RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 TRACP01848 142 aa7.34□□□□□ -1.23
SNX13-203ENST00000428135 PROK1P58294 105 aa7.34□□□□□ -1.23
SNX13-203ENST00000428135 C10orf91Q5T1B1 145 aa7.34□□□□□ -1.23
SNX13-203ENST00000428135 Q6ZUT4 128 aa7.34□□□□□ -1.23
SNX13-203ENST00000428135 C20orf144Q9BQM9 153 aa7.34□□□□□ -1.23
SNX13-203ENST00000428135 ANKRD39Q53RE8 183 aa7.34□□□□□ -1.24
SNX13-203ENST00000428135 TDRG1Q3Y452 100 aa7.33□□□□□ -1.24
SNX13-203ENST00000428135 LYPD6BQ8NI32 183 aa7.33□□□□□ -1.24
SNX13-203ENST00000428135 NTN5Q8WTR8 489 aaPredicted RBP7.33□□□□□ -1.24
SNX13-203ENST00000428135 LINC00322Q6ZN03 302 aaPredicted RBP7.33□□□□□ -1.24
SNX13-203ENST00000428135 SH2D6Q7Z4S9 175 aa7.33□□□□□ -1.24
SNX13-203ENST00000428135 FLNBO75369 2602 aaKnown RBP7.33□□□□□ -1.24
SNX13-203ENST00000428135 INAFM2P0DMQ5 153 aa7.33□□□□□ -1.24
SNX13-203ENST00000428135 CRYGDP07320 174 aa7.33□□□□□ -1.24
SNX13-203ENST00000428135 CFC1BP0CG36 223 aa7.33□□□□□ -1.24
SNX13-203ENST00000428135 CFC1P0CG37 223 aa7.33□□□□□ -1.24
SNX13-203ENST00000428135 TRBV20-1A0A075B6N2 111 aa7.32□□□□□ -1.24
SNX13-203ENST00000428135 A0A1W2PPM0 123 aa7.32□□□□□ -1.24
SNX13-203ENST00000428135 LINC01006Q8NI28 216 aa7.32□□□□□ -1.24
SNX13-203ENST00000428135 TMEM89A2RUT3 159 aa7.32□□□□□ -1.24
SNX13-203ENST00000428135 ORMDL1Q9P0S3 153 aa7.32□□□□□ -1.24
SNX13-203ENST00000428135 A4D1N5 150 aa7.32□□□□□ -1.24
SNX13-203ENST00000428135 HILS1P60008 231 aa7.32□□□□□ -1.24
SNX13-203ENST00000428135 HERV-K104P63124 156 aa7.32□□□□□ -1.24
SNX13-203ENST00000428135 SHISA2Q6UWI4 295 aa7.32□□□□□ -1.24
SNX13-203ENST00000428135 USP9XQ93008 2570 aaPredicted RBP7.32□□□□□ -1.24
SNX13-203ENST00000428135 NPSP0C0P6 89 aa7.31□□□□□ -1.24
SNX13-203ENST00000428135 MIR7-3HGQ8N6C7 128 aa7.31□□□□□ -1.24
SNX13-203ENST00000428135 AVPP01185 164 aa7.31□□□□□ -1.24
SNX13-203ENST00000428135 CRYBA4P53673 196 aa7.31□□□□□ -1.24
SNX13-203ENST00000428135 A0A1W2PPR1 153 aa7.31□□□□□ -1.24
SNX13-203ENST00000428135 C4orf48Q5BLP8 95 aa7.31□□□□□ -1.24
SNX13-203ENST00000428135 ZNF702PQ9H963 129 aa7.31□□□□□ -1.24
SNX13-203ENST00000428135 TRBV6-1A0A0K0K1D8 114 aa7.31□□□□□ -1.24
SNX13-203ENST00000428135 LY6G6CO95867 125 aa7.31□□□□□ -1.24
SNX13-203ENST00000428135 CRIP3Q6Q6R5 217 aa7.31□□□□□ -1.24
SNX13-203ENST00000428135 FN1P02751 2386 aaKnown RBP7.3□□□□□ -1.24
SNX13-203ENST00000428135 C11orf86A6NJI1 115 aa7.3□□□□□ -1.24
SNX13-203ENST00000428135 LINC00526Q96FQ7 95 aa7.3□□□□□ -1.24
SNX13-203ENST00000428135 PRUNE2Q8WUY3 3088 aa7.3□□□□□ -1.24
SNX13-203ENST00000428135 EDN2P20800 178 aa7.3□□□□□ -1.24
SNX13-203ENST00000428135 HIGD2AQ9BW72 106 aa7.3□□□□□ -1.24
SNX13-203ENST00000428135 PKD1L2Q7Z442 2459 aa7.3□□□□□ -1.24
SNX13-203ENST00000428135 REG3AQ06141 175 aa7.3□□□□□ -1.24
SNX13-203ENST00000428135 K7EQG2 157 aa7.29□□□□□ -1.24
SNX13-203ENST00000428135 USP9YO00507 2555 aaPredicted RBP7.29□□□□□ -1.24
SNX13-203ENST00000428135 CLEC2BQ92478 149 aa7.29□□□□□ -1.24
SNX13-203ENST00000428135 TOMM6Q96B49 74 aa7.29□□□□□ -1.24
SNX13-203ENST00000428135 K7EP34 96 aa7.29□□□□□ -1.24
SNX13-203ENST00000428135 PPDPFLQ8WWR9 84 aa7.29□□□□□ -1.24
SNX13-203ENST00000428135 COL5A1P20908 1838 aaPredicted RBP7.29□□□□□ -1.24
SNX13-203ENST00000428135 Q8N976 141 aa7.29□□□□□ -1.24
SNX13-203ENST00000428135 LINC00467Q9BRT7 94 aa7.29□□□□□ -1.24
SNX13-203ENST00000428135 HTTP42858 3142 aa7.28□□□□□ -1.24
SNX13-203ENST00000428135 SPATA25Q9BR10 227 aa7.28□□□□□ -1.24
SNX13-203ENST00000428135 LOC100131303A0A0U1RQF7 123 aa7.28□□□□□ -1.24
SNX13-203ENST00000428135 LY6LH3BQJ8 138 aa7.28□□□□□ -1.24
SNX13-203ENST00000428135 K7EP13 123 aa7.28□□□□□ -1.24
SNX13-203ENST00000428135 CTRLP40313 264 aa7.28□□□□□ -1.24
SNX13-203ENST00000428135 LRP4O75096 1905 aa7.28□□□□□ -1.24
SNX13-203ENST00000428135 IGKV3D-7A0A0C4DH55 119 aa7.28□□□□□ -1.24
SNX13-203ENST00000428135 ZNF295-AS1Q8N0V1 137 aa7.28□□□□□ -1.24
SNX13-203ENST00000428135 EML5Q05BV3 1969 aa7.27□□□□□ -1.24
SNX13-203ENST00000428135 A0A087WZ39 114 aa7.27□□□□□ -1.24
SNX13-203ENST00000428135 RETNQ9HD89 108 aa7.27□□□□□ -1.25
SNX13-203ENST00000428135 C10orf142B7Z368 130 aa7.27□□□□□ -1.25
SNX13-203ENST00000428135 FUSP35637 526 aaKnown RBP eCLIP7.27□□□□□ -1.25
SNX13-203ENST00000428135 CHD7Q9P2D1 2997 aa7.27□□□□□ -1.25
SNX13-203ENST00000428135 FAM19A5Q7Z5A7 132 aaPredicted RBP7.26□□□□□ -1.25
SNX13-203ENST00000428135 HCFC1P51610 2035 aa7.26□□□□□ -1.25
SNX13-203ENST00000428135 PRSS47A8MTI9 375 aa7.26□□□□□ -1.25
SNX13-203ENST00000428135 NANOS2P60321 138 aaKnown RBP7.26□□□□□ -1.25
SNX13-203ENST00000428135 NFE4Q86UQ8 179 aa7.26□□□□□ -1.25
SNX13-203ENST00000428135 CHCHD10Q8WYQ3 142 aaPredicted RBP7.26□□□□□ -1.25
SNX13-203ENST00000428135 FXYD2P54710 66 aa7.26□□□□□ -1.25
SNX13-203ENST00000428135 CRYGBP07316 175 aa7.26□□□□□ -1.25
SNX13-203ENST00000428135 PSMB8P28062 276 aa7.26□□□□□ -1.25
SNX13-203ENST00000428135 FOXI1Q12951 378 aa7.26□□□□□ -1.25
SNX13-203ENST00000428135 XAGE1AQ9HD64 81 aa7.26□□□□□ -1.25
SNX13-203ENST00000428135 F8W1H4 67 aa7.26□□□□□ -1.25
SNX13-203ENST00000428135 LGALS9O00182 355 aa7.26□□□□□ -1.25
SNX13-203ENST00000428135 C20orf203Q8NBC4 194 aa7.26□□□□□ -1.25
SNX13-203ENST00000428135 ACANP16112 2415 aa7.25□□□□□ -1.25
SNX13-203ENST00000428135 ANKRD29Q8N6D5 301 aa7.25□□□□□ -1.25
SNX13-203ENST00000428135 ZFAND2AQ8N6M9 145 aa7.25□□□□□ -1.25
SNX13-203ENST00000428135 RAI1Q7Z5J4 1906 aaPredicted RBP7.25□□□□□ -1.25
SNX13-203ENST00000428135 TRBV10-1A0A0K0K1A3 114 aa7.25□□□□□ -1.25
SNX13-203ENST00000428135 P0C879 139 aa7.25□□□□□ -1.25
SNX13-203ENST00000428135 IL17DQ8TAD2 202 aa7.25□□□□□ -1.25
SNX13-203ENST00000428135 ZFAND3Q9H8U3 227 aa7.25□□□□□ -1.25
SNX13-203ENST00000428135 C19orf71A6NCJ1 209 aa7.25□□□□□ -1.25
SNX13-203ENST00000428135 LINC00574Q9H8X3 128 aa7.25□□□□□ -1.25
SNX13-203ENST00000428135 MTORP42345 2549 aa7.24□□□□□ -1.25
SNX13-203ENST00000428135 A0A0J9YWU9 116 aa7.24□□□□□ -1.25
SNX13-203ENST00000428135 DIRC1Q969H9 104 aa7.24□□□□□ -1.25
SNX13-203ENST00000428135 IGKV2D-26A0A0A0MRZ7 120 aa7.24□□□□□ -1.25
SNX13-203ENST00000428135 NEXN-AS1Q8NBZ9 246 aa7.24□□□□□ -1.25
SNX13-203ENST00000428135 DCANP1Q8TF63 244 aa7.24□□□□□ -1.25
SNX13-203ENST00000428135 PRRC2CQ9Y520 2896 aaKnown RBP7.24□□□□□ -1.25
SNX13-203ENST00000428135 H0Y9J4 135 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms