 aa-0.84□□□□□ -2.54
ATM-211ENST00000527389 DPM2O94777 84 aa-0.84□□□□□ -2.54
ATM-211ENST00000527389 FAM107AO95990 144 aa-0.84□□□□□ -2.54
ATM-211ENST00000527389 PIRTP0C851 137 aa-0.84□□□□□ -2.54
ATM-211ENST00000527389 CCL18P55774 89 aa-0.84□□□□□ -2.54
ATM-211ENST00000527389 SAMD13Q5VXD3 122 aa-0.84□□□□□ -2.54
ATM-211ENST00000527389 NPVFQ9HCQ7 196 aa-0.84□□□□□ -2.54
ATM-211ENST00000527389 HIGD1AQ9Y241 93 aa-0.84□□□□□ -2.54
ATM-211ENST00000527389 SPCS1Q9Y6A9 102 aa-0.84□□□□□ -2.54
ATM-211ENST00000527389 ARHGEF5Q12774 1597 aa-0.84□□□□□ -2.54
ATM-211ENST00000527389 ARHGEF10O15013 1369 aa-0.84□□□□□ -2.54
ATM-211ENST00000527389 CCDC168Q8NDH2 2452 aa-0.84□□□□□ -2.54
ATM-211ENST00000527389 SCN7AQ01118 1682 aa-0.84□□□□□ -2.54
ATM-211ENST00000527389 UTP20O75691 2785 aaKnown RBP-0.85□□□□□ -2.54
ATM-211ENST00000527389 HYDINQ4G0P3 5121 aa-0.85□□□□□ -2.54
ATM-211ENST00000527389 SHROOM2Q13796 1616 aa-0.85□□□□□ -2.55
ATM-211ENST00000527389 COL14A1Q05707 1796 aaKnown RBP-0.85□□□□□ -2.55
ATM-211ENST00000527389 TRBV6-1A0A0K0K1D8 114 aa-0.85□□□□□ -2.55
ATM-211ENST00000527389 CCDC179H3BU77 68 aa-0.85□□□□□ -2.55
ATM-211ENST00000527389 E2F6O75461 281 aa-0.85□□□□□ -2.55
ATM-211ENST00000527389 TFAMQ00059 246 aaKnown RBP-0.85□□□□□ -2.55
ATM-211ENST00000527389 PDE4DIPQ5VU43 2346 aa-0.85□□□□□ -2.55
ATM-211ENST00000527389 TOMM20LQ6UXN7 152 aa-0.85□□□□□ -2.55
ATM-211ENST00000527389 BAGE3Q86Y29 109 aa-0.85□□□□□ -2.55
ATM-211ENST00000527389 OR8I2Q8N0Y5 310 aa-0.85□□□□□ -2.55
ATM-211ENST00000527389 TMEM35BQ8NCS4 154 aa-0.85□□□□□ -2.55
ATM-211ENST00000527389 CASKIN1Q8WXD9 1431 aa-0.85□□□□□ -2.55
ATM-211ENST00000527389 SDF2Q99470 211 aa-0.85□□□□□ -2.55
ATM-211ENST00000527389 CALML5Q9NZT1 146 aa-0.85□□□□□ -2.55
ATM-211ENST00000527389 ATPIF1Q9UII2 106 aa-0.85□□□□□ -2.55
ATM-211ENST00000527389 LINC00312Q9Y6C7 94 aa-0.85□□□□□ -2.55
ATM-211ENST00000527389 DSPP15924 2871 aaKnown RBP-0.85□□□□□ -2.55
ATM-211ENST00000527389 RIMS1Q86UR5 1692 aaKnown RBP-0.85□□□□□ -2.55
ATM-211ENST00000527389 ROBO1Q9Y6N7 1651 aa-0.85□□□□□ -2.55
ATM-211ENST00000527389 PKD1L2Q7Z442 2459 aa-0.86□□□□□ -2.55
ATM-211ENST00000527389 ACACAQ13085 2346 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms