RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 ZNF56Q15929 161 aa2□□□□□ -2.09
SKP1-209ENST00000522552 ETDBQ3ZM63 59 aa2□□□□□ -2.09
SKP1-209ENST00000522552 SFTA2Q6UW10 78 aa2□□□□□ -2.09
SKP1-209ENST00000522552 ST20Q9HBF5 79 aa2□□□□□ -2.09
SKP1-209ENST00000522552 TMEM14CQ9P0S9 112 aa2□□□□□ -2.09
SKP1-209ENST00000522552 HIGD1BQ9P298 99 aa2□□□□□ -2.09
SKP1-209ENST00000522552 DIP2BQ9P265 1576 aa2□□□□□ -2.09
SKP1-209ENST00000522552 A0A1B0GVY2 172 aa1.99□□□□□ -2.09
SKP1-209ENST00000522552 INE1O15225 51 aa1.99□□□□□ -2.09
SKP1-209ENST00000522552 IL9P15248 144 aa1.99□□□□□ -2.09
SKP1-209ENST00000522552 EDDM3BP56851 147 aa1.99□□□□□ -2.09
SKP1-209ENST00000522552 SSBP1Q04837 148 aaKnown RBP1.99□□□□□ -2.09
SKP1-209ENST00000522552 CCDC88BA6NC98 1476 aa1.99□□□□□ -2.09
SKP1-209ENST00000522552 CCDC141Q6ZP82 1450 aa1.99□□□□□ -2.09
SKP1-209ENST00000522552 COL5A3P25940 1745 aaPredicted RBP1.99□□□□□ -2.09
SKP1-209ENST00000522552 EDC4Q6P2E9 1401 aaKnown RBP1.99□□□□□ -2.09
SKP1-209ENST00000522552 ATP10BO94823 1461 aa1.99□□□□□ -2.09
SKP1-209ENST00000522552 IGLV3-32A0A0A0MS00 114 aa1.99□□□□□ -2.09
SKP1-209ENST00000522552 IGKV3D-7A0A0C4DH55 119 aa1.99□□□□□ -2.09
SKP1-209ENST00000522552 IGKV3OR2-268A0A0C4DH90 116 aa1.99□□□□□ -2.09
SKP1-209ENST00000522552 CCL3L1P16619 93 aa1.99□□□□□ -2.09
SKP1-209ENST00000522552 RPL37AP61513 92 aaKnown RBP1.99□□□□□ -2.09
SKP1-209ENST00000522552 LINC00322Q6ZN03 302 aaPredicted RBP1.99□□□□□ -2.09
SKP1-209ENST00000522552 VMO1Q7Z5L0 202 aa1.99□□□□□ -2.09
SKP1-209ENST00000522552 DEFB132Q7Z7B7 95 aa1.99□□□□□ -2.09
SKP1-209ENST00000522552 NDUFA4L2Q9NRX3 87 aa1.99□□□□□ -2.09
SKP1-209ENST00000522552 KIF14Q15058 1648 aa1.98□□□□□ -2.09
SKP1-209ENST00000522552 CLTCQ00610 1675 aaKnown RBP1.98□□□□□ -2.09
SKP1-209ENST00000522552 CDK13Q14004 1512 aaKnown RBP1.98□□□□□ -2.09
SKP1-209ENST00000522552 TRBV6-7A0A0A0MS04 114 aa1.98□□□□□ -2.09
SKP1-209ENST00000522552 NBDYA0A0U1RRE5 68 aa1.98□□□□□ -2.09
SKP1-209ENST00000522552 M0R2N4 97 aa1.98□□□□□ -2.09
SKP1-209ENST00000522552 SPATA45Q537H7 98 aa1.98□□□□□ -2.09
SKP1-209ENST00000522552 NMSQ5H8A3 153 aa1.98□□□□□ -2.09
SKP1-209ENST00000522552 COX7B2Q8TF08 81 aa1.98□□□□□ -2.09
SKP1-209ENST00000522552 ZNF625Q96I27 306 aaPredicted RBP1.98□□□□□ -2.09
SKP1-209ENST00000522552 CDC42SE2Q9NRR3 84 aa1.98□□□□□ -2.09
SKP1-209ENST00000522552 TOP2BQ02880 1626 aa1.98□□□□□ -2.09
SKP1-209ENST00000522552 RREB1Q92766 1687 aa1.98□□□□□ -2.09
SKP1-209ENST00000522552 STRCP1A6NGW2 1772 aa1.97□□□□□ -2.09
SKP1-209ENST00000522552 TNRC6BQ9UPQ9 1833 aaKnown RBP1.97□□□□□ -2.09
SKP1-209ENST00000522552 GBF1Q92538 1859 aa1.97□□□□□ -2.09
SKP1-209ENST00000522552 A0A1W2PPM0 123 aa1.97□□□□□ -2.09
SKP1-209ENST00000522552 ELOF1P60002 83 aaKnown RBP1.97□□□□□ -2.09
SKP1-209ENST00000522552 WFDC2Q14508 124 aa1.97□□□□□ -2.09
SKP1-209ENST00000522552 FAM223AQ8IWN6 122 aa1.97□□□□□ -2.09
SKP1-209ENST00000522552 DYNLRB1Q9NP97 96 aa1.97□□□□□ -2.09
SKP1-209ENST00000522552 HMGN4O00479 90 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 PPP1R17O96001 155 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 IGKV1-17P01599 117 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 COX6CP09669 75 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 FXYD4P59646 89 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 FXYD3Q14802 87 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 SMCO4Q9NRQ5 59 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 LENEPQ9Y5L5 61 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 PDCD11Q14690 1871 aaKnown RBP1.96□□□□□ -2.1
SKP1-209ENST00000522552 FANCAO15360 1455 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 POLA1P09884 1462 aaPredicted RBP1.96□□□□□ -2.1
SKP1-209ENST00000522552 UNC13BO14795 1591 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 ADGRB2O60241 1585 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 MED13LQ71F56 2210 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 SDK1Q7Z5N4 2213 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 AFDNP55196 1824 aaKnown RBP1.96□□□□□ -2.1
SKP1-209ENST00000522552 SPRR5A0A1B0GTR4 108 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 IGKV2-29A2NJV5 120 aaPredicted RBP1.96□□□□□ -2.1
SKP1-209ENST00000522552 TMEM14DPA8MWL7 114 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 C10orf142B7Z368 130 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 DEFA5Q01523 94 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 KLKP1Q107X0 134 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 Q5BKY6 102 aa1.96□□□□□ -2.1
SKP1-209ENST00000522552 UBR1Q8IWV7 1749 aa1.95□□□□□ -2.1
SKP1-209ENST00000522552 IGKV2-40A0A087WW87 121 aaPredicted RBP1.95□□□□□ -2.1
SKP1-209ENST00000522552 LOC110117498A0A087WWA1 95 aa1.95□□□□□ -2.1
SKP1-209ENST00000522552 IGKV2D-40P01614 121 aaPredicted RBP1.95□□□□□ -2.1
SKP1-209ENST00000522552 IGLC2P0DOY2 106 aa1.95□□□□□ -2.1
SKP1-209ENST00000522552 IGLC3P0DOY3 106 aa1.95□□□□□ -2.1
SKP1-209ENST00000522552 PMCHL1Q16048 86 aa1.95□□□□□ -2.1
SKP1-209ENST00000522552 BVES-AS1Q5T3Y7 98 aa1.95□□□□□ -2.1
SKP1-209ENST00000522552 NLRP1Q9C000 1473 aa1.95□□□□□ -2.1
SKP1-209ENST00000522552 NRXN1Q9ULB1 1477 aa1.95□□□□□ -2.1
SKP1-209ENST00000522552 PEAK1Q9H792 1746 aa1.95□□□□□ -2.1
SKP1-209ENST00000522552 MYO7BQ6PIF6 2116 aa1.95□□□□□ -2.1
SKP1-209ENST00000522552 TRBV25-1A0A075B6N4 114 aa1.94□□□□□ -2.1
SKP1-209ENST00000522552 LRRC37A3O60309 1634 aa1.94□□□□□ -2.1
SKP1-209ENST00000522552 KRTAP10-3P60369 221 aa1.94□□□□□ -2.1
SKP1-209ENST00000522552 SPAG11BQ08648 103 aa1.94□□□□□ -2.1
SKP1-209ENST00000522552 SPAG11AQ6PDA7 123 aa1.94□□□□□ -2.1
SKP1-209ENST00000522552 MYO3AQ8NEV4 1616 aa1.94□□□□□ -2.1
SKP1-209ENST00000522552 PRO0461Q9UI25 63 aa1.94□□□□□ -2.1
SKP1-209ENST00000522552 MAP3K4Q9Y6R4 1608 aa1.94□□□□□ -2.1
SKP1-209ENST00000522552 LOC285556D6RIA3 1793 aa1.94□□□□□ -2.1
SKP1-209ENST00000522552 PHRF1Q9P1Y6 1649 aaKnown RBP1.94□□□□□ -2.1
SKP1-209ENST00000522552 BLMP54132 1417 aaPredicted RBP1.93□□□□□ -2.1
SKP1-209ENST00000522552 KRTAP9-6A8MVA2 160 aa1.93□□□□□ -2.1
SKP1-209ENST00000522552 PDCD5O14737 125 aa1.93□□□□□ -2.1
SKP1-209ENST00000522552 HCRTO43612 131 aa1.93□□□□□ -2.1
SKP1-209ENST00000522552 FAM74A4Q5TZK3 123 aa1.93□□□□□ -2.1
SKP1-209ENST00000522552 XAF1Q6GPH4 301 aa1.93□□□□□ -2.1
SKP1-209ENST00000522552 C5orf56Q8N8D9 126 aa1.93□□□□□ -2.1
SKP1-209ENST00000522552 SNURFQ9Y675 71 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms