RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 SPATA12Q7Z6I5 190 aa3.04□□□□□ -1.92
NUP54-206ENST00000508465 OR10AG1Q8NH19 301 aa3.04□□□□□ -1.92
NUP54-206ENST00000508465 SFRP2Q96HF1 295 aa3.04□□□□□ -1.92
NUP54-206ENST00000508465 TCEAL7Q9BRU2 100 aa3.04□□□□□ -1.92
NUP54-206ENST00000508465 VCX2Q9H322 139 aa3.04□□□□□ -1.92
NUP54-206ENST00000508465 MANBALQ9NQG1 85 aa3.04□□□□□ -1.92
NUP54-206ENST00000508465 VAX2Q9UIW0 290 aa3.04□□□□□ -1.92
NUP54-206ENST00000508465 LY96Q9Y6Y9 160 aa3.04□□□□□ -1.92
NUP54-206ENST00000508465 TRBV20OR9-2A0A075B6H5 130 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 TRAV8-6A0A0B4J262 113 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 IGHV3-38A0A0C4DH36 116 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 DNAH10OSP0CZ25 163 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 BCL2P10415 239 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 EVI2AP22794 236 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 GNG4P50150 75 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 CEBPGP53567 150 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 RPL24P83731 157 aaKnown RBP3.03□□□□□ -1.92
NUP54-206ENST00000508465 MEF2BQ02080 365 aaPredicted RBP3.03□□□□□ -1.92
NUP54-206ENST00000508465 RHOHQ15669 191 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 SPANXN1Q5VSR9 72 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 ZFP2Q6ZN57 461 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 Q6ZRN7 208 aaPredicted RBP3.03□□□□□ -1.92
NUP54-206ENST00000508465 ZFP82Q8N141 532 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 MAPKAPK5-AS1Q8N8E1 139 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 OR2D3Q8NGH3 330 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 DEFB104AQ8WTQ1 72 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 C11orf52Q96A22 123 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 DNAJC30Q96LL9 226 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 GTSF1LQ9H1H1 148 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 Q9HAA7 133 aa3.03□□□□□ -1.92
NUP54-206ENST00000508465 IGLV5-45A0A087WSX0 123 aa3.02□□□□□ -1.93
NUP54-206ENST00000508465 C19orf71A6NCJ1 209 aa3.02□□□□□ -1.93
NUP54-206ENST00000508465 K7EN84 100 aa3.02□□□□□ -1.93
NUP54-206ENST00000508465 PDE6DO43924 150 aa3.02□□□□□ -1.93
NUP54-206ENST00000508465 CIDEAO60543 219 aa3.02□□□□□ -1.93
NUP54-206ENST00000508465 IFNA1P01562 189 aa3.02□□□□□ -1.93
NUP54-206ENST00000508465 TAGLN2P37802 199 aaKnown RBP3.02□□□□□ -1.93
NUP54-206ENST00000508465 DSCR10P59022 87 aa3.02□□□□□ -1.93
NUP54-206ENST00000508465 LELP1Q5T871 98 aa3.02□□□□□ -1.93
NUP54-206ENST00000508465 LYZL1Q6UWQ5 148 aa3.02□□□□□ -1.93
NUP54-206ENST00000508465 DAZ4Q86SG3 579 aaKnown RBP3.02□□□□□ -1.93
NUP54-206ENST00000508465 RNASE7Q9H1E1 156 aaKnown RBP3.02□□□□□ -1.93
NUP54-206ENST00000508465 DAZ3Q9NR90 486 aaKnown RBP3.02□□□□□ -1.93
NUP54-206ENST00000508465 IBA57-AS1B1ANH7 110 aa3.01□□□□□ -1.93
NUP54-206ENST00000508465 TMEM262E9PQX1 116 aa3.01□□□□□ -1.93
NUP54-206ENST00000508465 LECT2O14960 151 aa3.01□□□□□ -1.93
NUP54-206ENST00000508465 P01737 135 aa3.01□□□□□ -1.93
NUP54-206ENST00000508465 MGPP08493 103 aa3.01□□□□□ -1.93
NUP54-206ENST00000508465 OR5AL1P0C617 328 aa3.01□□□□□ -1.93
NUP54-206ENST00000508465 LINC00694P0DN24 101 aa3.01□□□□□ -1.93
NUP54-206ENST00000508465 NTF3P20783 257 aa3.01□□□□□ -1.93
NUP54-206ENST00000508465 FOXA3P55318 350 aaPredicted RBP3.01□□□□□ -1.93
NUP54-206ENST00000508465 RAB4BP61018 213 aa3.01□□□□□ -1.93
NUP54-206ENST00000508465 ZNF56Q15929 161 aa3.01□□□□□ -1.93
NUP54-206ENST00000508465 LINC01556Q5JQF7 62 aa3.01□□□□□ -1.93
NUP54-206ENST00000508465 FER1L6-AS1Q8NA97 138 aa3.01□□□□□ -1.93
NUP54-206ENST00000508465 EIF5A2Q9GZV4 153 aaKnown RBP3.01□□□□□ -1.93
NUP54-206ENST00000508465 KIF25-AS1Q9Y6Z4 181 aa3.01□□□□□ -1.93
NUP54-206ENST00000508465 RYR1P21817 5038 aa3.01□□□□□ -1.93
NUP54-206ENST00000508465 PCLOQ9Y6V0 5065 aa3□□□□□ -1.93
NUP54-206ENST00000508465 LRP1BQ9NZR2 4599 aa3□□□□□ -1.93
NUP54-206ENST00000508465 TRBV7-3A0A075B6L6 115 aa3□□□□□ -1.93
NUP54-206ENST00000508465 A0A087WTM6 91 aa3□□□□□ -1.93
NUP54-206ENST00000508465 A0A087WWC5 75 aa3□□□□□ -1.93
NUP54-206ENST00000508465 XKRY2A2RUG3 117 aa3□□□□□ -1.93
NUP54-206ENST00000508465 LRCOL1A6NCL2 159 aa3□□□□□ -1.93
NUP54-206ENST00000508465 C9JQL5 133 aa3□□□□□ -1.93
NUP54-206ENST00000508465 H0Y8G0 127 aa3□□□□□ -1.93
NUP54-206ENST00000508465 SNAI2O43623 268 aa3□□□□□ -1.93
NUP54-206ENST00000508465 PSCAO43653 123 aa3□□□□□ -1.93
NUP54-206ENST00000508465 CXCL1P09341 107 aa3□□□□□ -1.93
NUP54-206ENST00000508465 IGLC6P0CF74 106 aa3□□□□□ -1.93
NUP54-206ENST00000508465 SMIM17P0DL12 118 aa3□□□□□ -1.93
NUP54-206ENST00000508465 KRTAP10-1P60331 282 aa3□□□□□ -1.93
NUP54-206ENST00000508465 KRTAP10-8P60410 259 aa3□□□□□ -1.93
NUP54-206ENST00000508465 RPS20P60866 119 aaKnown RBP3□□□□□ -1.93
NUP54-206ENST00000508465 UBE2D3P61077 147 aa3□□□□□ -1.93
NUP54-206ENST00000508465 UBE2D2P62837 147 aa3□□□□□ -1.93
NUP54-206ENST00000508465 HAMPP81172 84 aa3□□□□□ -1.93
NUP54-206ENST00000508465 GAGE6Q13070 117 aa3□□□□□ -1.93
NUP54-206ENST00000508465 WFDC2Q14508 124 aa3□□□□□ -1.93
NUP54-206ENST00000508465 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
NUP54-206ENST00000508465 NTM-AS1Q6ZSK4 140 aa3□□□□□ -1.93
NUP54-206ENST00000508465 LYPD6BQ8NI32 183 aa3□□□□□ -1.93
NUP54-206ENST00000508465 BAALCQ8WXS3 180 aa3□□□□□ -1.93
NUP54-206ENST00000508465 PGLYRP4Q96LB8 373 aa3□□□□□ -1.93
NUP54-206ENST00000508465 KLK12Q9UKR0 248 aa3□□□□□ -1.93
NUP54-206ENST00000508465 HSPG2P98160 4391 aa3□□□□□ -1.93
NUP54-206ENST00000508465 A0A087WX48 190 aa2.99□□□□□ -1.93
NUP54-206ENST00000508465 IGLV9-49A0A0B4J1Y8 123 aa2.99□□□□□ -1.93
NUP54-206ENST00000508465 TRAV26-2A0A0B4J265 109 aa2.99□□□□□ -1.93
NUP54-206ENST00000508465 TRBV10-1A0A0K0K1A3 114 aa2.99□□□□□ -1.93
NUP54-206ENST00000508465 F2Z2F3 143 aa2.99□□□□□ -1.93
NUP54-206ENST00000508465 M0QY20 66 aa2.99□□□□□ -1.93
NUP54-206ENST00000508465 GATCO43716 136 aaKnown RBP2.99□□□□□ -1.93
NUP54-206ENST00000508465 CDK2AP2O75956 126 aa2.99□□□□□ -1.93
NUP54-206ENST00000508465 SRP19P09132 144 aaKnown RBP2.99□□□□□ -1.93
NUP54-206ENST00000508465 CACNG7P62955 275 aa2.99□□□□□ -1.93
NUP54-206ENST00000508465 NIT1Q86X76 327 aa2.99□□□□□ -1.93
NUP54-206ENST00000508465 C10orf126Q8N4M7 172 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms