RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 HMGN4O00479 90 aa1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 RTL8CO15255 209 aa1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 LEPROTL1O95214 131 aa1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 IGHV3-30P01768 117 aa1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 C3orf79P0CE67 100 aa1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 IGHV3-30-5P0DP03 117 aa1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 IFI27P40305 119 aaPredicted RBP1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 Q6JHZ5 121 aa1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 BAGE3Q86Y29 109 aa1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 BAGE2Q86Y30 109 aa1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 MAPK1IP1LQ8NDC0 245 aa1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 PATE1Q8WXA2 126 aa1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 ARL2-SNX15V9GYD0 113 aa1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 MAP2P11137 1827 aaKnown RBP1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 EML5Q05BV3 1969 aa1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 EXPH5Q8NEV8 1989 aa1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 CPAMD8Q8IZJ3 1885 aa1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 LRRC37A3O60309 1634 aa1.88□□□□□ -2.11
CTDSPL-203ENST00000416688 STRCP1A6NGW2 1772 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 LAMB2P55268 1798 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 EHBP1L1Q8N3D4 1523 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 SCN4AP35499 1836 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 AFDNP55196 1824 aaKnown RBP1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 DOCK2Q92608 1830 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 MED12LQ86YW9 2145 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 ABCA7Q8IZY2 2146 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 IGLV4-60A0A075B6I1 120 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 PPP1R17O96001 155 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 DNAL4O96015 105 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 HMGA2P52926 109 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 SPAG11BQ08648 103 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 ITSN1Q15811 1721 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 SDK2Q58EX2 2172 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 FAM74A4Q5TZK3 123 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 SPAG11AQ6PDA7 123 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 KRTAP9-8Q9BYQ0 159 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 GFRA4Q9GZZ7 299 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 R4GMQ9 66 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 RALGAPBQ86X10 1494 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 CASP8AP2Q9UKL3 1982 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 BTAF1O14981 1849 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 LTBP2Q14767 1821 aa1.87□□□□□ -2.11
CTDSPL-203ENST00000416688 MYOM1P52179 1685 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 TRPM7Q96QT4 1865 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 MYO16Q9Y6X6 1858 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 UBR1Q8IWV7 1749 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 A0A1B0GUL6 1792 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 ARFGEF2Q9Y6D5 1785 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 FXYD6-FXYD2A0A087WZ82 144 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 FAM223BA6NKX1 122 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 D6R8Y8 96 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 H3BVH4 76 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 IGKV3-15P01624 115 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 ARMS2P0C7Q2 107 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 DEFB134Q4QY38 66 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 MUSTN1Q8IVN3 82 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 FXYD6Q9H0Q3 95 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 PSENENQ9NZ42 101 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 HILPDAQ9Y5L2 63 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 COL4A6Q14031 1691 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 SLIT2O94813 1529 aa1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 XRN1Q8IZH2 1706 aaKnown RBP1.86□□□□□ -2.11
CTDSPL-203ENST00000416688 COL11A1P12107 1806 aaPredicted RBP1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 TUBGCP6Q96RT7 1819 aa1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 IGKV3-7A0A075B6H7 116 aa1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 A0A087WYN8 130 aa1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 JMJD7-PLA2G4BH0Y9G9 81 aa1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 PDE6GP18545 87 aa1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 ATXN8Q156A1 80 aa1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 MRGPRG-AS1Q2M3A8 158 aa1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 KRTAP7-1Q8IUC3 87 aa1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 PRR34Q9NV39 138 aa1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 CCL26Q9Y258 94 aa1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 UBE2D4Q9Y2X8 147 aa1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 ZNF142P52746 1687 aaPredicted RBP1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 KIF1AQ12756 1690 aa1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 CDC42BPBQ9Y5S2 1711 aa1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 LRRC7Q96NW7 1537 aa1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 GLI2P10070 1586 aa1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 UGGT1Q9NYU2 1555 aa1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 MAST1Q9Y2H9 1570 aa1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 KIAA0100Q14667 2235 aaKnown RBP1.85□□□□□ -2.11
CTDSPL-203ENST00000416688 NINQ8N4C6 2090 aa1.84□□□□□ -2.11
CTDSPL-203ENST00000416688 HEATR5BQ9P2D3 2071 aa1.84□□□□□ -2.11
CTDSPL-203ENST00000416688 MED13Q9UHV7 2174 aa1.84□□□□□ -2.11
CTDSPL-203ENST00000416688 TRBV6-4A0A1B0GX49 114 aa1.84□□□□□ -2.11
CTDSPL-203ENST00000416688 PPYP01298 95 aa1.84□□□□□ -2.11
CTDSPL-203ENST00000416688 HRES1P13985 223 aa1.84□□□□□ -2.11
CTDSPL-203ENST00000416688 NDPQ00604 133 aa1.84□□□□□ -2.11
CTDSPL-203ENST00000416688 Q8N9L7 120 aa1.84□□□□□ -2.11
CTDSPL-203ENST00000416688 COX7B2Q8TF08 81 aa1.84□□□□□ -2.11
CTDSPL-203ENST00000416688 KLK9Q9UKQ9 250 aa1.84□□□□□ -2.11
CTDSPL-203ENST00000416688 ADGRB2O60241 1585 aa1.84□□□□□ -2.12
CTDSPL-203ENST00000416688 CROCC2H7BZ55 1655 aa1.83□□□□□ -2.12
CTDSPL-203ENST00000416688 ADAMTS7Q9UKP4 1686 aa1.83□□□□□ -2.12
CTDSPL-203ENST00000416688 COL5A3P25940 1745 aaPredicted RBP1.83□□□□□ -2.12
CTDSPL-203ENST00000416688 DOCK11Q5JSL3 2073 aa1.83□□□□□ -2.12
CTDSPL-203ENST00000416688 MYOFQ9NZM1 2061 aa1.83□□□□□ -2.12
CTDSPL-203ENST00000416688 A0A1W2PNU3 283 aaPredicted RBP1.83□□□□□ -2.12
CTDSPL-203ENST00000416688 CLPSL1A2RUU4 121 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 202.6 ms