RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 NDPQ00604 133 aa10.89□□□□□ -0.67
SYNGAP1-203ENST00000428982 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.89□□□□□ -0.67
SYNGAP1-203ENST00000428982 Q96MF0 132 aa10.89□□□□□ -0.67
SYNGAP1-203ENST00000428982 SOCS3O14543 225 aa10.88□□□□□ -0.67
SYNGAP1-203ENST00000428982 LY6G5BQ8NDX9 201 aa10.88□□□□□ -0.67
SYNGAP1-203ENST00000428982 IGHV4-30-2A0A087WSY4 118 aa10.88□□□□□ -0.67
SYNGAP1-203ENST00000428982 DEFB113Q30KQ7 82 aa10.88□□□□□ -0.67
SYNGAP1-203ENST00000428982 TMEM223A0PJW6 202 aa10.88□□□□□ -0.67
SYNGAP1-203ENST00000428982 FAM223BA6NKX1 122 aa10.88□□□□□ -0.67
SYNGAP1-203ENST00000428982 FAM223AQ8IWN6 122 aa10.88□□□□□ -0.67
SYNGAP1-203ENST00000428982 NRACQ8N912 160 aa10.88□□□□□ -0.67
SYNGAP1-203ENST00000428982 ZNF625Q96I27 306 aaPredicted RBP10.88□□□□□ -0.67
SYNGAP1-203ENST00000428982 IGHV3-66A0A0C4DH42 116 aa10.88□□□□□ -0.67
SYNGAP1-203ENST00000428982 LINC01546A6NGU7 62 aa10.88□□□□□ -0.67
SYNGAP1-203ENST00000428982 IGHV1-69P01742 117 aa10.88□□□□□ -0.67
SYNGAP1-203ENST00000428982 MAPK1IP1LQ8NDC0 245 aa10.88□□□□□ -0.67
SYNGAP1-203ENST00000428982 MOB4Q9Y3A3 225 aa10.88□□□□□ -0.67
SYNGAP1-203ENST00000428982 FANCD2OSQ96PS1 177 aa10.87□□□□□ -0.67
SYNGAP1-203ENST00000428982 PTPN13Q12923 2485 aa10.87□□□□□ -0.67
SYNGAP1-203ENST00000428982 IGLV2-18A0A075B6J9 118 aa10.87□□□□□ -0.67
SYNGAP1-203ENST00000428982 COX8CQ7Z4L0 72 aa10.87□□□□□ -0.67
SYNGAP1-203ENST00000428982 IGHV3OR16-13A0A075B7E8 117 aa10.86□□□□□ -0.67
SYNGAP1-203ENST00000428982 IGHV3-74A0A0B4J1X5 117 aa10.86□□□□□ -0.67
SYNGAP1-203ENST00000428982 CTSGP08311 255 aa10.86□□□□□ -0.67
SYNGAP1-203ENST00000428982 LAMA5O15230 3695 aa10.86□□□□□ -0.67
SYNGAP1-203ENST00000428982 H3BUX3 64 aa10.86□□□□□ -0.67
SYNGAP1-203ENST00000428982 BBC3Q96PG8 261 aaPredicted RBP10.86□□□□□ -0.67
SYNGAP1-203ENST00000428982 NOTCH2Q04721 2471 aa10.86□□□□□ -0.67
SYNGAP1-203ENST00000428982 TRAV23DV6A0A075B6W5 121 aa10.86□□□□□ -0.67
SYNGAP1-203ENST00000428982 DCHS1Q96JQ0 3298 aa10.86□□□□□ -0.67
SYNGAP1-203ENST00000428982 ZNF462Q96JM2 2506 aa10.85□□□□□ -0.67
SYNGAP1-203ENST00000428982 TIRAPP58753 221 aa10.85□□□□□ -0.67
SYNGAP1-203ENST00000428982 RUSC1-AS1Q66K80 236 aa10.85□□□□□ -0.67
SYNGAP1-203ENST00000428982 DGAT2L7PQ6IED9 249 aa10.85□□□□□ -0.67
SYNGAP1-203ENST00000428982 DAND5Q8N907 189 aa10.85□□□□□ -0.67
SYNGAP1-203ENST00000428982 A0A0J9YXY3 114 aa10.85□□□□□ -0.67
SYNGAP1-203ENST00000428982 IGHV3-49A0A0A0MS15 119 aa10.85□□□□□ -0.67
SYNGAP1-203ENST00000428982 RPL39P62891 51 aaKnown RBP10.85□□□□□ -0.67
SYNGAP1-203ENST00000428982 TMEM86BQ8N661 226 aa10.85□□□□□ -0.67
SYNGAP1-203ENST00000428982 A0A087WVE0 104 aa10.85□□□□□ -0.67
SYNGAP1-203ENST00000428982 CD28P10747 220 aa10.85□□□□□ -0.67
SYNGAP1-203ENST00000428982 PRIMA1Q86XR5 153 aa10.84□□□□□ -0.67
SYNGAP1-203ENST00000428982 NAV2Q8IVL1 2488 aa10.84□□□□□ -0.67
SYNGAP1-203ENST00000428982 SDHAF1A6NFY7 115 aa10.84□□□□□ -0.67
SYNGAP1-203ENST00000428982 MPLKIPQ8TAP9 179 aa10.84□□□□□ -0.67
SYNGAP1-203ENST00000428982 TSPEAR-AS2P59090 65 aa10.84□□□□□ -0.67
SYNGAP1-203ENST00000428982 MRGPRG-AS1Q2M3A8 158 aa10.83□□□□□ -0.68
SYNGAP1-203ENST00000428982 U3KQE9 123 aa10.83□□□□□ -0.68
SYNGAP1-203ENST00000428982 DOPEY2Q9Y3R5 2298 aa10.83□□□□□ -0.68
SYNGAP1-203ENST00000428982 Q5XG85 94 aa10.83□□□□□ -0.68
SYNGAP1-203ENST00000428982 A0A1W2PRX2 142 aa10.83□□□□□ -0.68
SYNGAP1-203ENST00000428982 ODF3BA8MYP8 253 aa10.83□□□□□ -0.68
SYNGAP1-203ENST00000428982 ZFP36P26651 326 aaKnown RBP10.83□□□□□ -0.68
SYNGAP1-203ENST00000428982 OVOL2Q9BRP0 275 aa10.83□□□□□ -0.68
SYNGAP1-203ENST00000428982 BUB3O43684 328 aa10.83□□□□□ -0.68
SYNGAP1-203ENST00000428982 TIMM17BO60830 172 aa10.83□□□□□ -0.68
SYNGAP1-203ENST00000428982 USMG5Q96IX5 58 aa10.83□□□□□ -0.68
SYNGAP1-203ENST00000428982 CNFNQ9BYD5 112 aa10.83□□□□□ -0.68
SYNGAP1-203ENST00000428982 ATP6V0E1O15342 81 aa10.82□□□□□ -0.68
SYNGAP1-203ENST00000428982 IGHV7-81A0A0B4J1V7 117 aa10.82□□□□□ -0.68
SYNGAP1-203ENST00000428982 RNASE1P07998 156 aaKnown RBP10.82□□□□□ -0.68
SYNGAP1-203ENST00000428982 LOC400499M0QZD8 3231 aa10.82□□□□□ -0.68
SYNGAP1-203ENST00000428982 COX7A2LO14548 114 aa10.82□□□□□ -0.68
SYNGAP1-203ENST00000428982 LMO4P61968 165 aa10.82□□□□□ -0.68
SYNGAP1-203ENST00000428982 C5orf38Q86SI9 138 aa10.82□□□□□ -0.68
SYNGAP1-203ENST00000428982 TIMM17AQ99595 171 aa10.82□□□□□ -0.68
SYNGAP1-203ENST00000428982 CREBBPQ92793 2442 aa10.82□□□□□ -0.68
SYNGAP1-203ENST00000428982 IGKV3D-20A0A0C4DH25 116 aa10.81□□□□□ -0.68
SYNGAP1-203ENST00000428982 RNASE4P34096 147 aaKnown RBP10.81□□□□□ -0.68
SYNGAP1-203ENST00000428982 A0A0J9YXV3 536 aa10.81□□□□□ -0.68
SYNGAP1-203ENST00000428982 PSMB8P28062 276 aa10.81□□□□□ -0.68
SYNGAP1-203ENST00000428982 MRPL55Q7Z7F7 128 aaKnown RBP10.81□□□□□ -0.68
SYNGAP1-203ENST00000428982 DEFB121Q5J5C9 76 aa10.81□□□□□ -0.68
SYNGAP1-203ENST00000428982 C9orf47Q6ZRZ4 202 aa10.81□□□□□ -0.68
SYNGAP1-203ENST00000428982 VSIG2Q96IQ7 327 aa10.81□□□□□ -0.68
SYNGAP1-203ENST00000428982 C14orf132Q9NPU4 83 aa10.8□□□□□ -0.68
SYNGAP1-203ENST00000428982 MED14OSP0DP75 135 aa10.8□□□□□ -0.68
SYNGAP1-203ENST00000428982 SMCR5Q8TEV8 140 aa10.8□□□□□ -0.68
SYNGAP1-203ENST00000428982 OVOL3O00110 214 aa10.79□□□□□ -0.68
SYNGAP1-203ENST00000428982 MIAQ16674 131 aa10.79□□□□□ -0.68
SYNGAP1-203ENST00000428982 Q6JHZ5 121 aa10.79□□□□□ -0.68
SYNGAP1-203ENST00000428982 AKAP13Q12802 2813 aa10.79□□□□□ -0.68
SYNGAP1-203ENST00000428982 CSPG4Q6UVK1 2322 aa10.79□□□□□ -0.68
SYNGAP1-203ENST00000428982 A0A1W2PPR1 153 aa10.79□□□□□ -0.68
SYNGAP1-203ENST00000428982 Q8N9W7 124 aa10.79□□□□□ -0.68
SYNGAP1-203ENST00000428982 C2orf48Q96LS8 159 aa10.79□□□□□ -0.68
SYNGAP1-203ENST00000428982 UBL5Q9BZL1 73 aa10.79□□□□□ -0.68
SYNGAP1-203ENST00000428982 LRRK2Q5S007 2527 aa10.79□□□□□ -0.68
SYNGAP1-203ENST00000428982 FRYQ5TBA9 3013 aa10.78□□□□□ -0.68
SYNGAP1-203ENST00000428982 NDUFA4O00483 81 aa10.78□□□□□ -0.68
SYNGAP1-203ENST00000428982 HOXD3P31249 432 aaPredicted RBP10.78□□□□□ -0.68
SYNGAP1-203ENST00000428982 PLA2G2AP14555 144 aa10.78□□□□□ -0.68
SYNGAP1-203ENST00000428982 CRPP02741 224 aa10.78□□□□□ -0.68
SYNGAP1-203ENST00000428982 IGHV3-30-3P0DP02 117 aa10.78□□□□□ -0.68
SYNGAP1-203ENST00000428982 IGKV3-7A0A075B6H7 116 aa10.77□□□□□ -0.68
SYNGAP1-203ENST00000428982 CCDC168Q8NDH2 2452 aa10.77□□□□□ -0.68
SYNGAP1-203ENST00000428982 SNRPD3P62318 126 aaKnown RBP10.77□□□□□ -0.69
SYNGAP1-203ENST00000428982 MRPS36P82909 103 aaKnown RBP10.77□□□□□ -0.69
SYNGAP1-203ENST00000428982 PMAIP1Q13794 54 aa10.77□□□□□ -0.69
SYNGAP1-203ENST00000428982 Q9HAA7 133 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms