RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 CLEC19AQ6UXS0 136 aa2.77□□□□□ -1.97
HMGB3P14-201ENST00000494195 PRNTQ86SH4 94 aa2.77□□□□□ -1.97
HMGB3P14-201ENST00000494195 BAGE3Q86Y29 109 aa2.77□□□□□ -1.97
HMGB3P14-201ENST00000494195 EXOC3-AS1Q8N2X6 119 aa2.77□□□□□ -1.97
HMGB3P14-201ENST00000494195 TMEM86BQ8N661 226 aa2.77□□□□□ -1.97
HMGB3P14-201ENST00000494195 NUP35Q8NFH5 326 aa2.77□□□□□ -1.97
HMGB3P14-201ENST00000494195 BORCS7Q96B45 105 aa2.77□□□□□ -1.97
HMGB3P14-201ENST00000494195 VPREB3Q9UKI3 123 aa2.77□□□□□ -1.97
HMGB3P14-201ENST00000494195 ZZEF1O43149 2961 aa2.77□□□□□ -1.97
HMGB3P14-201ENST00000494195 CADP27708 2225 aa2.77□□□□□ -1.97
HMGB3P14-201ENST00000494195 DSPP15924 2871 aaKnown RBP2.77□□□□□ -1.97
HMGB3P14-201ENST00000494195 ESPL1Q14674 2120 aa2.77□□□□□ -1.97
HMGB3P14-201ENST00000494195 PLCE1Q9P212 2302 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 PKD1L2Q7Z442 2459 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 RP1L1Q8IWN7 2480 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 TRAV8-1A0A0A6YYK1 113 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 F2Z2F3 143 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 TSTD3H0UI37 97 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 M0QXV9 152 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 KALRNO60229 2985 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 HSBP1O75506 76 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 GZMBP10144 247 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 ZNF25P17030 456 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 PMCHP20382 165 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 PSMB8P28062 276 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 PKIAP61925 76 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 SLC35B1P78383 322 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 HIST1H1AQ02539 215 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 MRPL54Q6P161 138 aaKnown RBP2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 GPHB5Q86YW7 130 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 Q8N2B8 174 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 SIGLECL1Q8N7X8 197 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 MYOZ3Q8TDC0 251 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 ORAOV1Q8WV07 137 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 CHCHD1Q96BP2 118 aaKnown RBP2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 ZC2HC1AQ96GY0 325 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 CNFNQ9BYD5 112 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 LAMTOR2Q9Y2Q5 125 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 UFC1Q9Y3C8 167 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 DOPEY1Q5JWR5 2465 aa2.76□□□□□ -1.97
HMGB3P14-201ENST00000494195 TMEM189A5PLL7 270 aa2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 FABP5P3A8MUU1 101 aa2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 H3BQ85 93 aa2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 M0R3E3 92 aa2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 OVOL1O14753 267 aa2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 SH2D1AO60880 128 aa2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 PRB1P04280 392 aa2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 GPX1P07203 203 aa2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 OR5AL1P0C617 328 aa2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 SRIP30626 198 aa2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 FUSP35637 526 aaKnown RBP eCLIP2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 DEFB112Q30KQ8 113 aa2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 TMEM78Q5T7P6 136 aa2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 LINC00322Q6ZN03 302 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 TCF24Q7RTU0 167 aa2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 MRPL52Q86TS9 123 aaKnown RBP2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 MUC7Q8TAX7 377 aa2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 C18orf32Q8TCD1 76 aa2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 TMEM208Q9BTX3 173 aa2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 DSCAML1Q8TD84 2053 aa2.75□□□□□ -1.97
HMGB3P14-201ENST00000494195 USF3Q68DE3 2245 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 ARFGEF3Q5TH69 2177 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 MALRD1Q5VYJ5 2156 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 SPTBN2O15020 2390 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 IGKV2-40A0A087WW87 121 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 TRAV2A0A0B4J234 112 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 TRAV8-2A0A0B4J237 113 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 C20orf202A1L168 122 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 GRIFINA4D1Z8 144 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 OR11H12B2RN74 326 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 C3orf84H3BNL1 204 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 J3QKU1 62 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 SPINK4O60575 86 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 IGKV2D-40P01614 121 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 LGALS1P09382 135 aaKnown RBP2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 IGLC6P0CF74 106 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 CRIP1P50238 77 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 BLCAPP62952 87 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 PMCHL1Q16048 86 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 KRTAP25-1Q3LHN0 102 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 GDF5OSQ5U4N7 250 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 FER1L6-AS1Q8NA97 138 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 OR11H1Q8NG94 326 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 OR4X2Q8NGF9 303 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 OR11H2Q8NH07 326 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 PTH2Q96A98 100 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 ODF3Q96PU9 254 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 VPS25Q9BRG1 176 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 MAP1LC3CQ9BXW4 147 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 U3KQK5 164 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 BSNQ9UPA5 3926 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 LAMA5O15230 3695 aa2.74□□□□□ -1.97
HMGB3P14-201ENST00000494195 TRAV8-4A0A0B4J246 113 aa2.73□□□□□ -1.97
HMGB3P14-201ENST00000494195 IGLL5B9A064 214 aa2.73□□□□□ -1.97
HMGB3P14-201ENST00000494195 CRXO43186 299 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P14-201ENST00000494195 ARMS2P0C7Q2 107 aa2.73□□□□□ -1.97
HMGB3P14-201ENST00000494195 DDTP30046 118 aa2.73□□□□□ -1.97
HMGB3P14-201ENST00000494195 SNRPD3P62318 126 aaKnown RBP2.73□□□□□ -1.97
HMGB3P14-201ENST00000494195 KIAA2026Q5HYC2 2103 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms