RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 DAZ1Q9NQZ3 744 aaKnown RBP11.85□□□□□ -0.51
CHMP1A-201ENST00000397901 LOC107984640A0A0U1RRK4 108 aa11.84□□□□□ -0.51
CHMP1A-201ENST00000397901 IGKV3-20P01619 116 aa11.84□□□□□ -0.51
CHMP1A-201ENST00000397901 IGHG2P01859 326 aa11.84□□□□□ -0.51
CHMP1A-201ENST00000397901 COX6CP09669 75 aa11.84□□□□□ -0.51
CHMP1A-201ENST00000397901 HERVK_113P63121 156 aa11.84□□□□□ -0.51
CHMP1A-201ENST00000397901 ICOSQ9Y6W8 199 aa11.84□□□□□ -0.51
CHMP1A-201ENST00000397901 TMEM223A0PJW6 202 aa11.84□□□□□ -0.51
CHMP1A-201ENST00000397901 LINC00526Q96FQ7 95 aa11.84□□□□□ -0.51
CHMP1A-201ENST00000397901 IGHV4-61A0A0C4DH41 118 aa11.83□□□□□ -0.52
CHMP1A-201ENST00000397901 ACYP1P07311 99 aa11.83□□□□□ -0.52
CHMP1A-201ENST00000397901 CCL19Q99731 98 aa11.83□□□□□ -0.52
CHMP1A-201ENST00000397901 OPRPNQ99935 248 aaPredicted RBP11.83□□□□□ -0.52
CHMP1A-201ENST00000397901 SPANXCQ9NY87 97 aa11.83□□□□□ -0.52
CHMP1A-201ENST00000397901 A0A0J9YX75 114 aa11.83□□□□□ -0.52
CHMP1A-201ENST00000397901 PIMREGQ9BSJ6 248 aa11.83□□□□□ -0.52
CHMP1A-201ENST00000397901 DOPEY1Q5JWR5 2465 aa11.83□□□□□ -0.52
CHMP1A-201ENST00000397901 TRAV12-2A0A075B6T6 113 aa11.82□□□□□ -0.52
CHMP1A-201ENST00000397901 ATP5G1P05496 136 aa11.82□□□□□ -0.52
CHMP1A-201ENST00000397901 C10orf105Q8TEF2 133 aa11.82□□□□□ -0.52
CHMP1A-201ENST00000397901 FAM19A5Q7Z5A7 132 aaPredicted RBP11.82□□□□□ -0.52
CHMP1A-201ENST00000397901 USP9XQ93008 2570 aaPredicted RBP11.82□□□□□ -0.52
CHMP1A-201ENST00000397901 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.81□□□□□ -0.521e-6■■■□□ 14.7
CHMP1A-201ENST00000397901 H3BUA1 57 aa11.81□□□□□ -0.52
CHMP1A-201ENST00000397901 WIPF1O43516 503 aa11.81□□□□□ -0.52
CHMP1A-201ENST00000397901 ZNF22P17026 224 aaPredicted RBP11.81□□□□□ -0.52
CHMP1A-201ENST00000397901 A6NDX4 124 aa11.81□□□□□ -0.52
CHMP1A-201ENST00000397901 CEMP1Q6PRD7 247 aaPredicted RBP11.81□□□□□ -0.52
CHMP1A-201ENST00000397901 SPG11Q96JI7 2443 aa11.81□□□□□ -0.52
CHMP1A-201ENST00000397901 CELSR2Q9HCU4 2923 aa11.8□□□□□ -0.52
CHMP1A-201ENST00000397901 DCANP1Q8TF63 244 aa11.8□□□□□ -0.52
CHMP1A-201ENST00000397901 IGHV3-64A0A075B6Q5 118 aa11.8□□□□□ -0.52
CHMP1A-201ENST00000397901 LST1O00453 97 aa11.8□□□□□ -0.52
CHMP1A-201ENST00000397901 ACACBO00763 2458 aa11.79□□□□□ -0.52
CHMP1A-201ENST00000397901 TRBV27A0A0K0K1C4 114 aa11.79□□□□□ -0.52
CHMP1A-201ENST00000397901 RPS28P62857 69 aaKnown RBP11.79□□□□□ -0.52
CHMP1A-201ENST00000397901 UTP20O75691 2785 aaKnown RBP11.79□□□□□ -0.52
CHMP1A-201ENST00000397901 IGHV3-16A0A0C4DH30 117 aa11.78□□□□□ -0.52
CHMP1A-201ENST00000397901 A0A0J9YXY3 114 aa11.78□□□□□ -0.52
CHMP1A-201ENST00000397901 IGLV1-40P01703 118 aa11.78□□□□□ -0.52
CHMP1A-201ENST00000397901 LINC00643Q86TS7 51 aa11.78□□□□□ -0.52
CHMP1A-201ENST00000397901 OR13C6PQ8NH95 151 aa11.78□□□□□ -0.52
CHMP1A-201ENST00000397901 IGHV4-30-2A0A087WSY4 118 aa11.77□□□□□ -0.53
CHMP1A-201ENST00000397901 CLEC2BQ92478 149 aa11.77□□□□□ -0.53
CHMP1A-201ENST00000397901 CRYBG3Q68DQ2 2970 aa11.77□□□□□ -0.53
CHMP1A-201ENST00000397901 SORL1Q92673 2214 aa11.77□□□□□ -0.53
CHMP1A-201ENST00000397901 CSPG4Q6UVK1 2322 aa11.77□□□□□ -0.53
CHMP1A-201ENST00000397901 M0QY20 66 aa11.77□□□□□ -0.53
CHMP1A-201ENST00000397901 C9orf85Q96MD7 179 aa11.77□□□□□ -0.53
CHMP1A-201ENST00000397901 TRAV25A0A0B4J276 109 aa11.76□□□□□ -0.53
CHMP1A-201ENST00000397901 TRBV6-5A0A0K0K1A5 114 aa11.76□□□□□ -0.53
CHMP1A-201ENST00000397901 COX7CP15954 63 aa11.76□□□□□ -0.53
CHMP1A-201ENST00000397901 SPINK13Q1W4C9 94 aa11.76□□□□□ -0.53
CHMP1A-201ENST00000397901 C10orf99Q6UWK7 81 aa11.76□□□□□ -0.53
CHMP1A-201ENST00000397901 KLK5Q9Y337 293 aaPredicted RBP11.75□□□□□ -0.53
CHMP1A-201ENST00000397901 K7EMT4 169 aa11.75□□□□□ -0.53
CHMP1A-201ENST00000397901 LITAFQ99732 161 aa11.75□□□□□ -0.53
CHMP1A-201ENST00000397901 PRSS2P07478 247 aa11.74□□□□□ -0.53
CHMP1A-201ENST00000397901 GAGE2AQ6NT46 116 aa11.74□□□□□ -0.53
CHMP1A-201ENST00000397901 USP24Q9UPU5 2620 aa11.74□□□□□ -0.53
CHMP1A-201ENST00000397901 MYO18BQ8IUG5 2567 aa11.74□□□□□ -0.53
CHMP1A-201ENST00000397901 CXCL5P42830 114 aa11.74□□□□□ -0.53
CHMP1A-201ENST00000397901 CFHR3Q02985 330 aa11.74□□□□□ -0.53
CHMP1A-201ENST00000397901 ZNF580Q9UK33 172 aa11.74□□□□□ -0.53
CHMP1A-201ENST00000397901 I3L3M4 83 aa11.73□□□□□ -0.53
CHMP1A-201ENST00000397901 CRYGAP11844 174 aa11.73□□□□□ -0.53
CHMP1A-201ENST00000397901 NSUN5P1Q3KNT7 163 aa11.73□□□□□ -0.53
CHMP1A-201ENST00000397901 IGHV1OR15-1A0A075B7D0 117 aa11.72□□□□□ -0.53
CHMP1A-201ENST00000397901 TRAV8-3A0A0A6YYJ7 113 aa11.72□□□□□ -0.53
CHMP1A-201ENST00000397901 A0A0J9YXV3 536 aa11.72□□□□□ -0.53
CHMP1A-201ENST00000397901 SMCR5Q8TEV8 140 aa11.72□□□□□ -0.53
CHMP1A-201ENST00000397901 EPG5Q9HCE0 2579 aa11.72□□□□□ -0.53
CHMP1A-201ENST00000397901 RHOHQ15669 191 aa11.72□□□□□ -0.53
CHMP1A-201ENST00000397901 DOPEY2Q9Y3R5 2298 aa11.72□□□□□ -0.53
CHMP1A-201ENST00000397901 AVPP01185 164 aa11.71□□□□□ -0.53
CHMP1A-201ENST00000397901 MSMBP08118 114 aa11.71□□□□□ -0.53
CHMP1A-201ENST00000397901 SNRPD3P62318 126 aaKnown RBP11.71□□□□□ -0.53
CHMP1A-201ENST00000397901 C20orf203Q8NBC4 194 aa11.71□□□□□ -0.53
CHMP1A-201ENST00000397901 EDA2RQ9HAV5 297 aa11.71□□□□□ -0.53
CHMP1A-201ENST00000397901 C5orf38Q86SI9 138 aa11.71□□□□□ -0.53
CHMP1A-201ENST00000397901 CREBBPQ92793 2442 aa11.71□□□□□ -0.54
CHMP1A-201ENST00000397901 IGHV3-73A0A0B4J1V6 119 aa11.7□□□□□ -0.54
CHMP1A-201ENST00000397901 HTN1P15515 57 aa11.7□□□□□ -0.54
CHMP1A-201ENST00000397901 DUX5Q96PT3 197 aa11.7□□□□□ -0.54
CHMP1A-201ENST00000397901 ADARB2-AS1A8MUL3 147 aa11.7□□□□□ -0.54
CHMP1A-201ENST00000397901 IGHV3-30-3P0DP02 117 aa11.7□□□□□ -0.54
CHMP1A-201ENST00000397901 MIAQ16674 131 aa11.7□□□□□ -0.54
CHMP1A-201ENST00000397901 SDIM1Q6ZPB5 146 aa11.7□□□□□ -0.54
CHMP1A-201ENST00000397901 IGLV4-3A0A075B6K6 122 aa11.69□□□□□ -0.54
CHMP1A-201ENST00000397901 PSMB8P28062 276 aa11.69□□□□□ -0.54
CHMP1A-201ENST00000397901 C2orf48Q96LS8 159 aa11.69□□□□□ -0.54
CHMP1A-201ENST00000397901 CSMD2Q7Z408 3487 aa11.69□□□□□ -0.54
CHMP1A-201ENST00000397901 PRB1P04280 392 aa11.69□□□□□ -0.54
CHMP1A-201ENST00000397901 TMEM61Q8N0U2 210 aa11.69□□□□□ -0.54
CHMP1A-201ENST00000397901 K7EQG2 157 aa11.68□□□□□ -0.54
CHMP1A-201ENST00000397901 SYNJ2BPP57105 145 aa11.68□□□□□ -0.54
CHMP1A-201ENST00000397901 ADAMTSL4-AS1Q5T5F5 129 aa11.68□□□□□ -0.54
CHMP1A-201ENST00000397901 TIMM21Q9BVV7 248 aa11.68□□□□□ -0.54
CHMP1A-201ENST00000397901 ZFYVE26Q68DK2 2539 aa11.68□□□□□ -0.54
CHMP1A-201ENST00000397901 IGHV4-59P01825 116 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms