RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 IGHV3-30P01768 117 aa14.78□□□□□ -0.04
HCG18-235ENST00000426882 IGHV3-33P01772 117 aa14.78□□□□□ -0.04
HCG18-235ENST00000426882 IGHV3-30-5P0DP03 117 aa14.78□□□□□ -0.04
HCG18-235ENST00000426882 CAMK2N2Q96S95 79 aa14.78□□□□□ -0.04
HCG18-235ENST00000426882 ACYP1P07311 99 aa14.78□□□□□ -0.04
HCG18-235ENST00000426882 Q6ZTI0 123 aa14.78□□□□□ -0.04
HCG18-235ENST00000426882 CLEC2BQ92478 149 aa14.77□□□□□ -0.04
HCG18-235ENST00000426882 PTH2Q96A98 100 aa14.77□□□□□ -0.04
HCG18-235ENST00000426882 MRAPQ8TCY5 172 aa14.77□□□□□ -0.05
HCG18-235ENST00000426882 MIR7-3HGQ8N6C7 128 aa14.77□□□□□ -0.05
HCG18-235ENST00000426882 CDSNQ15517 529 aa14.76□□□□□ -0.05
HCG18-235ENST00000426882 DEFB114Q30KQ6 69 aa14.76□□□□□ -0.05
HCG18-235ENST00000426882 C11orf21Q9P2W6 132 aa14.75□□□□□ -0.05
HCG18-235ENST00000426882 TLN2Q9Y4G6 2542 aa14.75□□□□□ -0.05
HCG18-235ENST00000426882 TRBV10-2A0A0K0K1G8 114 aa14.75□□□□□ -0.05
HCG18-235ENST00000426882 NFE4Q86UQ8 179 aa14.75□□□□□ -0.05
HCG18-235ENST00000426882 A0A0J9YXY3 114 aa14.75□□□□□ -0.05
HCG18-235ENST00000426882 TM2D2Q9BX73 214 aa14.75□□□□□ -0.05
HCG18-235ENST00000426882 ANKRD11Q6UB99 2663 aaPredicted RBP14.74□□□□□ -0.05
HCG18-235ENST00000426882 IGHV4-4A0A075B6R2 117 aa14.74□□□□□ -0.05
HCG18-235ENST00000426882 G3V4G9 280 aa14.74□□□□□ -0.05
HCG18-235ENST00000426882 RBMY1FQ15415 496 aaKnown RBP14.74□□□□□ -0.05
HCG18-235ENST00000426882 MAPKAPK5-AS1Q8N8E1 139 aa14.74□□□□□ -0.05
HCG18-235ENST00000426882 TNRC6BQ9UPQ9 1833 aaKnown RBP14.74□□□□□ -0.05
HCG18-235ENST00000426882 PRO0255Q9UI72 69 aa14.74□□□□□ -0.05
HCG18-235ENST00000426882 USP9XQ93008 2570 aaPredicted RBP14.73□□□□□ -0.05
HCG18-235ENST00000426882 LRRC75A-AS1Q8N1F1 130 aa14.73□□□□□ -0.05
HCG18-235ENST00000426882 M0QY20 66 aa14.73□□□□□ -0.05
HCG18-235ENST00000426882 H3BT86 120 aa14.72□□□□□ -0.05
HCG18-235ENST00000426882 LINC00310P59036 64 aa14.72□□□□□ -0.05
HCG18-235ENST00000426882 MIAQ16674 131 aa14.72□□□□□ -0.05
HCG18-235ENST00000426882 PRR9Q5T870 116 aa14.72□□□□□ -0.05
HCG18-235ENST00000426882 WFDC11Q8NEX6 87 aa14.72□□□□□ -0.05
HCG18-235ENST00000426882 LINC00467Q9BRT7 94 aa14.72□□□□□ -0.05
HCG18-235ENST00000426882 LECT2O14960 151 aa14.72□□□□□ -0.05
HCG18-235ENST00000426882 IGLV4-3A0A075B6K6 122 aa14.71□□□□□ -0.05
HCG18-235ENST00000426882 TCL1BO95988 128 aa14.71□□□□□ -0.05
HCG18-235ENST00000426882 ZNF22P17026 224 aaPredicted RBP14.71□□□□□ -0.05
HCG18-235ENST00000426882 ZMAT4Q9H898 229 aa14.71□□□□□ -0.05
HCG18-235ENST00000426882 CDKN2A-AS1Q9UH64 79 aa14.71□□□□□ -0.05
HCG18-235ENST00000426882 KLK12Q9UKR0 248 aa14.7□□□□□ -0.06
HCG18-235ENST00000426882 PSMB8P28062 276 aa14.7□□□□□ -0.06
HCG18-235ENST00000426882 NRACQ8N912 160 aa14.7□□□□□ -0.06
HCG18-235ENST00000426882 DEFB105AQ8NG35 78 aa14.7□□□□□ -0.06
HCG18-235ENST00000426882 B5MCH6 92 aa14.7□□□□□ -0.06
HCG18-235ENST00000426882 RNASE3P12724 160 aaKnown RBP14.7□□□□□ -0.06
HCG18-235ENST00000426882 SPAG11BQ08648 103 aa14.7□□□□□ -0.06
HCG18-235ENST00000426882 GAS8-AS1O95177 125 aa14.69□□□□□ -0.06
HCG18-235ENST00000426882 Q6ZS46 218 aa14.68□□□□□ -0.06
HCG18-235ENST00000426882 EML5Q05BV3 1969 aa14.68□□□□□ -0.06
HCG18-235ENST00000426882 INSL3P51460 131 aa14.68□□□□□ -0.06
HCG18-235ENST00000426882 CXCL5P42830 114 aa14.68□□□□□ -0.06
HCG18-235ENST00000426882 RPL18AQ02543 176 aaKnown RBP14.68□□□□□ -0.06
HCG18-235ENST00000426882 Q6ZSV7 163 aa14.67□□□□□ -0.06
HCG18-235ENST00000426882 NDUFA1O15239 70 aa14.67□□□□□ -0.06
HCG18-235ENST00000426882 USP9YO00507 2555 aaPredicted RBP14.67□□□□□ -0.06
HCG18-235ENST00000426882 CPAMD8Q8IZJ3 1885 aa14.67□□□□□ -0.06
HCG18-235ENST00000426882 A0A0B4J2C4 111 aa14.67□□□□□ -0.06
HCG18-235ENST00000426882 TRBV27A0A0K0K1C4 114 aa14.67□□□□□ -0.06
HCG18-235ENST00000426882 TRACP01848 142 aa14.67□□□□□ -0.06
HCG18-235ENST00000426882 PROK1P58294 105 aa14.66□□□□□ -0.06
HCG18-235ENST00000426882 TMEM223A0PJW6 202 aa14.66□□□□□ -0.06
HCG18-235ENST00000426882 NCR3O14931 201 aa14.66□□□□□ -0.06
HCG18-235ENST00000426882 CFAP126Q5VTH2 177 aa14.66□□□□□ -0.06
HCG18-235ENST00000426882 C2orf91Q6ZV80 131 aa14.65□□□□□ -0.06
HCG18-235ENST00000426882 UBE2BP63146 152 aa14.65□□□□□ -0.06
HCG18-235ENST00000426882 SETD2Q9BYW2 2564 aaPredicted RBP14.65□□□□□ -0.06
HCG18-235ENST00000426882 IGKV3D-7A0A0C4DH55 119 aa14.65□□□□□ -0.06
HCG18-235ENST00000426882 ETDCA0A1B0GVM5 59 aa14.64□□□□□ -0.07
HCG18-235ENST00000426882 MRPS12O15235 138 aaKnown RBP14.64□□□□□ -0.07
HCG18-235ENST00000426882 CCL18P55774 89 aa14.64□□□□□ -0.07
HCG18-235ENST00000426882 TRBV6-5A0A0K0K1A5 114 aa14.64□□□□□ -0.07
HCG18-235ENST00000426882 KLLNB2CW77 178 aa14.64□□□□□ -0.07
HCG18-235ENST00000426882 COL5A1P20908 1838 aaPredicted RBP14.63□□□□□ -0.07
HCG18-235ENST00000426882 hADV29S1A0JD25 119 aa14.63□□□□□ -0.07
HCG18-235ENST00000426882 PRRC2AP48634 2157 aaKnown RBP14.63□□□□□ -0.07
HCG18-235ENST00000426882 IGLV1-40P01703 118 aa14.63□□□□□ -0.07
HCG18-235ENST00000426882 HIST2H2BDQ6DRA6 164 aa14.63□□□□□ -0.07
HCG18-235ENST00000426882 PSMG3-AS1Q96PY0 264 aa14.63□□□□□ -0.07
HCG18-235ENST00000426882 CNFNQ9BYD5 112 aa14.63□□□□□ -0.07
HCG18-235ENST00000426882 ZNF702PQ9H963 129 aa14.63□□□□□ -0.07
HCG18-235ENST00000426882 URB1-AS1Q96HZ7 61 aa14.62□□□□□ -0.07
HCG18-235ENST00000426882 SPANXB1Q9NS25 103 aaPredicted RBP14.61□□□□□ -0.07
HCG18-235ENST00000426882 ABCA12Q86UK0 2595 aa14.61□□□□□ -0.07
HCG18-235ENST00000426882 FAM236AA0A1B0GUQ0 79 aa14.61□□□□□ -0.07
HCG18-235ENST00000426882 FAM236BA0A1B0GV22 79 aa14.61□□□□□ -0.07
HCG18-235ENST00000426882 CITED1Q99966 193 aa14.61□□□□□ -0.07
HCG18-235ENST00000426882 FAM222AQ5U5X8 452 aa14.61□□□□□ -0.07
HCG18-235ENST00000426882 SPANXCQ9NY87 97 aa14.6□□□□□ -0.07
HCG18-235ENST00000426882 POLR2KP53803 58 aaKnown RBP14.59□□□□□ -0.07
HCG18-235ENST00000426882 Q8N976 141 aa14.59□□□□□ -0.07
HCG18-235ENST00000426882 JMJD7-PLA2G4BH0Y9G9 81 aa14.59□□□□□ -0.07
HCG18-235ENST00000426882 DCANP1Q8TF63 244 aa14.59□□□□□ -0.07
HCG18-235ENST00000426882 TRAV26-1A0A087WT03 109 aa14.59□□□□□ -0.07
HCG18-235ENST00000426882 LINC00269Q8N2A0 174 aa14.59□□□□□ -0.07
HCG18-235ENST00000426882 JMJD1CQ15652 2540 aa14.58□□□□□ -0.08
HCG18-235ENST00000426882 F8W735 103 aaPredicted RBP14.58□□□□□ -0.08
HCG18-235ENST00000426882 TSHBP01222 138 aa14.58□□□□□ -0.08
HCG18-235ENST00000426882 FUSP35637 526 aaKnown RBP eCLIP14.58□□□□□ -0.08
HCG18-235ENST00000426882 AVPP01185 164 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms