RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 LY96Q9Y6Y9 160 aa6.16□□□□□ -1.42
LIMS1-203ENST00000393310 TRGV4A0A0C4DH28 118 aa6.15□□□□□ -1.42
LIMS1-203ENST00000393310 SLC50A1Q9BRV3 221 aa6.15□□□□□ -1.42
LIMS1-203ENST00000393310 UBL5Q9BZL1 73 aa6.15□□□□□ -1.42
LIMS1-203ENST00000393310 C15orf61A6NNL5 157 aa6.15□□□□□ -1.42
LIMS1-203ENST00000393310 G3V318 75 aa6.15□□□□□ -1.42
LIMS1-203ENST00000393310 CCL1P22362 96 aa6.15□□□□□ -1.42
LIMS1-203ENST00000393310 Q6ZQT7 251 aa6.15□□□□□ -1.42
LIMS1-203ENST00000393310 C5orf38Q86SI9 138 aa6.15□□□□□ -1.42
LIMS1-203ENST00000393310 WFDC6Q9BQY6 131 aa6.15□□□□□ -1.42
LIMS1-203ENST00000393310 APELAP0DMC3 54 aa6.15□□□□□ -1.43
LIMS1-203ENST00000393310 CASC10Q5T4H9 136 aa6.15□□□□□ -1.43
LIMS1-203ENST00000393310 CFAP126Q5VTH2 177 aa6.15□□□□□ -1.43
LIMS1-203ENST00000393310 SOCS3O14543 225 aa6.15□□□□□ -1.43
LIMS1-203ENST00000393310 PLNP26678 52 aa6.15□□□□□ -1.43
LIMS1-203ENST00000393310 HCP5Q6MZN7 132 aa6.15□□□□□ -1.43
LIMS1-203ENST00000393310 TOMM6Q96B49 74 aa6.15□□□□□ -1.43
LIMS1-203ENST00000393310 ASH1LQ9NR48 2969 aaKnown RBP6.14□□□□□ -1.43
LIMS1-203ENST00000393310 TRBV10-2A0A0K0K1G8 114 aa6.14□□□□□ -1.43
LIMS1-203ENST00000393310 LGALS9O00182 355 aa6.14□□□□□ -1.43
LIMS1-203ENST00000393310 NDUFA3O95167 84 aa6.14□□□□□ -1.43
LIMS1-203ENST00000393310 MSMPQ1L6U9 139 aa6.14□□□□□ -1.43
LIMS1-203ENST00000393310 KIAA2026Q5HYC2 2103 aa6.14□□□□□ -1.43
LIMS1-203ENST00000393310 SAA2P0DJI9 122 aaPredicted RBP6.14□□□□□ -1.43
LIMS1-203ENST00000393310 Q8N9W7 124 aa6.14□□□□□ -1.43
LIMS1-203ENST00000393310 K7EMT4 169 aa6.14□□□□□ -1.43
LIMS1-203ENST00000393310 OVOL2Q9BRP0 275 aa6.14□□□□□ -1.43
LIMS1-203ENST00000393310 SORL1Q92673 2214 aa6.14□□□□□ -1.43
LIMS1-203ENST00000393310 DYSFO75923 2080 aa6.14□□□□□ -1.43
LIMS1-203ENST00000393310 LAGE3Q14657 143 aa6.13□□□□□ -1.43
LIMS1-203ENST00000393310 ORMDL3Q8N138 153 aa6.13□□□□□ -1.43
LIMS1-203ENST00000393310 TMEM190Q8WZ59 177 aa6.13□□□□□ -1.43
LIMS1-203ENST00000393310 CLEC2BQ92478 149 aa6.13□□□□□ -1.43
LIMS1-203ENST00000393310 ZNF706Q9Y5V0 76 aaPredicted RBP6.13□□□□□ -1.43
LIMS1-203ENST00000393310 HIGD1CA8MV81 97 aa6.13□□□□□ -1.43
LIMS1-203ENST00000393310 ZNF876PQ49A33 203 aa6.13□□□□□ -1.43
LIMS1-203ENST00000393310 ZNF497Q6ZNH5 498 aa6.13□□□□□ -1.43
LIMS1-203ENST00000393310 NPBQ8NG41 125 aa6.13□□□□□ -1.43
LIMS1-203ENST00000393310 C2orf70A6NJV1 201 aa6.13□□□□□ -1.43
LIMS1-203ENST00000393310 PLA2G1BP04054 148 aaKnown RBP6.13□□□□□ -1.43
LIMS1-203ENST00000393310 EGFEM1PQ0D2K5 195 aa6.13□□□□□ -1.43
LIMS1-203ENST00000393310 KTN1-AS1Q86SY8 53 aa6.13□□□□□ -1.43
LIMS1-203ENST00000393310 SCRT1Q9BWW7 348 aa6.13□□□□□ -1.43
LIMS1-203ENST00000393310 TRBV25-1A0A075B6N4 114 aa6.13□□□□□ -1.43
LIMS1-203ENST00000393310 SCO2A0A1W2PP80 73 aa6.13□□□□□ -1.43
LIMS1-203ENST00000393310 INS-IGF2F8WCM5 200 aa6.13□□□□□ -1.43
LIMS1-203ENST00000393310 ARHGAP5-AS1Q96IT6 56 aa6.13□□□□□ -1.43
LIMS1-203ENST00000393310 A0A1B0GUT8 65 aa6.12□□□□□ -1.43
LIMS1-203ENST00000393310 PPP1R17O96001 155 aa6.12□□□□□ -1.43
LIMS1-203ENST00000393310 IGKV3D-7A0A0C4DH55 119 aa6.12□□□□□ -1.43
LIMS1-203ENST00000393310 POM121L12Q8N7R1 296 aa6.12□□□□□ -1.43
LIMS1-203ENST00000393310 M0R381 172 aa6.12□□□□□ -1.43
LIMS1-203ENST00000393310 IGLV1-47P01700 117 aa6.11□□□□□ -1.43
LIMS1-203ENST00000393310 IGLV1-51P01701 117 aa6.11□□□□□ -1.43
LIMS1-203ENST00000393310 DEFB130BP0DP73 79 aa6.11□□□□□ -1.43
LIMS1-203ENST00000393310 DEFB130AP0DP74 79 aa6.11□□□□□ -1.43
LIMS1-203ENST00000393310 C2orf83Q53S99 150 aa6.11□□□□□ -1.43
LIMS1-203ENST00000393310 SOSTDC1Q6X4U4 206 aa6.11□□□□□ -1.43
LIMS1-203ENST00000393310 PCP2Q8IVA1 136 aa6.11□□□□□ -1.43
LIMS1-203ENST00000393310 A6NED7 52 aa6.11□□□□□ -1.43
LIMS1-203ENST00000393310 TFF1P04155 84 aa6.11□□□□□ -1.43
LIMS1-203ENST00000393310 ARL14EPLP0DKL9 152 aa6.11□□□□□ -1.43
LIMS1-203ENST00000393310 EBI3Q14213 229 aa6.11□□□□□ -1.43
LIMS1-203ENST00000393310 A0A0J9YWU9 116 aa6.11□□□□□ -1.43
LIMS1-203ENST00000393310 ZNF73O43830 326 aaPredicted RBP6.11□□□□□ -1.43
LIMS1-203ENST00000393310 CFC1BP0CG36 223 aa6.11□□□□□ -1.43
LIMS1-203ENST00000393310 CFC1P0CG37 223 aa6.11□□□□□ -1.43
LIMS1-203ENST00000393310 TMEM75Q8N9X5 138 aa6.11□□□□□ -1.43
LIMS1-203ENST00000393310 CHKB-CPT1BH3BT56 60 aa6.1□□□□□ -1.43
LIMS1-203ENST00000393310 LINC01590Q5TEZ4 76 aa6.1□□□□□ -1.43
LIMS1-203ENST00000393310 LCA10Q71F78 164 aa6.1□□□□□ -1.43
LIMS1-203ENST00000393310 DAND5Q8N907 189 aa6.1□□□□□ -1.43
LIMS1-203ENST00000393310 CELSR1Q9NYQ6 3014 aa6.1□□□□□ -1.43
LIMS1-203ENST00000393310 A0A0A0MQY5 61 aa6.1□□□□□ -1.43
LIMS1-203ENST00000393310 NXPH4O95158 308 aa6.1□□□□□ -1.43
LIMS1-203ENST00000393310 IGKV3-20P01619 116 aa6.1□□□□□ -1.43
LIMS1-203ENST00000393310 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.1□□□□□ -1.43
LIMS1-203ENST00000393310 LHFPL1Q86WI0 220 aa6.1□□□□□ -1.43
LIMS1-203ENST00000393310 ICOSQ9Y6W8 199 aa6.1□□□□□ -1.43
LIMS1-203ENST00000393310 NBEAL1Q6ZS30 2694 aa6.1□□□□□ -1.43
LIMS1-203ENST00000393310 IGHV3-35A0A0C4DH35 117 aa6.09□□□□□ -1.43
LIMS1-203ENST00000393310 SS18Q15532 418 aa6.09□□□□□ -1.43
LIMS1-203ENST00000393310 RPL39P5Q59GN2 51 aa6.09□□□□□ -1.43
LIMS1-203ENST00000393310 RBM12B-AS1Q9P1G2 102 aa6.09□□□□□ -1.43
LIMS1-203ENST00000393310 DEFB114Q30KQ6 69 aa6.09□□□□□ -1.43
LIMS1-203ENST00000393310 IGHV7-4-1A0A0J9YVY3 117 aa6.09□□□□□ -1.43
LIMS1-203ENST00000393310 RPP21Q9H633 154 aaKnown RBP6.09□□□□□ -1.43
LIMS1-203ENST00000393310 NBEAQ8NFP9 2946 aa6.09□□□□□ -1.43
LIMS1-203ENST00000393310 ZZEF1O43149 2961 aa6.09□□□□□ -1.44
LIMS1-203ENST00000393310 IGHV7-81A0A0B4J1V7 117 aa6.09□□□□□ -1.44
LIMS1-203ENST00000393310 TRBV7-7A0A0K0K1E9 115 aa6.09□□□□□ -1.44
LIMS1-203ENST00000393310 SAA1P0DJI8 122 aaPredicted RBP6.09□□□□□ -1.44
LIMS1-203ENST00000393310 Q6ZSR3 168 aa6.09□□□□□ -1.44
LIMS1-203ENST00000393310 COX8CQ7Z4L0 72 aa6.09□□□□□ -1.44
LIMS1-203ENST00000393310 TRAV13-2A0A0B4J235 113 aa6.08□□□□□ -1.44
LIMS1-203ENST00000393310 MRGPRG-AS1Q2M3A8 158 aa6.08□□□□□ -1.44
LIMS1-203ENST00000393310 ZNF833PQ6ZTB9 187 aa6.08□□□□□ -1.44
LIMS1-203ENST00000393310 SBSPONQ8IVN8 264 aa6.08□□□□□ -1.44
LIMS1-203ENST00000393310 COL12A1Q99715 3063 aa6.08□□□□□ -1.44
LIMS1-203ENST00000393310 PPYP01298 95 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms