RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 LRRK2Q5S007 2527 aa1.55□□□□□ -2.16
TRAPPC13-208ENST00000505553 AKAP13Q12802 2813 aa1.55□□□□□ -2.16
TRAPPC13-208ENST00000505553 POLQO75417 2590 aa1.55□□□□□ -2.16
TRAPPC13-208ENST00000505553 PATJQ8NI35 1801 aa1.55□□□□□ -2.16
TRAPPC13-208ENST00000505553 NBEAQ8NFP9 2946 aa1.55□□□□□ -2.16
TRAPPC13-208ENST00000505553 LINC00694P0DN24 101 aa1.55□□□□□ -2.16
TRAPPC13-208ENST00000505553 RPS25P62851 125 aaKnown RBP1.55□□□□□ -2.16
TRAPPC13-208ENST00000505553 KRTAP21-3Q3LHN1 58 aa1.55□□□□□ -2.16
TRAPPC13-208ENST00000505553 LINC00322Q6ZN03 302 aaPredicted RBP1.55□□□□□ -2.16
TRAPPC13-208ENST00000505553 TCTEX1D1Q8N7M0 179 aa1.55□□□□□ -2.16
TRAPPC13-208ENST00000505553 LINC00526Q96FQ7 95 aa1.55□□□□□ -2.16
TRAPPC13-208ENST00000505553 MYH1P12882 1939 aa1.55□□□□□ -2.16
TRAPPC13-208ENST00000505553 FRYLO94915 3013 aa1.55□□□□□ -2.16
TRAPPC13-208ENST00000505553 URB1O60287 2271 aaKnown RBP1.54□□□□□ -2.16
TRAPPC13-208ENST00000505553 DOPEY2Q9Y3R5 2298 aa1.54□□□□□ -2.16
TRAPPC13-208ENST00000505553 ABCA2Q9BZC7 2435 aa1.54□□□□□ -2.16
TRAPPC13-208ENST00000505553 RP1P56715 2156 aa1.54□□□□□ -2.16
TRAPPC13-208ENST00000505553 PLXNA4Q9HCM2 1894 aa1.54□□□□□ -2.16
TRAPPC13-208ENST00000505553 TPST1O60507 370 aa1.54□□□□□ -2.16
TRAPPC13-208ENST00000505553 ZNF25P17030 456 aaPredicted RBP1.54□□□□□ -2.16
TRAPPC13-208ENST00000505553 COPZ1P61923 177 aa1.54□□□□□ -2.16
TRAPPC13-208ENST00000505553 CLLU1Q5K131 121 aa1.54□□□□□ -2.16
TRAPPC13-208ENST00000505553 C5orf17Q8NAS9 161 aa1.54□□□□□ -2.16
TRAPPC13-208ENST00000505553 C1orf54Q8WWF1 131 aa1.54□□□□□ -2.16
TRAPPC13-208ENST00000505553 ERG28Q9UKR5 140 aa1.54□□□□□ -2.16
TRAPPC13-208ENST00000505553 PARP14Q460N5 1801 aa1.54□□□□□ -2.16
TRAPPC13-208ENST00000505553 KALRNO60229 2985 aa1.53□□□□□ -2.16
TRAPPC13-208ENST00000505553 SDK1Q7Z5N4 2213 aa1.53□□□□□ -2.16
TRAPPC13-208ENST00000505553 SETD2Q9BYW2 2564 aaPredicted RBP1.53□□□□□ -2.16
TRAPPC13-208ENST00000505553 FOCADQ5VW36 1801 aa1.53□□□□□ -2.16
TRAPPC13-208ENST00000505553 CACNA1EQ15878 2313 aa1.53□□□□□ -2.16
TRAPPC13-208ENST00000505553 PCDH15Q96QU1 1955 aa1.53□□□□□ -2.16
TRAPPC13-208ENST00000505553 JMJD7-PLA2G4BH0Y9G9 81 aa1.53□□□□□ -2.16
TRAPPC13-208ENST00000505553 K7EP13 123 aa1.53□□□□□ -2.16
TRAPPC13-208ENST00000505553 C3orf62Q6ZUJ4 267 aa1.53□□□□□ -2.16
TRAPPC13-208ENST00000505553 ATOH7Q8N100 152 aa1.53□□□□□ -2.16
TRAPPC13-208ENST00000505553 LPAR5Q9H1C0 372 aa1.53□□□□□ -2.16
TRAPPC13-208ENST00000505553 SAR1AQ9NR31 198 aa1.53□□□□□ -2.16
TRAPPC13-208ENST00000505553 ZFP30Q9Y2G7 519 aa1.53□□□□□ -2.16
TRAPPC13-208ENST00000505553 COL6A6A6NMZ7 2263 aa1.53□□□□□ -2.16
TRAPPC13-208ENST00000505553 FBN2P35556 2912 aa1.53□□□□□ -2.16
TRAPPC13-208ENST00000505553 NAV3Q8IVL0 2385 aa1.53□□□□□ -2.16
TRAPPC13-208ENST00000505553 TLN1Q9Y490 2541 aaKnown RBP1.53□□□□□ -2.16
TRAPPC13-208ENST00000505553 CR1P17927 2039 aa1.53□□□□□ -2.17
TRAPPC13-208ENST00000505553 BAZ2BQ9UIF8 2168 aaKnown RBP1.53□□□□□ -2.17
TRAPPC13-208ENST00000505553 PCNX1Q96RV3 2341 aa1.53□□□□□ -2.17
TRAPPC13-208ENST00000505553 MYH8P13535 1937 aa1.52□□□□□ -2.17
TRAPPC13-208ENST00000505553 CEP192Q8TEP8 1941 aa1.52□□□□□ -2.17
TRAPPC13-208ENST00000505553 TRBV20-1A0A075B6N2 111 aa1.52□□□□□ -2.17
TRAPPC13-208ENST00000505553 NPFFO15130 113 aa1.52□□□□□ -2.17
TRAPPC13-208ENST00000505553 PPYP01298 95 aa1.52□□□□□ -2.17
TRAPPC13-208ENST00000505553 IDO2Q6ZQW0 420 aa1.52□□□□□ -2.17
TRAPPC13-208ENST00000505553 PLPP5Q8NEB5 264 aa1.52□□□□□ -2.17
TRAPPC13-208ENST00000505553 USP9YO00507 2555 aaPredicted RBP1.52□□□□□ -2.17
TRAPPC13-208ENST00000505553 PCNX2A6NKB5 2137 aa1.52□□□□□ -2.17
TRAPPC13-208ENST00000505553 LAMA4Q16363 1823 aa1.52□□□□□ -2.17
TRAPPC13-208ENST00000505553 SPTBN1Q01082 2364 aaKnown RBP1.52□□□□□ -2.17
TRAPPC13-208ENST00000505553 DMXL2Q8TDJ6 3036 aa1.52□□□□□ -2.17
TRAPPC13-208ENST00000505553 LAMA5O15230 3695 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 SPG11Q96JI7 2443 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 AHCTF1Q8WYP5 2266 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 MTORP42345 2549 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 TSC2P49815 1807 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 F5P12259 2224 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 A0A0J9YY99 117 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 FAM236AA0A1B0GUQ0 79 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 FAM236BA0A1B0GV22 79 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 A0A1W2PPB8 328 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 A0A1W2PRS3 328 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 A6NN06 94 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 KIR3DP1A8MWS1 328 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 ADCYAP1P18509 176 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 SELENOWP63302 87 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 SPRNQ5BIV9 151 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 ATP6V0E2Q8NHE4 81 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 C10orf105Q8TEF2 133 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 ARL11Q969Q4 196 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 CRCT1Q9UGL9 99 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 LSM2Q9Y333 95 aaKnown RBP1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 PLIN4Q96Q06 1357 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 POLEQ07864 2286 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 F8P00451 2351 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 LOC400499M0QZD8 3231 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 FREM1Q5H8C1 2179 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 ALPK2Q86TB3 2170 aa1.51□□□□□ -2.17
TRAPPC13-208ENST00000505553 MUC22E2RYF6 1773 aaPredicted RBP1.5□□□□□ -2.17
TRAPPC13-208ENST00000505553 ZNF670-ZNF695F2Z2N8 137 aa1.5□□□□□ -2.17
TRAPPC13-208ENST00000505553 M0R2P5 195 aa1.5□□□□□ -2.17
TRAPPC13-208ENST00000505553 CDC42EP2O14613 210 aa1.5□□□□□ -2.17
TRAPPC13-208ENST00000505553 RPL13AP3Q6NVV1 102 aa1.5□□□□□ -2.17
TRAPPC13-208ENST00000505553 ATP11AUNQ6ZP68 121 aa1.5□□□□□ -2.17
TRAPPC13-208ENST00000505553 SNX29P2Q8IUI4 249 aa1.5□□□□□ -2.17
TRAPPC13-208ENST00000505553 OBSCN-AS1Q96MR7 158 aa1.5□□□□□ -2.17
TRAPPC13-208ENST00000505553 TMEM191AQ9H0A3 160 aa1.5□□□□□ -2.17
TRAPPC13-208ENST00000505553 TAS2R8Q9NYW2 309 aa1.5□□□□□ -2.17
TRAPPC13-208ENST00000505553 NOP16Q9Y3C1 178 aaKnown RBP1.5□□□□□ -2.17
TRAPPC13-208ENST00000505553 SPAG17Q6Q759 2223 aa1.5□□□□□ -2.17
TRAPPC13-208ENST00000505553 ASCC3Q8N3C0 2202 aaKnown RBP1.5□□□□□ -2.17
TRAPPC13-208ENST00000505553 FLNCQ14315 2725 aa1.5□□□□□ -2.17
TRAPPC13-208ENST00000505553 TRAV2A0A0B4J234 112 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms