RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 RITA1Q96K30 269 aa8.33□□□□□ -1.08
EWSR1-216ENST00000479135 IGLV3-21P80748 117 aaPredicted RBP8.33□□□□□ -1.08
EWSR1-216ENST00000479135 IGLV3-19P01714 112 aa8.33□□□□□ -1.08
EWSR1-216ENST00000479135 MSMPQ1L6U9 139 aa8.33□□□□□ -1.08
EWSR1-216ENST00000479135 CACNA1BQ00975 2339 aa8.33□□□□□ -1.08
EWSR1-216ENST00000479135 TANC2Q9HCD6 1990 aa8.33□□□□□ -1.08
EWSR1-216ENST00000479135 A0A1B0GXF2 115 aa8.33□□□□□ -1.08
EWSR1-216ENST00000479135 NRGNQ92686 78 aa8.33□□□□□ -1.08
EWSR1-216ENST00000479135 FRMD6-AS1P0C7T7 363 aa8.33□□□□□ -1.08
EWSR1-216ENST00000479135 DOCK4Q8N1I0 1966 aa8.33□□□□□ -1.08
EWSR1-216ENST00000479135 LINC00114Q6XXX2 140 aa8.32□□□□□ -1.08
EWSR1-216ENST00000479135 LINC00467Q9BRT7 94 aa8.32□□□□□ -1.08
EWSR1-216ENST00000479135 SCN10AQ9Y5Y9 1956 aa8.32□□□□□ -1.08
EWSR1-216ENST00000479135 PAPPA2Q9BXP8 1791 aa8.32□□□□□ -1.08
EWSR1-216ENST00000479135 C14orf177Q52M58 125 aa8.32□□□□□ -1.08
EWSR1-216ENST00000479135 TRBV6-1A0A0K0K1D8 114 aa8.32□□□□□ -1.08
EWSR1-216ENST00000479135 PTPRFP10586 1907 aa8.32□□□□□ -1.08
EWSR1-216ENST00000479135 PLA2G2DQ9UNK4 145 aa8.32□□□□□ -1.08
EWSR1-216ENST00000479135 ZNF833PQ6ZTB9 187 aa8.31□□□□□ -1.08
EWSR1-216ENST00000479135 XIRP1Q702N8 1843 aaKnown RBP8.31□□□□□ -1.08
EWSR1-216ENST00000479135 C17orf58Q2M2W7 97 aa8.31□□□□□ -1.08
EWSR1-216ENST00000479135 C1orf134Q5TEV5 83 aa8.31□□□□□ -1.08
EWSR1-216ENST00000479135 ATP5EP2Q5VTU8 51 aa8.31□□□□□ -1.08
EWSR1-216ENST00000479135 C17orf82Q86X59 251 aaPredicted RBP8.31□□□□□ -1.08
EWSR1-216ENST00000479135 ZNF843Q8N446 348 aa8.31□□□□□ -1.08
EWSR1-216ENST00000479135 SPTBN2O15020 2390 aa8.31□□□□□ -1.08
EWSR1-216ENST00000479135 FREM1Q5H8C1 2179 aa8.31□□□□□ -1.08
EWSR1-216ENST00000479135 CYSRT1A8MQ03 144 aa8.31□□□□□ -1.08
EWSR1-216ENST00000479135 DOCK3Q8IZD9 2030 aa8.31□□□□□ -1.08
EWSR1-216ENST00000479135 WNK2Q9Y3S1 2297 aa8.31□□□□□ -1.08
EWSR1-216ENST00000479135 LINC01554Q52M75 96 aa8.3□□□□□ -1.08
EWSR1-216ENST00000479135 TMEM190Q8WZ59 177 aa8.3□□□□□ -1.08
EWSR1-216ENST00000479135 HCG22E2RYF7 251 aa8.3□□□□□ -1.08
EWSR1-216ENST00000479135 C8orf87E5RJ46 101 aa8.3□□□□□ -1.08
EWSR1-216ENST00000479135 Q6ZS92 163 aa8.3□□□□□ -1.08
EWSR1-216ENST00000479135 SMAD5-AS1Q9Y6J3 95 aa8.3□□□□□ -1.08
EWSR1-216ENST00000479135 ZDBF2Q9HCK1 2354 aa8.3□□□□□ -1.08
EWSR1-216ENST00000479135 PYGO1Q9Y3Y4 419 aa8.29□□□□□ -1.08
EWSR1-216ENST00000479135 EPOPA6NHQ4 379 aa8.29□□□□□ -1.08
EWSR1-216ENST00000479135 LOC285556D6RIA3 1793 aa8.29□□□□□ -1.08
EWSR1-216ENST00000479135 FSHBP01225 129 aa8.29□□□□□ -1.08
EWSR1-216ENST00000479135 CSRP2Q16527 193 aa8.29□□□□□ -1.08
EWSR1-216ENST00000479135 XGP55808 180 aa8.29□□□□□ -1.08
EWSR1-216ENST00000479135 DEFB131BA0A096LNP1 70 aa8.28□□□□□ -1.08
EWSR1-216ENST00000479135 SMIM11BQ8TCY0 68 aa8.28□□□□□ -1.08
EWSR1-216ENST00000479135 TRIOBPQ9H2D6 2365 aa8.28□□□□□ -1.08
EWSR1-216ENST00000479135 NOTCH3Q9UM47 2321 aa8.28□□□□□ -1.08
EWSR1-216ENST00000479135 PROK1P58294 105 aa8.28□□□□□ -1.08
EWSR1-216ENST00000479135 HIGD1BQ9P298 99 aa8.28□□□□□ -1.08
EWSR1-216ENST00000479135 YPEL4Q96NS1 127 aa8.28□□□□□ -1.08
EWSR1-216ENST00000479135 CTSZQ9UBR2 303 aa8.28□□□□□ -1.08
EWSR1-216ENST00000479135 Q6ZTI0 123 aa8.27□□□□□ -1.09
EWSR1-216ENST00000479135 CDKN2A-AS1Q9UH64 79 aa8.27□□□□□ -1.09
EWSR1-216ENST00000479135 J3QLI3 93 aa8.27□□□□□ -1.09
EWSR1-216ENST00000479135 FHL2Q14192 279 aa8.27□□□□□ -1.09
EWSR1-216ENST00000479135 TSC2P49815 1807 aa8.26□□□□□ -1.09
EWSR1-216ENST00000479135 MAPKAPK5-AS1Q8N8E1 139 aa8.26□□□□□ -1.09
EWSR1-216ENST00000479135 C10orf99Q6UWK7 81 aa8.26□□□□□ -1.09
EWSR1-216ENST00000479135 TRAV7A0A075B6U4 112 aa8.25□□□□□ -1.09
EWSR1-216ENST00000479135 SPRY4Q9C004 299 aa8.25□□□□□ -1.09
EWSR1-216ENST00000479135 QRFPP83859 136 aa8.25□□□□□ -1.09
EWSR1-216ENST00000479135 HILS1P60008 231 aa8.25□□□□□ -1.09
EWSR1-216ENST00000479135 LST1O00453 97 aa8.25□□□□□ -1.09
EWSR1-216ENST00000479135 LINC00482Q8N8I6 264 aa8.25□□□□□ -1.09
EWSR1-216ENST00000479135 MED13Q9UHV7 2174 aa8.24□□□□□ -1.09
EWSR1-216ENST00000479135 Q8N6K4 173 aa8.24□□□□□ -1.09
EWSR1-216ENST00000479135 PRO0255Q9UI72 69 aa8.24□□□□□ -1.09
EWSR1-216ENST00000479135 K7ENP7 123 aa8.23□□□□□ -1.09
EWSR1-216ENST00000479135 PRR3P79522 188 aaKnown RBP8.23□□□□□ -1.09
EWSR1-216ENST00000479135 PLA2G5P39877 138 aa8.23□□□□□ -1.09
EWSR1-216ENST00000479135 RBBP6Q7Z6E9 1792 aaKnown RBP8.23□□□□□ -1.09
EWSR1-216ENST00000479135 C5orf67F2Z3F1 127 aa8.23□□□□□ -1.09
EWSR1-216ENST00000479135 CXCL6P80162 114 aa8.23□□□□□ -1.09
EWSR1-216ENST00000479135 SYCNQ0VAF6 134 aa8.23□□□□□ -1.09
EWSR1-216ENST00000479135 TET1Q8NFU7 2136 aa8.23□□□□□ -1.09
EWSR1-216ENST00000479135 ZNF236Q9UL36 1845 aa8.22□□□□□ -1.09
EWSR1-216ENST00000479135 THADAQ6YHU6 1953 aa8.22□□□□□ -1.09
EWSR1-216ENST00000479135 A0A0G2JMZ2 1700 aa8.22□□□□□ -1.09
EWSR1-216ENST00000479135 LRRC37A2A6NM11 1700 aa8.22□□□□□ -1.09
EWSR1-216ENST00000479135 hDV103S1A0JD37 113 aa8.22□□□□□ -1.09
EWSR1-216ENST00000479135 H7C423 109 aa8.22□□□□□ -1.09
EWSR1-216ENST00000479135 SHISA2Q6UWI4 295 aa8.21□□□□□ -1.09
EWSR1-216ENST00000479135 MRPS36P82909 103 aaKnown RBP8.21□□□□□ -1.09
EWSR1-216ENST00000479135 Q6ZSV7 163 aa8.21□□□□□ -1.09
EWSR1-216ENST00000479135 SORL1Q92673 2214 aa8.21□□□□□ -1.09
EWSR1-216ENST00000479135 LINC00337Q8N6G1 96 aa8.21□□□□□ -1.1
EWSR1-216ENST00000479135 PRRC2AP48634 2157 aaKnown RBP8.21□□□□□ -1.1
EWSR1-216ENST00000479135 C1orf64Q8NEQ6 169 aa8.21□□□□□ -1.1
EWSR1-216ENST00000479135 LINC01556Q5JQF7 62 aa8.21□□□□□ -1.1
EWSR1-216ENST00000479135 IMUPQ9GZP8 106 aa8.2□□□□□ -1.1
EWSR1-216ENST00000479135 ARID2Q68CP9 1835 aa8.2□□□□□ -1.1
EWSR1-216ENST00000479135 C9orf116Q5BN46 136 aaPredicted RBP8.2□□□□□ -1.1
EWSR1-216ENST00000479135 LINC00575Q6W349 94 aa8.2□□□□□ -1.1
EWSR1-216ENST00000479135 DHRS4-AS1Q9P1J3 65 aa8.2□□□□□ -1.1
EWSR1-216ENST00000479135 EDN2P20800 178 aa8.2□□□□□ -1.1
EWSR1-216ENST00000479135 Q8N3U1 123 aa8.2□□□□□ -1.1
EWSR1-216ENST00000479135 C20orf203Q8NBC4 194 aa8.2□□□□□ -1.1
EWSR1-216ENST00000479135 ZNF22P17026 224 aaPredicted RBP8.19□□□□□ -1.1
EWSR1-216ENST00000479135 SPRNQ5BIV9 151 aa8.19□□□□□ -1.1
EWSR1-216ENST00000479135 PRO0628Q9UI54 55 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms