RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 RRN3P1Q2M238 152 aa17.64■□□□□ 0.41
DHFR-203ENST00000505337 NOP10Q9NPE3 64 aaKnown RBP17.64■□□□□ 0.41
DHFR-203ENST00000505337 PRSS29PA6NIE9 313 aa17.64■□□□□ 0.41
DHFR-203ENST00000505337 TCTAP57738 103 aa17.64■□□□□ 0.41
DHFR-203ENST00000505337 WFDC9Q8NEX5 89 aa17.64■□□□□ 0.41
DHFR-203ENST00000505337 IGKV2D-26A0A0A0MRZ7 120 aa17.63■□□□□ 0.41
DHFR-203ENST00000505337 A0A1B0GV90 55 aa17.63■□□□□ 0.41
DHFR-203ENST00000505337 DLEU1O43261 78 aa17.63■□□□□ 0.41
DHFR-203ENST00000505337 ZNF479Q96JC4 524 aa17.63■□□□□ 0.41
DHFR-203ENST00000505337 OVOL2Q9BRP0 275 aa17.63■□□□□ 0.41
DHFR-203ENST00000505337 BATFQ16520 125 aa17.62■□□□□ 0.41
DHFR-203ENST00000505337 SAMD5Q5TGI4 173 aa17.62■□□□□ 0.41
DHFR-203ENST00000505337 WIPF1O43516 503 aa17.61■□□□□ 0.41
DHFR-203ENST00000505337 NMUP48645 174 aa17.61■□□□□ 0.41
DHFR-203ENST00000505337 PMVKQ15126 192 aa17.61■□□□□ 0.41
DHFR-203ENST00000505337 PCP2Q8IVA1 136 aa17.61■□□□□ 0.41
DHFR-203ENST00000505337 OXLD1Q5BKU9 147 aa17.6■□□□□ 0.41
DHFR-203ENST00000505337 DNAH3Q8TD57 4116 aa17.59■□□□□ 0.41
DHFR-203ENST00000505337 HINT1P49773 126 aaPredicted RBP17.59■□□□□ 0.41
DHFR-203ENST00000505337 IGLV4-69A0A075B6H9 119 aa17.58■□□□□ 0.41
DHFR-203ENST00000505337 CST9LQ9H4G1 147 aa17.58■□□□□ 0.4
DHFR-203ENST00000505337 K7EQD1 137 aa17.57■□□□□ 0.4
DHFR-203ENST00000505337 KPRPQ5T749 579 aaPredicted RBP17.57■□□□□ 0.4
DHFR-203ENST00000505337 TRBV10-1A0A0K0K1A3 114 aa17.56■□□□□ 0.4
DHFR-203ENST00000505337 MPV17L2Q567V2 206 aa17.56■□□□□ 0.4
DHFR-203ENST00000505337 COL5A1-AS1Q5SY13 56 aa17.56■□□□□ 0.4
DHFR-203ENST00000505337 CHCHD7Q9BUK0 85 aa17.56■□□□□ 0.4
DHFR-203ENST00000505337 SIVA1O15304 175 aa17.55■□□□□ 0.4
DHFR-203ENST00000505337 PYGO1Q9Y3Y4 419 aa17.55■□□□□ 0.4
DHFR-203ENST00000505337 GAGE12BA1L429 117 aa17.55■□□□□ 0.4
DHFR-203ENST00000505337 GAGE7O76087 117 aa17.55■□□□□ 0.4
DHFR-203ENST00000505337 GAGE12FP0CL80 117 aa17.55■□□□□ 0.4
DHFR-203ENST00000505337 GAGE12GP0CL81 117 aa17.55■□□□□ 0.4
DHFR-203ENST00000505337 GAGE12IP0CL82 117 aa17.55■□□□□ 0.4
DHFR-203ENST00000505337 PRKDCP78527 4128 aaKnown RBP17.55■□□□□ 0.4
DHFR-203ENST00000505337 IGLV4-3A0A075B6K6 122 aa17.53■□□□□ 0.4
DHFR-203ENST00000505337 CIDEAO60543 219 aa17.53■□□□□ 0.4
DHFR-203ENST00000505337 PAPPA-AS1Q5QFB9 102 aa17.53■□□□□ 0.4
DHFR-203ENST00000505337 X6R8D5 127 aa17.53■□□□□ 0.4
DHFR-203ENST00000505337 TRBV7-3A0A075B6L6 115 aa17.52■□□□□ 0.4
DHFR-203ENST00000505337 C11orf86A6NJI1 115 aa17.52■□□□□ 0.4
DHFR-203ENST00000505337 BVES-AS1Q5T3Y7 98 aa17.52■□□□□ 0.4
DHFR-203ENST00000505337 SLC25A29Q8N8R3 303 aa17.52■□□□□ 0.4
DHFR-203ENST00000505337 PHLDA1Q8WV24 401 aaPredicted RBP17.52■□□□□ 0.4
DHFR-203ENST00000505337 OPRPNQ99935 248 aaPredicted RBP17.52■□□□□ 0.4
DHFR-203ENST00000505337 TTTY13Q9BZ97 58 aa17.52■□□□□ 0.4
DHFR-203ENST00000505337 TRGV2A0A075B6R0 118 aa17.52■□□□□ 0.39
DHFR-203ENST00000505337 IGHV3-38A0A0C4DH36 116 aa17.52■□□□□ 0.39
DHFR-203ENST00000505337 COTL1Q14019 142 aa17.52■□□□□ 0.39
DHFR-203ENST00000505337 ZNRF2Q8NHG8 242 aa17.52■□□□□ 0.39
DHFR-203ENST00000505337 KIR2DL5BQ8NHK3 375 aa17.52■□□□□ 0.39
DHFR-203ENST00000505337 FAM104AQ969W3 186 aa17.52■□□□□ 0.39
DHFR-203ENST00000505337 NPSP0C0P6 89 aa17.51■□□□□ 0.39
DHFR-203ENST00000505337 RPL36AP83881 106 aaKnown RBP17.5■□□□□ 0.39
DHFR-203ENST00000505337 LINC00612Q8N6U2 182 aa17.5■□□□□ 0.39
DHFR-203ENST00000505337 RPL36ALQ969Q0 106 aaKnown RBP17.5■□□□□ 0.39
DHFR-203ENST00000505337 SMIM9A6NGZ8 99 aa17.5■□□□□ 0.39
DHFR-203ENST00000505337 E9PLD3 99 aa17.49■□□□□ 0.39
DHFR-203ENST00000505337 PRB2P02812 416 aaPredicted RBP17.49■□□□□ 0.39
DHFR-203ENST00000505337 TMEM97Q5BJF2 176 aa17.49■□□□□ 0.39
DHFR-203ENST00000505337 CRYBA4P53673 196 aa17.48■□□□□ 0.39
DHFR-203ENST00000505337 EMP1P54849 157 aa17.48■□□□□ 0.39
DHFR-203ENST00000505337 UBE2D3P61077 147 aa17.48■□□□□ 0.39
DHFR-203ENST00000505337 UBE2D2P62837 147 aa17.48■□□□□ 0.39
DHFR-203ENST00000505337 NFE4Q86UQ8 179 aa17.48■□□□□ 0.39
DHFR-203ENST00000505337 SPANXA1Q9NS26 97 aa17.48■□□□□ 0.39
DHFR-203ENST00000505337 HIGD1BQ9P298 99 aa17.48■□□□□ 0.39
DHFR-203ENST00000505337 UBE2D4Q9Y2X8 147 aa17.48■□□□□ 0.39
DHFR-203ENST00000505337 TRBV6-4A0A1B0GX49 114 aa17.47■□□□□ 0.39
DHFR-203ENST00000505337 APOC4P55056 127 aa17.47■□□□□ 0.39
DHFR-203ENST00000505337 AMELXQ99217 191 aa17.47■□□□□ 0.39
DHFR-203ENST00000505337 DAZ4Q86SG3 579 aaKnown RBP17.46■□□□□ 0.39
DHFR-203ENST00000505337 DAZ3Q9NR90 486 aaKnown RBP17.46■□□□□ 0.39
DHFR-203ENST00000505337 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.45■□□□□ 0.38
DHFR-203ENST00000505337 IGKV2-29A2NJV5 120 aaPredicted RBP17.45■□□□□ 0.38
DHFR-203ENST00000505337 HSD52Q0P140 79 aa17.45■□□□□ 0.38
DHFR-203ENST00000505337 MAPKAPK5-AS1Q8N8E1 139 aa17.45■□□□□ 0.38
DHFR-203ENST00000505337 OR11H2Q8NH07 326 aa17.45■□□□□ 0.38
DHFR-203ENST00000505337 VCX2Q9H322 139 aa17.45■□□□□ 0.38
DHFR-203ENST00000505337 ZMAT5Q9UDW3 170 aaKnown RBP17.45■□□□□ 0.38
DHFR-203ENST00000505337 TRBV25-1A0A075B6N4 114 aa17.44■□□□□ 0.38
DHFR-203ENST00000505337 TRAV8-6A0A0B4J262 113 aa17.44■□□□□ 0.38
DHFR-203ENST00000505337 CEMP1Q6PRD7 247 aaPredicted RBP17.44■□□□□ 0.38
DHFR-203ENST00000505337 PRADC1Q9BSG0 188 aa17.44■□□□□ 0.38
DHFR-203ENST00000505337 FHL2Q14192 279 aa17.44■□□□□ 0.38
DHFR-203ENST00000505337 CHAC1Q9BUX1 264 aa17.44■□□□□ 0.38
DHFR-203ENST00000505337 GAGE12JA6NER3 117 aa17.43■□□□□ 0.38
DHFR-203ENST00000505337 KRTAP10-11P60412 298 aa17.43■□□□□ 0.38
DHFR-203ENST00000505337 GAGE1Q13065 139 aa17.43■□□□□ 0.38
DHFR-203ENST00000505337 GAGE4Q13068 117 aa17.43■□□□□ 0.38
DHFR-203ENST00000505337 GAGE5Q13069 117 aa17.43■□□□□ 0.38
DHFR-203ENST00000505337 DEFB135Q30KP9 77 aa17.43■□□□□ 0.38
DHFR-203ENST00000505337 GAGE13Q4V321 117 aa17.43■□□□□ 0.38
DHFR-203ENST00000505337 TRGV4A0A0C4DH28 118 aa17.42■□□□□ 0.38
DHFR-203ENST00000505337 TIMM21Q9BVV7 248 aa17.42■□□□□ 0.38
DHFR-203ENST00000505337 HERVK_113P61574 105 aa17.41■□□□□ 0.38
DHFR-203ENST00000505337 NTM-AS1Q6ZSK4 140 aa17.41■□□□□ 0.38
DHFR-203ENST00000505337 TGP01266 2768 aa17.41■□□□□ 0.38
DHFR-203ENST00000505337 EGFEM1PQ0D2K5 195 aa17.41■□□□□ 0.38
DHFR-203ENST00000505337 LINC00694P0DN24 101 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms