RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 FAM223AQ8IWN6 122 aa12.05□□□□□ -0.48
COL4A3BP-204ENST00000405807 VCYO14598 125 aa12.04□□□□□ -0.48
COL4A3BP-204ENST00000405807 SOCS3O14543 225 aa12.04□□□□□ -0.48
COL4A3BP-204ENST00000405807 C5orf56Q8N8D9 126 aa12.04□□□□□ -0.48
COL4A3BP-204ENST00000405807 TIMM17AQ99595 171 aa12.04□□□□□ -0.48
COL4A3BP-204ENST00000405807 NXPH4O95158 308 aa12.03□□□□□ -0.48
COL4A3BP-204ENST00000405807 POLR2KP53803 58 aaKnown RBP12.03□□□□□ -0.48
COL4A3BP-204ENST00000405807 APRG1Q8IVJ8 170 aa12.03□□□□□ -0.48
COL4A3BP-204ENST00000405807 KIF25-AS1Q9Y6Z4 181 aa12.03□□□□□ -0.48
COL4A3BP-204ENST00000405807 TRIAP1O43715 76 aa12.03□□□□□ -0.48
COL4A3BP-204ENST00000405807 SYNJ2BPP57105 145 aa12.03□□□□□ -0.48
COL4A3BP-204ENST00000405807 LINC00315P59091 139 aa12.02□□□□□ -0.48
COL4A3BP-204ENST00000405807 ZFHX2Q9C0A1 2572 aaPredicted RBP12.02□□□□□ -0.48
COL4A3BP-204ENST00000405807 LRBAP50851 2863 aa12.02□□□□□ -0.49
COL4A3BP-204ENST00000405807 NDUFA4O00483 81 aa12.02□□□□□ -0.49
COL4A3BP-204ENST00000405807 DEFB1P60022 68 aa12.02□□□□□ -0.49
COL4A3BP-204ENST00000405807 FHL2Q14192 279 aa12.02□□□□□ -0.49
COL4A3BP-204ENST00000405807 AKAP13Q12802 2813 aa12.02□□□□□ -0.49
COL4A3BP-204ENST00000405807 CCL21O00585 134 aa12.01□□□□□ -0.49
COL4A3BP-204ENST00000405807 RPL11P62913 178 aaKnown RBP12.01□□□□□ -0.49
COL4A3BP-204ENST00000405807 UNQ9165/PRO28630Q6UXU0 137 aa12.01□□□□□ -0.49
COL4A3BP-204ENST00000405807 EPM2AB3EWF7 344 aa12.01□□□□□ -0.49
COL4A3BP-204ENST00000405807 TSPEAR-AS2P59090 65 aa12.01□□□□□ -0.49
COL4A3BP-204ENST00000405807 DCHS2Q6V1P9 2916 aa12.01□□□□□ -0.49
COL4A3BP-204ENST00000405807 CUBNO60494 3623 aa12.01□□□□□ -0.49
COL4A3BP-204ENST00000405807 TRBV30A0A0K0K1B3 111 aa12.01□□□□□ -0.49
COL4A3BP-204ENST00000405807 LGALS3P17931 250 aaKnown RBP12.01□□□□□ -0.49
COL4A3BP-204ENST00000405807 RPL39P62891 51 aaKnown RBP12.01□□□□□ -0.49
COL4A3BP-204ENST00000405807 ZNF876PQ49A33 203 aa12.01□□□□□ -0.49
COL4A3BP-204ENST00000405807 A0A0B4J2C4 111 aa12□□□□□ -0.49
COL4A3BP-204ENST00000405807 F6UB75 175 aa12□□□□□ -0.49
COL4A3BP-204ENST00000405807 NDUFC2O95298 119 aa12□□□□□ -0.49
COL4A3BP-204ENST00000405807 SUMO4Q6EEV6 95 aa12□□□□□ -0.49
COL4A3BP-204ENST00000405807 SERP1Q9Y6X1 66 aa12□□□□□ -0.49
COL4A3BP-204ENST00000405807 CACNA1BQ00975 2339 aa11.99□□□□□ -0.49
COL4A3BP-204ENST00000405807 F5H697 171 aa11.99□□□□□ -0.49
COL4A3BP-204ENST00000405807 SDIM1Q6ZPB5 146 aa11.99□□□□□ -0.49
COL4A3BP-204ENST00000405807 Q96MF0 132 aa11.99□□□□□ -0.49
COL4A3BP-204ENST00000405807 C19orf54Q5BKX5 351 aa11.98□□□□□ -0.49
COL4A3BP-204ENST00000405807 FP248Q71RG6 208 aaPredicted RBP11.98□□□□□ -0.49
COL4A3BP-204ENST00000405807 AMELXQ99217 191 aa11.98□□□□□ -0.49
COL4A3BP-204ENST00000405807 MOB4Q9Y3A3 225 aa11.98□□□□□ -0.49
COL4A3BP-204ENST00000405807 SDHAF1A6NFY7 115 aa11.98□□□□□ -0.49
COL4A3BP-204ENST00000405807 CIRBPQ14011 172 aaKnown RBP11.98□□□□□ -0.49
COL4A3BP-204ENST00000405807 DEFB104AQ8WTQ1 72 aa11.98□□□□□ -0.49
COL4A3BP-204ENST00000405807 NDUFC2-KCTD14E9PQ53 114 aa11.97□□□□□ -0.49
COL4A3BP-204ENST00000405807 TRBV27A0A0K0K1C4 114 aa11.97□□□□□ -0.49
COL4A3BP-204ENST00000405807 TRBV12-3P01733 135 aa11.97□□□□□ -0.49
COL4A3BP-204ENST00000405807 PMAIP1Q13794 54 aa11.96□□□□□ -0.49
COL4A3BP-204ENST00000405807 TMEM243Q9BU79 118 aa11.96□□□□□ -0.49
COL4A3BP-204ENST00000405807 A0A087WWL8 130 aa11.96□□□□□ -0.49
COL4A3BP-204ENST00000405807 TRBV6-5A0A0K0K1A5 114 aa11.96□□□□□ -0.5
COL4A3BP-204ENST00000405807 LEPROTO15243 131 aa11.96□□□□□ -0.5
COL4A3BP-204ENST00000405807 CLEC2BQ92478 149 aa11.96□□□□□ -0.5
COL4A3BP-204ENST00000405807 IGKV3-7A0A075B6H7 116 aa11.95□□□□□ -0.5
COL4A3BP-204ENST00000405807 SMIM26A0A096LP01 95 aa11.95□□□□□ -0.5
COL4A3BP-204ENST00000405807 TMEM223A0PJW6 202 aa11.95□□□□□ -0.5
COL4A3BP-204ENST00000405807 KLLNB2CW77 178 aa11.95□□□□□ -0.5
COL4A3BP-204ENST00000405807 MED13LQ71F56 2210 aa11.95□□□□□ -0.5
COL4A3BP-204ENST00000405807 PRSS2P07478 247 aa11.94□□□□□ -0.5
COL4A3BP-204ENST00000405807 USMG5Q96IX5 58 aa11.94□□□□□ -0.5
COL4A3BP-204ENST00000405807 IGHV1-69P01742 117 aa11.94□□□□□ -0.5
COL4A3BP-204ENST00000405807 ADORA2A-AS1P86434 159 aa11.94□□□□□ -0.5
COL4A3BP-204ENST00000405807 MUC4Q99102 2169 aa11.93□□□□□ -0.5
COL4A3BP-204ENST00000405807 TRAV8-3A0A0A6YYJ7 113 aa11.93□□□□□ -0.5
COL4A3BP-204ENST00000405807 RHPN1-AS1Q9BWJ2 59 aa11.93□□□□□ -0.5
COL4A3BP-204ENST00000405807 COX6CP09669 75 aa11.93□□□□□ -0.5
COL4A3BP-204ENST00000405807 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.92□□□□□ -0.5
COL4A3BP-204ENST00000405807 LMO4P61968 165 aa11.92□□□□□ -0.5
COL4A3BP-204ENST00000405807 MUSTN1Q8IVN3 82 aa11.92□□□□□ -0.5
COL4A3BP-204ENST00000405807 DCANP1Q8TF63 244 aa11.92□□□□□ -0.5
COL4A3BP-204ENST00000405807 CEP295Q9C0D2 2601 aa11.92□□□□□ -0.5
COL4A3BP-204ENST00000405807 C4orf48Q5BLP8 95 aa11.92□□□□□ -0.5
COL4A3BP-204ENST00000405807 TIMM21Q9BVV7 248 aa11.92□□□□□ -0.5
COL4A3BP-204ENST00000405807 ICOSQ9Y6W8 199 aa11.92□□□□□ -0.5
COL4A3BP-204ENST00000405807 ZNF292O60281 2723 aa11.91□□□□□ -0.5
COL4A3BP-204ENST00000405807 IGHV3-11P01762 117 aa11.91□□□□□ -0.5
COL4A3BP-204ENST00000405807 FAM74A4Q5TZK3 123 aa11.91□□□□□ -0.5
COL4A3BP-204ENST00000405807 USP17L23D6RBM5 183 aa11.91□□□□□ -0.5
COL4A3BP-204ENST00000405807 H3BUA1 57 aa11.91□□□□□ -0.5
COL4A3BP-204ENST00000405807 LST1O00453 97 aa11.91□□□□□ -0.5
COL4A3BP-204ENST00000405807 DAZ4Q86SG3 579 aaKnown RBP11.91□□□□□ -0.5
COL4A3BP-204ENST00000405807 DAZ1Q9NQZ3 744 aaKnown RBP11.91□□□□□ -0.5
COL4A3BP-204ENST00000405807 TLN1Q9Y490 2541 aaKnown RBP11.9□□□□□ -0.5
COL4A3BP-204ENST00000405807 TRAV12-3A0A0B4J271 114 aa11.9□□□□□ -0.5
COL4A3BP-204ENST00000405807 OPRPNQ99935 248 aaPredicted RBP11.9□□□□□ -0.5
COL4A3BP-204ENST00000405807 A0A0J9YX75 114 aa11.89□□□□□ -0.51
COL4A3BP-204ENST00000405807 SS18Q15532 418 aa11.89□□□□□ -0.51
COL4A3BP-204ENST00000405807 A0A087WVE0 104 aa11.89□□□□□ -0.51
COL4A3BP-204ENST00000405807 M0QY20 66 aa11.89□□□□□ -0.51
COL4A3BP-204ENST00000405807 BPESC1Q9GZL8 116 aa11.89□□□□□ -0.51
COL4A3BP-204ENST00000405807 KNCNA6PVL3 124 aa11.87□□□□□ -0.51
COL4A3BP-204ENST00000405807 C20orf203Q8NBC4 194 aa11.87□□□□□ -0.51
COL4A3BP-204ENST00000405807 IGHV3-64A0A075B6Q5 118 aa11.87□□□□□ -0.51
COL4A3BP-204ENST00000405807 IGHV3OR16-10A0A075B7F0 116 aa11.87□□□□□ -0.51
COL4A3BP-204ENST00000405807 IGHV3-16A0A0C4DH30 117 aa11.87□□□□□ -0.51
COL4A3BP-204ENST00000405807 A0A1W2PPR1 153 aa11.87□□□□□ -0.51
COL4A3BP-204ENST00000405807 CD164Q04900 197 aa11.87□□□□□ -0.51
COL4A3BP-204ENST00000405807 LINC00474Q9P2X8 69 aa11.87□□□□□ -0.51
COL4A3BP-204ENST00000405807 IGKV3D-7A0A0C4DH55 119 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms