RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 PTH2Q96A98 100 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 CCDC42Q96M95 316 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 GPX7Q96SL4 187 aaPredicted RBP-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 PAIP2Q9BPZ3 127 aaKnown RBP-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 WFDC6Q9BQY6 131 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 SLC35B3Q9H1N7 401 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 SSR3Q9UNL2 185 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 NOP16Q9Y3C1 178 aaKnown RBP-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 ASB4Q9Y574 426 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 MUC17Q685J3 4493 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 PTPRMP28827 1452 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 MAGI1Q96QZ7 1491 aaPredicted RBP-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 C5P01031 1676 aa-0.56□□□□□ -2.5
RNU4-49P-201ENST00000516080 IBTKQ9P2D0 1353 aaPredicted RBP-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 MED23Q9ULK4 1368 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 ARHGEF5Q12774 1597 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 DMXL1Q9Y485 3027 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 TRAV13-1A0A0B4J241 112 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 C9orf92A6NGG3 77 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 H7C1C5 153 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 J3QLW9 94 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 YKT6O15498 198 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 E2F6O75461 281 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 RPP14O95059 124 aaKnown RBP-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 IFNA17P01571 189 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 CRYGSP22914 178 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 DEFB1P60022 68 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 LCN6P62502 163 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 MT1HP80294 61 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 MRPS15P82914 257 aaKnown RBP-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 COTL1Q14019 142 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 HSD17B12Q53GQ0 312 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 AKR1C8PQ5T2L2 129 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 DCUN1D2Q6PH85 259 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 HEPN1Q6WQI6 88 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 PHF5AQ7RTV0 110 aaKnown RBP-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 LINC00305Q7Z4B0 112 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 STX19Q8N4C7 294 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 DEFB123Q8N688 67 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 FDCSPQ8NFU4 85 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 DYDC1Q8WWB3 177 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 PHB2Q99623 299 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 RPRMQ9NS64 109 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 IMP3Q9NV31 184 aaKnown RBP-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 NKIRAS1Q9NYS0 192 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 CUL7Q14999 1698 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 RIMS1Q86UR5 1692 aaKnown RBP-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 PKD1P98161 4303 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 CCDC144AA2RUR9 1427 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 TECPR2O15040 1411 aa-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 CICQ96RK0 1608 aaPredicted RBP-0.57□□□□□ -2.5
RNU4-49P-201ENST00000516080 ANKRD11Q6UB99 2663 aaPredicted RBP-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 SHPRHQ149N8 1683 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 KALRNO60229 2985 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 SHANK2Q9UPX8 1470 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 TMEM114B3SHH9 223 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 H0YAA0 97 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 GABARAPH6UMI1 98 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 M0QZK8 103 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 M0R135 149 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 YPEL1O60688 119 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 ATG12O94817 140 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 PPP1R17O96001 155 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 HBDP02042 147 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 PIRTP0C851 137 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 CEBPGP53567 150 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 MAGOHP61326 146 aaKnown RBP-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 GNG5P63218 68 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 TPM4P67936 248 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 PSPHP78330 225 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 C9orf16Q9BUW7 83 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 LYRM2Q9NU23 88 aaPredicted RBP-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 IL20Q9NYY1 176 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 CALML5Q9NZT1 146 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 METTL1Q9UBP6 276 aaKnown RBP-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 V9GYH0 126 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 TRIOO75962 3097 aa-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 SUPT6HQ7KZ85 1726 aaKnown RBP-0.58□□□□□ -2.5
RNU4-49P-201ENST00000516080 PREX1Q8TCU6 1659 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 UHRF1BP1LA0JNW5 1464 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 A2MP01023 1474 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 NBEAL2Q6ZNJ1 2754 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 RGPD8O14715 1765 aaPredicted RBP-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 RGPD5Q99666 1765 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 TRBV27A0A0K0K1C4 114 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 TRDV1A0A1B0GX56 115 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 HSBP1L1C9JCN9 74 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 H3BMG7 143 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 I3L3M4 83 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 PFDN1O60925 122 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 PITX3O75364 302 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 TPM3P06753 285 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 HSD11B1P28845 292 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 CMPK1P30085 196 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 S100A11P31949 105 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 UBE2D1P51668 147 aa-0.59□□□□□ -2.5
RNU4-49P-201ENST00000516080 CRYBA4P53673 196 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms