RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 IGKV1D-37A0A075B6S9 117 aa12.85□□□□□ -0.35
BEST1-203ENST00000524877 NDUFA12Q9UI09 145 aa12.85□□□□□ -0.35
BEST1-203ENST00000524877 ASPHD1Q5U4P2 390 aa12.85□□□□□ -0.35
BEST1-203ENST00000524877 ODF1Q14990 250 aa12.84□□□□□ -0.35
BEST1-203ENST00000524877 K7EN84 100 aa12.84□□□□□ -0.35
BEST1-203ENST00000524877 SPATA12Q7Z6I5 190 aa12.84□□□□□ -0.35
BEST1-203ENST00000524877 CAMK2N2Q96S95 79 aa12.84□□□□□ -0.35
BEST1-203ENST00000524877 NXPH4O95158 308 aa12.84□□□□□ -0.35
BEST1-203ENST00000524877 C14orf177Q52M58 125 aa12.84□□□□□ -0.35
BEST1-203ENST00000524877 RNASE13Q5GAN3 156 aaKnown RBP12.84□□□□□ -0.35
BEST1-203ENST00000524877 CHD3Q12873 2000 aaKnown RBP12.84□□□□□ -0.35
BEST1-203ENST00000524877 C20orf197Q8N268 126 aa12.84□□□□□ -0.35
BEST1-203ENST00000524877 Q6ZPA2 131 aa12.84□□□□□ -0.35
BEST1-203ENST00000524877 ORMDL1Q9P0S3 153 aa12.84□□□□□ -0.35
BEST1-203ENST00000524877 BRWD1-AS2P59051 145 aa12.83□□□□□ -0.35
BEST1-203ENST00000524877 IGLC6P0CF74 106 aa12.83□□□□□ -0.36
BEST1-203ENST00000524877 COX7A2LO14548 114 aa12.83□□□□□ -0.36
BEST1-203ENST00000524877 ATG2AQ2TAZ0 1938 aa12.83□□□□□ -0.36
BEST1-203ENST00000524877 Q6ZS46 218 aa12.83□□□□□ -0.36
BEST1-203ENST00000524877 SLC25A29Q8N8R3 303 aa12.83□□□□□ -0.36
BEST1-203ENST00000524877 TRBV6-1A0A0K0K1D8 114 aa12.82□□□□□ -0.36
BEST1-203ENST00000524877 OXLD1Q5BKU9 147 aa12.82□□□□□ -0.36
BEST1-203ENST00000524877 ABCA1O95477 2261 aa12.82□□□□□ -0.36
BEST1-203ENST00000524877 KIR2DL5BQ8NHK3 375 aa12.82□□□□□ -0.36
BEST1-203ENST00000524877 ATP5EP56381 51 aaPredicted RBP12.82□□□□□ -0.36
BEST1-203ENST00000524877 TIRAPP58753 221 aa12.82□□□□□ -0.36
BEST1-203ENST00000524877 IGLV10-54A0A075B6I4 117 aa12.81□□□□□ -0.36
BEST1-203ENST00000524877 VSIG2Q96IQ7 327 aa12.81□□□□□ -0.36
BEST1-203ENST00000524877 TIMM17BO60830 172 aa12.81□□□□□ -0.36
BEST1-203ENST00000524877 ZFAND3Q9H8U3 227 aa12.8□□□□□ -0.36
BEST1-203ENST00000524877 MP68P56378 58 aa12.8□□□□□ -0.36
BEST1-203ENST00000524877 ZFP2Q6ZN57 461 aa12.79□□□□□ -0.36
BEST1-203ENST00000524877 MDFICQ9P1T7 246 aa12.79□□□□□ -0.36
BEST1-203ENST00000524877 RPL39LQ96EH5 51 aaKnown RBP12.78□□□□□ -0.36
BEST1-203ENST00000524877 FAM19A5Q7Z5A7 132 aaPredicted RBP12.78□□□□□ -0.36
BEST1-203ENST00000524877 IGF2RP11717 2491 aa12.78□□□□□ -0.36
BEST1-203ENST00000524877 TRBV10-1A0A0K0K1A3 114 aa12.77□□□□□ -0.36
BEST1-203ENST00000524877 KLK12Q9UKR0 248 aa12.77□□□□□ -0.36
BEST1-203ENST00000524877 LINC00173Q6ZV60 143 aa12.77□□□□□ -0.36
BEST1-203ENST00000524877 IGHV4-28A0A0C4DH34 117 aa12.77□□□□□ -0.37
BEST1-203ENST00000524877 PCNX3Q9H6A9 2034 aa12.77□□□□□ -0.37
BEST1-203ENST00000524877 C5orf38Q86SI9 138 aa12.77□□□□□ -0.37
BEST1-203ENST00000524877 Q6ZTI0 123 aa12.76□□□□□ -0.37
BEST1-203ENST00000524877 SMIM26A0A096LP01 95 aa12.76□□□□□ -0.37
BEST1-203ENST00000524877 FUSP35637 526 aaKnown RBP eCLIP12.76□□□□□ -0.37
BEST1-203ENST00000524877 COX7CP15954 63 aa12.75□□□□□ -0.37
BEST1-203ENST00000524877 CHKB-CPT1BH3BT56 60 aa12.74□□□□□ -0.37
BEST1-203ENST00000524877 NDUFA1O15239 70 aa12.74□□□□□ -0.37
BEST1-203ENST00000524877 CRYGDP07320 174 aa12.74□□□□□ -0.37
BEST1-203ENST00000524877 TRAV23DV6A0A075B6W5 121 aa12.74□□□□□ -0.37
BEST1-203ENST00000524877 IGHV4-30-4P0DP06 118 aa12.73□□□□□ -0.37
BEST1-203ENST00000524877 IMUPQ9GZP8 106 aa12.73□□□□□ -0.37
BEST1-203ENST00000524877 TCL1BO95988 128 aa12.73□□□□□ -0.37
BEST1-203ENST00000524877 TNRC6BQ9UPQ9 1833 aaKnown RBP12.73□□□□□ -0.37
BEST1-203ENST00000524877 SERP2Q8N6R1 65 aa12.73□□□□□ -0.37
BEST1-203ENST00000524877 E9PLD3 99 aa12.73□□□□□ -0.37
BEST1-203ENST00000524877 LY6G6CO95867 125 aa12.72□□□□□ -0.37
BEST1-203ENST00000524877 C11orf1Q9H5F2 150 aa12.72□□□□□ -0.37
BEST1-203ENST00000524877 KIAA1549Q9HCM3 1950 aa12.72□□□□□ -0.37
BEST1-203ENST00000524877 TP53TG3Q9ULZ0 132 aa12.72□□□□□ -0.37
BEST1-203ENST00000524877 ARFGEF3Q5TH69 2177 aa12.72□□□□□ -0.37
BEST1-203ENST00000524877 GATA1P15976 413 aaPredicted RBP12.72□□□□□ -0.37
BEST1-203ENST00000524877 PMAIP1Q13794 54 aa12.71□□□□□ -0.37
BEST1-203ENST00000524877 GTSF1Q8WW33 167 aa12.71□□□□□ -0.37
BEST1-203ENST00000524877 NUPR2A6NF83 97 aa12.71□□□□□ -0.37
BEST1-203ENST00000524877 MSRB1Q9NZV6 116 aa12.71□□□□□ -0.38
BEST1-203ENST00000524877 PRO0628Q9UI54 55 aa12.71□□□□□ -0.38
BEST1-203ENST00000524877 XGP55808 180 aa12.71□□□□□ -0.38
BEST1-203ENST00000524877 NDUFC1O43677 76 aa12.7□□□□□ -0.38
BEST1-203ENST00000524877 H0YGX0 51 aa12.7□□□□□ -0.38
BEST1-203ENST00000524877 CTRLP40313 264 aa12.7□□□□□ -0.38
BEST1-203ENST00000524877 CRIP2P52943 208 aaPredicted RBP12.7□□□□□ -0.38
BEST1-203ENST00000524877 NFE4Q86UQ8 179 aa12.7□□□□□ -0.38
BEST1-203ENST00000524877 ZNF580Q9UK33 172 aa12.7□□□□□ -0.38
BEST1-203ENST00000524877 DOCK11Q5JSL3 2073 aa12.69□□□□□ -0.38
BEST1-203ENST00000524877 MED13LQ71F56 2210 aa12.69□□□□□ -0.38
BEST1-203ENST00000524877 P0DMU3 169 aa12.69□□□□□ -0.38
BEST1-203ENST00000524877 FAM231AP0DMU4 169 aa12.69□□□□□ -0.38
BEST1-203ENST00000524877 FAM231CP0DMU5 169 aa12.69□□□□□ -0.38
BEST1-203ENST00000524877 WFDC10AQ9H1F0 79 aa12.69□□□□□ -0.38
BEST1-203ENST00000524877 NOTCH2Q04721 2471 aa12.68□□□□□ -0.38
BEST1-203ENST00000524877 PTPN13Q12923 2485 aa12.68□□□□□ -0.38
BEST1-203ENST00000524877 NCOA6Q14686 2063 aaPredicted RBP12.68□□□□□ -0.38
BEST1-203ENST00000524877 A0A0J9YWU9 116 aa12.68□□□□□ -0.38
BEST1-203ENST00000524877 Q6Q795 121 aa12.68□□□□□ -0.38
BEST1-203ENST00000524877 SDIM1Q6ZPB5 146 aa12.68□□□□□ -0.38
BEST1-203ENST00000524877 UPK3BQ9BT76 320 aa12.68□□□□□ -0.38
BEST1-203ENST00000524877 JMJD7-PLA2G4BH0Y9G9 81 aa12.67□□□□□ -0.38
BEST1-203ENST00000524877 COX7B2Q8TF08 81 aa12.67□□□□□ -0.38
BEST1-203ENST00000524877 C14orf132Q9NPU4 83 aa12.67□□□□□ -0.38
BEST1-203ENST00000524877 TEX49A0A1B0GTD5 131 aa12.67□□□□□ -0.38
BEST1-203ENST00000524877 CACNA1AO00555 2505 aa12.67□□□□□ -0.38
BEST1-203ENST00000524877 PTPRBP23467 1997 aa12.67□□□□□ -0.38
BEST1-203ENST00000524877 PRRC2AP48634 2157 aaKnown RBP12.67□□□□□ -0.38
BEST1-203ENST00000524877 ETDCA0A1B0GVM5 59 aa12.66□□□□□ -0.38
BEST1-203ENST00000524877 TTTY13Q9BZ97 58 aa12.66□□□□□ -0.38
BEST1-203ENST00000524877 PPDPFQ9H3Y8 114 aa12.66□□□□□ -0.38
BEST1-203ENST00000524877 MLST8Q9BVC4 326 aa12.66□□□□□ -0.38
BEST1-203ENST00000524877 RAI1Q7Z5J4 1906 aaPredicted RBP12.66□□□□□ -0.38
BEST1-203ENST00000524877 Q9H8V8 135 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms