RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 SPAG11BQ08648 103 aa-0.8□□□□□ -2.54
MDM2-216ENST00000471946 S100A7L2Q5SY68 101 aa-0.8□□□□□ -2.54
MDM2-216ENST00000471946 SCN3BQ9NY72 215 aa-0.8□□□□□ -2.54
MDM2-216ENST00000471946 PXDNQ92626 1479 aa-0.8□□□□□ -2.54
MDM2-216ENST00000471946 FHAD1B1AJZ9 1412 aa-0.81□□□□□ -2.54
MDM2-216ENST00000471946 NCR2O95944 276 aa-0.81□□□□□ -2.54
MDM2-216ENST00000471946 SMIM6P0DI80 62 aa-0.81□□□□□ -2.54
MDM2-216ENST00000471946 CKS1BP61024 79 aa-0.81□□□□□ -2.54
MDM2-216ENST00000471946 ZNF818PQ6ZRF7 136 aa-0.81□□□□□ -2.54
MDM2-216ENST00000471946 Q8IZM0 81 aa-0.81□□□□□ -2.54
MDM2-216ENST00000471946 NPVFQ9HCQ7 196 aa-0.81□□□□□ -2.54
MDM2-216ENST00000471946 CSPG4Q6UVK1 2322 aa-0.82□□□□□ -2.54
MDM2-216ENST00000471946 TENM2Q9NT68 2774 aa-0.82□□□□□ -2.54
MDM2-216ENST00000471946 CBLN1P23435 193 aa-0.82□□□□□ -2.54
MDM2-216ENST00000471946 SPTSSAQ969W0 71 aa-0.82□□□□□ -2.54
MDM2-216ENST00000471946 LINC00312Q9Y6C7 94 aa-0.82□□□□□ -2.54
MDM2-216ENST00000471946 BCL9LQ86UU0 1499 aa-0.82□□□□□ -2.54
MDM2-216ENST00000471946 MYO7BQ6PIF6 2116 aa-0.82□□□□□ -2.54
MDM2-216ENST00000471946 SRRM2Q9UQ35 2752 aaKnown RBP-0.82□□□□□ -2.54
MDM2-216ENST00000471946 ARAP2Q8WZ64 1704 aa-0.83□□□□□ -2.54
MDM2-216ENST00000471946 SPRR1AP35321 89 aa-0.83□□□□□ -2.54
MDM2-216ENST00000471946 CCL18P55774 89 aa-0.83□□□□□ -2.54
MDM2-216ENST00000471946 SPCS1Q9Y6A9 102 aa-0.83□□□□□ -2.54
MDM2-216ENST00000471946 MYOM3Q5VTT5 1437 aa-0.83□□□□□ -2.54
MDM2-216ENST00000471946 ERCC6L2Q5T890 1561 aa-0.83□□□□□ -2.54
MDM2-216ENST00000471946 MRC1P22897 1456 aa-0.84□□□□□ -2.54
MDM2-216ENST00000471946 J3QR89 54 aa-0.84□□□□□ -2.54
MDM2-216ENST00000471946 GSKIPQ9P0R6 139 aa-0.84□□□□□ -2.54
MDM2-216ENST00000471946 UNC13AQ9UPW8 1703 aa-0.84□□□□□ -2.54
MDM2-216ENST00000471946 KIF21AQ7Z4S6 1674 aa-0.84□□□□□ -2.54
MDM2-216ENST00000471946 NPFFO15130 113 aa-0.85□□□□□ -2.55
MDM2-216ENST00000471946 ARPC5O15511 151 aa-0.85□□□□□ -2.55
MDM2-216ENST00000471946 SNCGO76070 127 aa-0.85□□□□□ -2.55
MDM2-216ENST00000471946 MAP1BP46821 2468 aaKnown RBP-0.85□□□□□ -2.55
MDM2-216ENST00000471946 RRAS2P62070 204 aaPredicted RBP-0.85□□□□□ -2.55
MDM2-216ENST00000471946 C10orf71Q711Q0 1435 aa-0.85□□□□□ -2.55
MDM2-216ENST00000471946 PYDC1Q8WXC3 89 aa-0.85□□□□□ -2.55
MDM2-216ENST00000471946 PAPPAQ13219 1627 aa-0.86□□□□□ -2.55
MDM2-216ENST00000471946 COL6A3P12111 3177 aa-0.86□□□□□ -2.55
MDM2-216ENST00000471946 PI4KAP42356 2102 aa-0.86□□□□□ -2.55
MDM2-216ENST00000471946 K7ERU9 68 aa-0.86□□□□□ -2.55
MDM2-216ENST00000471946 M0R2Z0 102 aa-0.86□□□□□ -2.55
MDM2-216ENST00000471946 AKAP14Q86UN6 197 aa-0.86□□□□□ -2.55
MDM2-216ENST00000471946 KDM5AP29375 1690 aaKnown RBP-0.87□□□□□ -2.55
MDM2-216ENST00000471946 BCE1O60756 84 aa-0.87□□□□□ -2.55
MDM2-216ENST00000471946 NDUFB6O95139 128 aa-0.87□□□□□ -2.55
MDM2-216ENST00000471946 CCL8P80075 99 aa-0.87□□□□□ -2.55
MDM2-216ENST00000471946 GVINP1Q7Z2Y8 2422 aa-0.87□□□□□ -2.55
MDM2-216ENST00000471946 MYH7P12883 1935 aa-0.87□□□□□ -2.55
MDM2-216ENST00000471946 HAMPP81172 84 aa-0.88□□□□□ -2.55
MDM2-216ENST00000471946 SCIMPQ6UWF3 145 aa-0.88□□□□□ -2.55
MDM2-216ENST00000471946 SEC11CQ9BY50 192 aa-0.88□□□□□ -2.55
MDM2-216ENST00000471946 WNK1Q9H4A3 2382 aa-0.88□□□□□ -2.55
MDM2-216ENST00000471946 TCHHQ07283 1943 aa-0.88□□□□□ -2.55
MDM2-216ENST00000471946 ZNF518AQ6AHZ1 1483 aa-0.88□□□□□ -2.55
MDM2-216ENST00000471946 PIEZO2Q9H5I5 2752 aa-0.89□□□□□ -2.55
MDM2-216ENST00000471946 TSTD1Q8NFU3 115 aa-0.89□□□□□ -2.55
MDM2-216ENST00000471946 LZICQ8WZA0 190 aa-0.89□□□□□ -2.55
MDM2-216ENST00000471946 AGPAT4-IT1Q9H0P7 198 aa-0.89□□□□□ -2.55
MDM2-216ENST00000471946 IFT140Q96RY7 1462 aa-0.89□□□□□ -2.55
MDM2-216ENST00000471946 PPP1R17O96001 155 aa-0.9□□□□□ -2.55
MDM2-216ENST00000471946 TP53AIP1Q9HCN2 124 aa-0.9□□□□□ -2.55
MDM2-216ENST00000471946 PHLPP1O60346 1717 aa-0.9□□□□□ -2.55
MDM2-216ENST00000471946 MAP1AP78559 2803 aaPredicted RBP-0.91□□□□□ -2.55
MDM2-216ENST00000471946 PSME4Q14997 1843 aa-0.91□□□□□ -2.55
MDM2-216ENST00000471946 FXYD6-FXYD2A0A087WZ82 144 aa-0.91□□□□□ -2.56
MDM2-216ENST00000471946 ALX1Q15699 326 aa-0.91□□□□□ -2.56
MDM2-216ENST00000471946 KRTAP19-7Q3SYF9 63 aa-0.91□□□□□ -2.56
MDM2-216ENST00000471946 TPT1P8Q9HAU6 139 aa-0.91□□□□□ -2.56
MDM2-216ENST00000471946 DR1Q01658 176 aa-0.92□□□□□ -2.56
MDM2-216ENST00000471946 R4GMQ9 66 aa-0.92□□□□□ -2.56
MDM2-216ENST00000471946 BTAF1O14981 1849 aa-0.93□□□□□ -2.56
MDM2-216ENST00000471946 I3L2K1 104 aa-0.93□□□□□ -2.56
MDM2-216ENST00000471946 M0R135 149 aa-0.93□□□□□ -2.56
MDM2-216ENST00000471946 GUCA1AP43080 201 aaPredicted RBP-0.93□□□□□ -2.56
MDM2-216ENST00000471946 KCNRGQ8N5I3 272 aa-0.93□□□□□ -2.56
MDM2-216ENST00000471946 SMIM4Q8WVI0 70 aa-0.93□□□□□ -2.56
MDM2-216ENST00000471946 COPZ2Q9P299 210 aa-0.93□□□□□ -2.56
MDM2-216ENST00000471946 SPTA1P02549 2419 aa-0.94□□□□□ -2.56
MDM2-216ENST00000471946 CTXND1A0A1B0GTU2 59 aa-0.94□□□□□ -2.56
MDM2-216ENST00000471946 SIX6O95475 246 aa-0.94□□□□□ -2.56
MDM2-216ENST00000471946 DCDP81605 110 aaKnown RBP-0.94□□□□□ -2.56
MDM2-216ENST00000471946 ANKRD17O75179 2603 aaKnown RBP-0.94□□□□□ -2.56
MDM2-216ENST00000471946 FOCADQ5VW36 1801 aa-0.94□□□□□ -2.56
MDM2-216ENST00000471946 PDZD2O15018 2839 aa-0.94□□□□□ -2.56
MDM2-216ENST00000471946 ATRQ13535 2644 aa-0.95□□□□□ -2.56
MDM2-216ENST00000471946 APC2O95996 2303 aa-0.95□□□□□ -2.56
MDM2-216ENST00000471946 TRAV13-2A0A0B4J235 113 aa-0.95□□□□□ -2.56
MDM2-216ENST00000471946 SPAARA0A1B0GVQ0 90 aa-0.95□□□□□ -2.56
MDM2-216ENST00000471946 HCG22E2RYF7 251 aa-0.95□□□□□ -2.56
MDM2-216ENST00000471946 K7EQZ3 153 aa-0.95□□□□□ -2.56
MDM2-216ENST00000471946 S100A3P33764 101 aa-0.95□□□□□ -2.56
MDM2-216ENST00000471946 COPZ1P61923 177 aa-0.95□□□□□ -2.56
MDM2-216ENST00000471946 RPS25P62851 125 aaKnown RBP-0.95□□□□□ -2.56
MDM2-216ENST00000471946 RIMS1Q86UR5 1692 aaKnown RBP-0.95□□□□□ -2.56
MDM2-216ENST00000471946 FLNBO75369 2602 aaKnown RBP-0.96□□□□□ -2.56
MDM2-216ENST00000471946 GRIN2AQ12879 1464 aa-0.96□□□□□ -2.56
MDM2-216ENST00000471946 SMIM21Q3B7S5 101 aa-0.96□□□□□ -2.56
MDM2-216ENST00000471946 ANP32BQ92688 251 aaKnown RBP-0.96□□□□□ -2.56
MDM2-216ENST00000471946 SDF2Q99470 211 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms