RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 MAPKAPK5-AS1Q8N8E1 139 aa19■□□□□ 0.63
COL13A1-210ENST00000517713 CHCHD7Q9BUK0 85 aa19■□□□□ 0.63
COL13A1-210ENST00000517713 HIGD1BQ9P298 99 aa19■□□□□ 0.63
COL13A1-210ENST00000517713 IGLV4-3A0A075B6K6 122 aa18.99■□□□□ 0.63
COL13A1-210ENST00000517713 IGHV3-38A0A0C4DH36 116 aa18.99■□□□□ 0.63
COL13A1-210ENST00000517713 GAGE12BA1L429 117 aa18.98■□□□□ 0.63
COL13A1-210ENST00000517713 E9PLD3 99 aa18.98■□□□□ 0.63
COL13A1-210ENST00000517713 K7EQD1 137 aa18.98■□□□□ 0.63
COL13A1-210ENST00000517713 GAGE7O76087 117 aa18.98■□□□□ 0.63
COL13A1-210ENST00000517713 GAGE12FP0CL80 117 aa18.98■□□□□ 0.63
COL13A1-210ENST00000517713 GAGE12GP0CL81 117 aa18.98■□□□□ 0.63
COL13A1-210ENST00000517713 GAGE12IP0CL82 117 aa18.98■□□□□ 0.63
COL13A1-210ENST00000517713 OR11H2Q8NH07 326 aa18.98■□□□□ 0.63
COL13A1-210ENST00000517713 ZNRF2Q8NHG8 242 aa18.98■□□□□ 0.63
COL13A1-210ENST00000517713 TRBV25-1A0A075B6N4 114 aa18.98■□□□□ 0.63
COL13A1-210ENST00000517713 ZNF25P17030 456 aaPredicted RBP18.98■□□□□ 0.63
COL13A1-210ENST00000517713 COTL1Q14019 142 aa18.98■□□□□ 0.63
COL13A1-210ENST00000517713 TRBV10-1A0A0K0K1A3 114 aa18.97■□□□□ 0.63
COL13A1-210ENST00000517713 TRBV7-3A0A075B6L6 115 aa18.96■□□□□ 0.63
COL13A1-210ENST00000517713 TRGV2A0A075B6R0 118 aa18.96■□□□□ 0.63
COL13A1-210ENST00000517713 VCX2Q9H322 139 aa18.96■□□□□ 0.63
COL13A1-210ENST00000517713 ZMAT5Q9UDW3 170 aaKnown RBP18.96■□□□□ 0.63
COL13A1-210ENST00000517713 RPL36AP83881 106 aaKnown RBP18.95■□□□□ 0.62
COL13A1-210ENST00000517713 SLC25A29Q8N8R3 303 aa18.95■□□□□ 0.62
COL13A1-210ENST00000517713 RPL36ALQ969Q0 106 aaKnown RBP18.95■□□□□ 0.62
COL13A1-210ENST00000517713 PRADC1Q9BSG0 188 aa18.95■□□□□ 0.62
COL13A1-210ENST00000517713 SEC11AP67812 179 aa18.94■□□□□ 0.62
COL13A1-210ENST00000517713 CHAC1Q9BUX1 264 aa18.94■□□□□ 0.62
COL13A1-210ENST00000517713 CIDEAO60543 219 aa18.93■□□□□ 0.62
COL13A1-210ENST00000517713 NFE4Q86UQ8 179 aa18.93■□□□□ 0.62
COL13A1-210ENST00000517713 ORAOV1Q8WV07 137 aa18.93■□□□□ 0.62
COL13A1-210ENST00000517713 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.93■□□□□ 0.62
COL13A1-210ENST00000517713 IGKV2-29A2NJV5 120 aaPredicted RBP18.93■□□□□ 0.62
COL13A1-210ENST00000517713 NPSP0C0P6 89 aa18.93■□□□□ 0.62
COL13A1-210ENST00000517713 HERVK_113P61574 105 aa18.93■□□□□ 0.62
COL13A1-210ENST00000517713 Q6ZVH6 145 aa18.93■□□□□ 0.62
COL13A1-210ENST00000517713 WFDC9Q8NEX5 89 aa18.93■□□□□ 0.62
COL13A1-210ENST00000517713 FAM104AQ969W3 186 aa18.93■□□□□ 0.62
COL13A1-210ENST00000517713 COX11Q9Y6N1 276 aa18.93■□□□□ 0.62
COL13A1-210ENST00000517713 TMEM170BQ5T4T1 132 aa18.92■□□□□ 0.62
COL13A1-210ENST00000517713 CEMP1Q6PRD7 247 aaPredicted RBP18.92■□□□□ 0.62
COL13A1-210ENST00000517713 SPANXA1Q9NS26 97 aa18.92■□□□□ 0.62
COL13A1-210ENST00000517713 UBE2D4Q9Y2X8 147 aa18.92■□□□□ 0.62
COL13A1-210ENST00000517713 MYMXA0A1B0GTQ4 84 aa18.91■□□□□ 0.62
COL13A1-210ENST00000517713 CRYBA4P53673 196 aa18.91■□□□□ 0.62
COL13A1-210ENST00000517713 AMELXQ99217 191 aa18.91■□□□□ 0.62
COL13A1-210ENST00000517713 TENM1Q9UKZ4 2725 aa18.91■□□□□ 0.62
COL13A1-210ENST00000517713 TAX1BP3O14907 124 aa18.9■□□□□ 0.62
COL13A1-210ENST00000517713 VWFP04275 2813 aa18.89■□□□□ 0.62
COL13A1-210ENST00000517713 DAZ4Q86SG3 579 aaKnown RBP18.89■□□□□ 0.61
COL13A1-210ENST00000517713 DAZ3Q9NR90 486 aaKnown RBP18.89■□□□□ 0.61
COL13A1-210ENST00000517713 GAGE12JA6NER3 117 aa18.88■□□□□ 0.61
COL13A1-210ENST00000517713 GAGE1Q13065 139 aa18.88■□□□□ 0.61
COL13A1-210ENST00000517713 GAGE4Q13068 117 aa18.88■□□□□ 0.61
COL13A1-210ENST00000517713 GAGE5Q13069 117 aa18.88■□□□□ 0.61
COL13A1-210ENST00000517713 GAGE13Q4V321 117 aa18.88■□□□□ 0.61
COL13A1-210ENST00000517713 UBE2D3P61077 147 aa18.88■□□□□ 0.61
COL13A1-210ENST00000517713 UBE2D2P62837 147 aa18.88■□□□□ 0.61
COL13A1-210ENST00000517713 LINC00469Q8N7U9 141 aa18.88■□□□□ 0.61
COL13A1-210ENST00000517713 A0A0J9YXV3 536 aa18.87■□□□□ 0.61
COL13A1-210ENST00000517713 X6R8D5 127 aa18.87■□□□□ 0.61
COL13A1-210ENST00000517713 TRGV4A0A0C4DH28 118 aa18.86■□□□□ 0.61
COL13A1-210ENST00000517713 TRBV6-4A0A1B0GX49 114 aa18.86■□□□□ 0.61
COL13A1-210ENST00000517713 A6NDN8 102 aa18.86■□□□□ 0.61
COL13A1-210ENST00000517713 SMIM9A6NGZ8 99 aa18.86■□□□□ 0.61
COL13A1-210ENST00000517713 KIR2DL5BQ8NHK3 375 aa18.85■□□□□ 0.61
COL13A1-210ENST00000517713 NOTCH3Q9UM47 2321 aa18.85■□□□□ 0.61
COL13A1-210ENST00000517713 ZNF815PA8K554 130 aa18.84■□□□□ 0.61
COL13A1-210ENST00000517713 RNASE13Q5GAN3 156 aaKnown RBP18.84■□□□□ 0.61
COL13A1-210ENST00000517713 WIPF1O43516 503 aa18.84■□□□□ 0.61
COL13A1-210ENST00000517713 GCSHP23434 173 aa18.84■□□□□ 0.61
COL13A1-210ENST00000517713 TEP1Q99973 2627 aaKnown RBP18.84■□□□□ 0.61
COL13A1-210ENST00000517713 F8P00451 2351 aa18.84■□□□□ 0.61
COL13A1-210ENST00000517713 ZNF22P17026 224 aaPredicted RBP18.83■□□□□ 0.61
COL13A1-210ENST00000517713 FHL2Q14192 279 aa18.83■□□□□ 0.61
COL13A1-210ENST00000517713 APOC4P55056 127 aa18.83■□□□□ 0.6
COL13A1-210ENST00000517713 NTM-AS1Q6ZSK4 140 aa18.83■□□□□ 0.6
COL13A1-210ENST00000517713 TIMM21Q9BVV7 248 aa18.83■□□□□ 0.6
COL13A1-210ENST00000517713 TMEM223A0PJW6 202 aa18.82■□□□□ 0.6
COL13A1-210ENST00000517713 MRPS36P82909 103 aaKnown RBP18.82■□□□□ 0.6
COL13A1-210ENST00000517713 TAL2Q16559 108 aa18.82■□□□□ 0.6
COL13A1-210ENST00000517713 Q6ZUT4 128 aa18.82■□□□□ 0.6
COL13A1-210ENST00000517713 CEND1Q8N111 149 aa18.81■□□□□ 0.6
COL13A1-210ENST00000517713 LINC00612Q8N6U2 182 aa18.81■□□□□ 0.6
COL13A1-210ENST00000517713 LOC100131303A0A0U1RQF7 123 aa18.81■□□□□ 0.6
COL13A1-210ENST00000517713 DEFB130BP0DP73 79 aa18.81■□□□□ 0.6
COL13A1-210ENST00000517713 DEFB130AP0DP74 79 aa18.81■□□□□ 0.6
COL13A1-210ENST00000517713 KRTAP24-1Q3LI83 254 aa18.81■□□□□ 0.6
COL13A1-210ENST00000517713 ATRQ13535 2644 aa18.8■□□□□ 0.6
COL13A1-210ENST00000517713 FXYD2P54710 66 aa18.79■□□□□ 0.6
COL13A1-210ENST00000517713 DGAT2L7PQ6IED9 249 aa18.79■□□□□ 0.6
COL13A1-210ENST00000517713 TM2D2Q9BX73 214 aa18.79■□□□□ 0.6
COL13A1-210ENST00000517713 HIST1H4GQ99525 98 aa18.79■□□□□ 0.6
COL13A1-210ENST00000517713 TSPEAR-AS2P59090 65 aa18.78■□□□□ 0.6
COL13A1-210ENST00000517713 DEFB135Q30KP9 77 aa18.78■□□□□ 0.6
COL13A1-210ENST00000517713 GTSF1LQ9H1H1 148 aa18.78■□□□□ 0.6
COL13A1-210ENST00000517713 H3BRM9 83 aa18.78■□□□□ 0.6
COL13A1-210ENST00000517713 J3QQQ9 107 aa18.77■□□□□ 0.6
COL13A1-210ENST00000517713 LEPROTO15243 131 aa18.77■□□□□ 0.6
COL13A1-210ENST00000517713 SCGB1D4Q6XE38 83 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms