RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 CSMD1Q96PZ7 3565 aa4.17□□□□□ -1.74
PHC3-217ENST00000497658 ANKRD11Q6UB99 2663 aaPredicted RBP4.17□□□□□ -1.74
PHC3-217ENST00000497658 CCL21O00585 134 aa4.17□□□□□ -1.74
PHC3-217ENST00000497658 CD28P10747 220 aa4.17□□□□□ -1.74
PHC3-217ENST00000497658 SNRPD3P62318 126 aaKnown RBP4.17□□□□□ -1.74
PHC3-217ENST00000497658 PIK3CD-AS1Q5SR53 167 aa4.17□□□□□ -1.74
PHC3-217ENST00000497658 ADAMTSL4-AS1Q5T5F5 129 aa4.17□□□□□ -1.74
PHC3-217ENST00000497658 ACACAQ13085 2346 aa4.16□□□□□ -1.74
PHC3-217ENST00000497658 LMO4P61968 165 aa4.16□□□□□ -1.74
PHC3-217ENST00000497658 LINC00643Q86TS7 51 aa4.16□□□□□ -1.74
PHC3-217ENST00000497658 PPDPFQ9H3Y8 114 aa4.16□□□□□ -1.74
PHC3-217ENST00000497658 ZNF580Q9UK33 172 aa4.16□□□□□ -1.74
PHC3-217ENST00000497658 H3BS24 57 aa4.15□□□□□ -1.74
PHC3-217ENST00000497658 CXCL5P42830 114 aa4.15□□□□□ -1.74
PHC3-217ENST00000497658 SDIM1Q6ZPB5 146 aa4.15□□□□□ -1.74
PHC3-217ENST00000497658 TMEM219Q86XT9 240 aa4.15□□□□□ -1.74
PHC3-217ENST00000497658 DEFB104AQ8WTQ1 72 aa4.15□□□□□ -1.74
PHC3-217ENST00000497658 DUX3Q96PT4 197 aa4.15□□□□□ -1.74
PHC3-217ENST00000497658 PRORYQ9H606 182 aa4.15□□□□□ -1.74
PHC3-217ENST00000497658 LINC00527Q9UJ94 153 aa4.15□□□□□ -1.74
PHC3-217ENST00000497658 TNFRSF18Q9Y5U5 241 aa4.15□□□□□ -1.74
PHC3-217ENST00000497658 IGKV3-7A0A075B6H7 116 aa4.15□□□□□ -1.75
PHC3-217ENST00000497658 TRAV8-3A0A0A6YYJ7 113 aa4.15□□□□□ -1.75
PHC3-217ENST00000497658 K7ENP7 123 aa4.15□□□□□ -1.75
PHC3-217ENST00000497658 COX7A2LO14548 114 aa4.15□□□□□ -1.75
PHC3-217ENST00000497658 NDUFA1O15239 70 aa4.15□□□□□ -1.75
PHC3-217ENST00000497658 PF4V1P10720 104 aa4.15□□□□□ -1.75
PHC3-217ENST00000497658 TIRAPP58753 221 aa4.15□□□□□ -1.75
PHC3-217ENST00000497658 TMEM95Q3KNT9 176 aa4.15□□□□□ -1.75
PHC3-217ENST00000497658 CLEC2BQ92478 149 aa4.15□□□□□ -1.75
PHC3-217ENST00000497658 FAM104AQ969W3 186 aa4.15□□□□□ -1.75
PHC3-217ENST00000497658 CHCHD5Q9BSY4 110 aa4.15□□□□□ -1.75
PHC3-217ENST00000497658 DMXL1Q9Y485 3027 aa4.15□□□□□ -1.75
PHC3-217ENST00000497658 IGLV5-45A0A087WSX0 123 aa4.14□□□□□ -1.75
PHC3-217ENST00000497658 UQCRQO14949 82 aa4.14□□□□□ -1.75
PHC3-217ENST00000497658 IGHV3-11P01762 117 aa4.14□□□□□ -1.75
PHC3-217ENST00000497658 TRACP01848 142 aa4.14□□□□□ -1.75
PHC3-217ENST00000497658 UBE2D4Q9Y2X8 147 aa4.14□□□□□ -1.75
PHC3-217ENST00000497658 CACNA1BQ00975 2339 aa4.14□□□□□ -1.75
PHC3-217ENST00000497658 ATMQ13315 3056 aa4.14□□□□□ -1.75
PHC3-217ENST00000497658 FAM236AA0A1B0GUQ0 79 aa4.14□□□□□ -1.75
PHC3-217ENST00000497658 FAM236BA0A1B0GV22 79 aa4.14□□□□□ -1.75
PHC3-217ENST00000497658 INAFM2P0DMQ5 153 aa4.14□□□□□ -1.75
PHC3-217ENST00000497658 ADORA2A-AS1P86434 159 aa4.14□□□□□ -1.75
PHC3-217ENST00000497658 FAM222AQ5U5X8 452 aa4.14□□□□□ -1.75
PHC3-217ENST00000497658 C3orf22Q8N5N4 141 aa4.14□□□□□ -1.75
PHC3-217ENST00000497658 DAND5Q8N907 189 aa4.14□□□□□ -1.75
PHC3-217ENST00000497658 DNAJC30Q96LL9 226 aa4.14□□□□□ -1.75
PHC3-217ENST00000497658 LINC01587Q99440 93 aa4.14□□□□□ -1.75
PHC3-217ENST00000497658 BPESC1Q9GZL8 116 aa4.14□□□□□ -1.75
PHC3-217ENST00000497658 PEMTQ9UBM1 199 aa4.14□□□□□ -1.75
PHC3-217ENST00000497658 LRBAP50851 2863 aa4.13□□□□□ -1.75
PHC3-217ENST00000497658 DCHS2Q6V1P9 2916 aa4.13□□□□□ -1.75
PHC3-217ENST00000497658 TMEM89A2RUT3 159 aa4.13□□□□□ -1.75
PHC3-217ENST00000497658 A6NDX4 124 aa4.13□□□□□ -1.75
PHC3-217ENST00000497658 K7EQG2 157 aa4.13□□□□□ -1.75
PHC3-217ENST00000497658 HERVK_113P63121 156 aa4.13□□□□□ -1.75
PHC3-217ENST00000497658 CFHR3Q02985 330 aa4.13□□□□□ -1.75
PHC3-217ENST00000497658 LINC00526Q96FQ7 95 aa4.13□□□□□ -1.75
PHC3-217ENST00000497658 CITED2Q99967 270 aaPredicted RBP4.13□□□□□ -1.75
PHC3-217ENST00000497658 PRRC2AP48634 2157 aaKnown RBP4.13□□□□□ -1.75
PHC3-217ENST00000497658 TRAV12-2A0A075B6T6 113 aa4.12□□□□□ -1.75
PHC3-217ENST00000497658 IGLV5-39A0A0G2JS06 123 aa4.12□□□□□ -1.75
PHC3-217ENST00000497658 FAM19A3Q7Z5A8 133 aa4.12□□□□□ -1.75
PHC3-217ENST00000497658 LINC00308Q8TCZ7 52 aa4.12□□□□□ -1.75
PHC3-217ENST00000497658 CHCHD7Q9BUK0 85 aa4.12□□□□□ -1.75
PHC3-217ENST00000497658 NDUFA7O95182 113 aa4.12□□□□□ -1.75
PHC3-217ENST00000497658 ZNF415Q09FC8 603 aa4.12□□□□□ -1.75
PHC3-217ENST00000497658 CDSNQ15517 529 aa4.12□□□□□ -1.75
PHC3-217ENST00000497658 SPINK13Q1W4C9 94 aa4.12□□□□□ -1.75
PHC3-217ENST00000497658 C9orf153Q5TBE3 101 aa4.12□□□□□ -1.75
PHC3-217ENST00000497658 C5orf38Q86SI9 138 aa4.12□□□□□ -1.75
PHC3-217ENST00000497658 OVOL2Q9BRP0 275 aa4.12□□□□□ -1.75
PHC3-217ENST00000497658 SPTBN2O15020 2390 aa4.12□□□□□ -1.75
PHC3-217ENST00000497658 A0A1B0GX51 115 aa4.11□□□□□ -1.75
PHC3-217ENST00000497658 PSMB8P28062 276 aa4.11□□□□□ -1.75
PHC3-217ENST00000497658 NPC2P61916 151 aa4.11□□□□□ -1.75
PHC3-217ENST00000497658 DAZ2Q13117 558 aaKnown RBP4.11□□□□□ -1.75
PHC3-217ENST00000497658 CEMP1Q6PRD7 247 aaPredicted RBP4.11□□□□□ -1.75
PHC3-217ENST00000497658 Q6ZSV7 163 aa4.11□□□□□ -1.75
PHC3-217ENST00000497658 DAZ4Q86SG3 579 aaKnown RBP4.11□□□□□ -1.75
PHC3-217ENST00000497658 NRGNQ92686 78 aa4.11□□□□□ -1.75
PHC3-217ENST00000497658 DAZ3Q9NR90 486 aaKnown RBP4.11□□□□□ -1.75
PHC3-217ENST00000497658 CDKN2A-AS1Q9UH64 79 aa4.11□□□□□ -1.75
PHC3-217ENST00000497658 GVINP1Q7Z2Y8 2422 aa4.11□□□□□ -1.75
PHC3-217ENST00000497658 TLN1Q9Y490 2541 aaKnown RBP4.11□□□□□ -1.75
PHC3-217ENST00000497658 ZNF292O60281 2723 aa4.11□□□□□ -1.75
PHC3-217ENST00000497658 H3BUX3 64 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 IGKV3-20P01619 116 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 BAALC-AS2P0C853 105 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 COX7CP15954 63 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 RPS28P62857 69 aaKnown RBP4.1□□□□□ -1.75
PHC3-217ENST00000497658 BLCAPP62952 87 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 KLRB1Q12918 225 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 BEAN1Q3B7T3 259 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 HIST2H2BCQ6DN03 193 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 HIST2H2BDQ6DRA6 164 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 DGAT2L7PQ6IED9 249 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 BRD3OSQ6XYD6 125 aa4.1□□□□□ -1.75
PHC3-217ENST00000497658 LRRC75A-AS1Q8N1F1 130 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms