RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 UBE2G1P62253 170 aa6.28□□□□□ -1.4
CTNNA1-221ENST00000520339 PRR27Q6MZM9 219 aa6.28□□□□□ -1.4
CTNNA1-221ENST00000520339 FAM159AQ6UWV7 190 aa6.28□□□□□ -1.4
CTNNA1-221ENST00000520339 PRSS3P2Q8NHM4 247 aa6.28□□□□□ -1.4
CTNNA1-221ENST00000520339 FMC1Q96HJ9 113 aa6.28□□□□□ -1.4
CTNNA1-221ENST00000520339 SPANXA1Q9NS26 97 aa6.28□□□□□ -1.4
CTNNA1-221ENST00000520339 TRAV9-2A0A087WT02 112 aa6.27□□□□□ -1.41
CTNNA1-221ENST00000520339 TRAV4A0A0B4J268 109 aa6.27□□□□□ -1.41
CTNNA1-221ENST00000520339 M0R2P5 195 aa6.27□□□□□ -1.41
CTNNA1-221ENST00000520339 ORM1P02763 201 aa6.27□□□□□ -1.41
CTNNA1-221ENST00000520339 SRIP30626 198 aa6.27□□□□□ -1.41
CTNNA1-221ENST00000520339 FUSP35637 526 aaKnown RBP eCLIP6.27□□□□□ -1.41
CTNNA1-221ENST00000520339 GOLT1AQ6ZVE7 132 aa6.27□□□□□ -1.41
CTNNA1-221ENST00000520339 Q86TA4 180 aa6.27□□□□□ -1.41
CTNNA1-221ENST00000520339 NFE4Q86UQ8 179 aa6.27□□□□□ -1.41
CTNNA1-221ENST00000520339 ISOC2Q96AB3 205 aa6.27□□□□□ -1.41
CTNNA1-221ENST00000520339 TRBV24-1A0A075B6N3 115 aa6.26□□□□□ -1.41
CTNNA1-221ENST00000520339 A0A087WTM6 91 aa6.26□□□□□ -1.41
CTNNA1-221ENST00000520339 TRAV21A0A0B4J279 112 aa6.26□□□□□ -1.41
CTNNA1-221ENST00000520339 TRGC1P0CF51 173 aa6.26□□□□□ -1.41
CTNNA1-221ENST00000520339 DNAH10OSP0CZ25 163 aa6.26□□□□□ -1.41
CTNNA1-221ENST00000520339 SMIM17P0DL12 118 aa6.26□□□□□ -1.41
CTNNA1-221ENST00000520339 XGP55808 180 aa6.26□□□□□ -1.41
CTNNA1-221ENST00000520339 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
CTNNA1-221ENST00000520339 LCE1DQ5T752 114 aa6.26□□□□□ -1.41
CTNNA1-221ENST00000520339 WFDC10BQ8IUB3 73 aa6.26□□□□□ -1.41
CTNNA1-221ENST00000520339 TMEM75Q8N9X5 138 aa6.26□□□□□ -1.41
CTNNA1-221ENST00000520339 SFRP2Q96HF1 295 aa6.26□□□□□ -1.41
CTNNA1-221ENST00000520339 BTF3L4Q96K17 158 aa6.26□□□□□ -1.41
CTNNA1-221ENST00000520339 TRAV8-1A0A0A6YYK1 113 aa6.25□□□□□ -1.41
CTNNA1-221ENST00000520339 TRAV34A0A0B4J273 112 aa6.25□□□□□ -1.41
CTNNA1-221ENST00000520339 TRBV6-1A0A0K0K1D8 114 aa6.25□□□□□ -1.41
CTNNA1-221ENST00000520339 LOC100131303A0A0U1RQF7 123 aa6.25□□□□□ -1.41
CTNNA1-221ENST00000520339 FBLL1A6NHQ2 334 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-221ENST00000520339 K7EN84 100 aa6.25□□□□□ -1.41
CTNNA1-221ENST00000520339 TYMSP04818 313 aa6.25□□□□□ -1.41
CTNNA1-221ENST00000520339 MGST1P10620 155 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-221ENST00000520339 EVI2AP22794 236 aa6.25□□□□□ -1.41
CTNNA1-221ENST00000520339 ELOBQ15370 118 aa6.25□□□□□ -1.41
CTNNA1-221ENST00000520339 TEX43Q6ZNM6 134 aa6.25□□□□□ -1.41
CTNNA1-221ENST00000520339 BAGE2Q86Y30 109 aa6.25□□□□□ -1.41
CTNNA1-221ENST00000520339 OCC1Q8TAD7 63 aa6.25□□□□□ -1.41
CTNNA1-221ENST00000520339 LINC00479Q96M42 142 aa6.25□□□□□ -1.41
CTNNA1-221ENST00000520339 LTAP01374 205 aa6.24□□□□□ -1.41
CTNNA1-221ENST00000520339 IGLV2-8P01709 118 aa6.24□□□□□ -1.41
CTNNA1-221ENST00000520339 GATA1P15976 413 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-221ENST00000520339 KRTAP10-1P60331 282 aa6.24□□□□□ -1.41
CTNNA1-221ENST00000520339 C10orf25Q5T742 122 aa6.24□□□□□ -1.41
CTNNA1-221ENST00000520339 KCNIP4Q6PIL6 250 aa6.24□□□□□ -1.41
CTNNA1-221ENST00000520339 SH2D6Q7Z4S9 175 aa6.24□□□□□ -1.41
CTNNA1-221ENST00000520339 NHLRC2Q8NBF2 726 aa6.24□□□□□ -1.41
CTNNA1-221ENST00000520339 OR10G8Q8NGN5 311 aa6.24□□□□□ -1.41
CTNNA1-221ENST00000520339 SGK494Q96LW2 274 aa6.24□□□□□ -1.41
CTNNA1-221ENST00000520339 C11orf21Q9P2W6 132 aa6.24□□□□□ -1.41
CTNNA1-221ENST00000520339 DNAH8Q96JB1 4490 aa6.23□□□□□ -1.41
CTNNA1-221ENST00000520339 RS1O15537 224 aa6.23□□□□□ -1.41
CTNNA1-221ENST00000520339 CRYGDP07320 174 aa6.23□□□□□ -1.41
CTNNA1-221ENST00000520339 ZNF80P51504 273 aaPredicted RBP6.23□□□□□ -1.41
CTNNA1-221ENST00000520339 PRNTQ86SH4 94 aa6.23□□□□□ -1.41
CTNNA1-221ENST00000520339 KCNS1Q96KK3 526 aa6.23□□□□□ -1.41
CTNNA1-221ENST00000520339 OSTCQ9NRP0 149 aa6.23□□□□□ -1.41
CTNNA1-221ENST00000520339 PSG8Q9UQ74 426 aa6.23□□□□□ -1.41
CTNNA1-221ENST00000520339 URGCP-MRPS24S4R325 110 aa6.23□□□□□ -1.41
CTNNA1-221ENST00000520339 IGHV3-38A0A0C4DH36 116 aa6.22□□□□□ -1.41
CTNNA1-221ENST00000520339 GAGE12JA6NER3 117 aa6.22□□□□□ -1.41
CTNNA1-221ENST00000520339 EPM2AB3EWF7 344 aa6.22□□□□□ -1.41
CTNNA1-221ENST00000520339 TSPAN13O95857 204 aa6.22□□□□□ -1.41
CTNNA1-221ENST00000520339 IGLV2-11P01706 119 aa6.22□□□□□ -1.41
CTNNA1-221ENST00000520339 PFN1P07737 140 aaKnown RBP6.22□□□□□ -1.41
CTNNA1-221ENST00000520339 CAMPP49913 170 aa6.22□□□□□ -1.41
CTNNA1-221ENST00000520339 CFAP126Q5VTH2 177 aa6.22□□□□□ -1.41
CTNNA1-221ENST00000520339 NIT1Q86X76 327 aa6.22□□□□□ -1.41
CTNNA1-221ENST00000520339 C10orf126Q8N4M7 172 aa6.22□□□□□ -1.41
CTNNA1-221ENST00000520339 FRZBQ92765 325 aa6.22□□□□□ -1.41
CTNNA1-221ENST00000520339 PTH2Q96A98 100 aa6.22□□□□□ -1.41
CTNNA1-221ENST00000520339 C9orf85Q96MD7 179 aa6.22□□□□□ -1.41
CTNNA1-221ENST00000520339 NDFIP1Q9BT67 221 aa6.22□□□□□ -1.41
CTNNA1-221ENST00000520339 RNASE7Q9H1E1 156 aaKnown RBP6.22□□□□□ -1.41
CTNNA1-221ENST00000520339 UQCR10Q9UDW1 63 aa6.22□□□□□ -1.41
CTNNA1-221ENST00000520339 LRCOL1A6NCL2 159 aa6.21□□□□□ -1.42
CTNNA1-221ENST00000520339 TRGC2P03986 189 aa6.21□□□□□ -1.42
CTNNA1-221ENST00000520339 ZNF876PQ49A33 203 aa6.21□□□□□ -1.42
CTNNA1-221ENST00000520339 LINC01556Q5JQF7 62 aa6.21□□□□□ -1.42
CTNNA1-221ENST00000520339 FAM231DQ6ZW35 169 aa6.21□□□□□ -1.42
CTNNA1-221ENST00000520339 SLC25A29Q8N8R3 303 aa6.21□□□□□ -1.42
CTNNA1-221ENST00000520339 KRTAP9-3Q9BYQ3 159 aa6.21□□□□□ -1.42
CTNNA1-221ENST00000520339 IL36BQ9NZH7 164 aa6.21□□□□□ -1.42
CTNNA1-221ENST00000520339 V9GYV3 84 aa6.21□□□□□ -1.42
CTNNA1-221ENST00000520339 VPS13BQ7Z7G8 4022 aa6.21□□□□□ -1.42
CTNNA1-221ENST00000520339 HERC1Q15751 4861 aa6.2□□□□□ -1.42
CTNNA1-221ENST00000520339 TRAV9-1A0A075B6T8 112 aa6.2□□□□□ -1.42
CTNNA1-221ENST00000520339 IGHV3-73A0A0B4J1V6 119 aa6.2□□□□□ -1.42
CTNNA1-221ENST00000520339 TRBV6-4A0A1B0GX49 114 aa6.2□□□□□ -1.42
CTNNA1-221ENST00000520339 IBA57-AS1B1ANH7 110 aa6.2□□□□□ -1.42
CTNNA1-221ENST00000520339 P01737 135 aa6.2□□□□□ -1.42
CTNNA1-221ENST00000520339 RNASE3P12724 160 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-221ENST00000520339 PRADC1Q9BSG0 188 aa6.2□□□□□ -1.42
CTNNA1-221ENST00000520339 LAMTOR2Q9Y2Q5 125 aa6.2□□□□□ -1.42
CTNNA1-221ENST00000520339 TRAV8-6A0A0B4J262 113 aa6.19□□□□□ -1.42
CTNNA1-221ENST00000520339 CXCL1P09341 107 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms