RNA–Protein interactions for RNA: ENST00000385268.1

MIR549A-201, Transcript of microRNA 549a, humanhuman

BASIC

Gene MIR549A, Length 96 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR549A-201ENST00000385268 WNK3Q9BYP7 1800 aa-0.35□□□□□ -2.47
MIR549A-201ENST00000385268 KCNRGQ8N5I3 272 aa-0.35□□□□□ -2.47
MIR549A-201ENST00000385268 LZICQ8WZA0 190 aa-0.35□□□□□ -2.47
MIR549A-201ENST00000385268 NPVFQ9HCQ7 196 aa-0.35□□□□□ -2.47
MIR549A-201ENST00000385268 SCN3BQ9NY72 215 aa-0.35□□□□□ -2.47
MIR549A-201ENST00000385268 R4GMQ9 66 aa-0.35□□□□□ -2.47
MIR549A-201ENST00000385268 CSPG4Q6UVK1 2322 aa-0.35□□□□□ -2.47
MIR549A-201ENST00000385268 IFT172Q9UG01 1749 aa-0.35□□□□□ -2.47
MIR549A-201ENST00000385268 TNXBP22105 4242 aa-0.36□□□□□ -2.47
MIR549A-201ENST00000385268 SPTA1P02549 2419 aa-0.36□□□□□ -2.47
MIR549A-201ENST00000385268 SRRM2Q9UQ35 2752 aaKnown RBP-0.36□□□□□ -2.47
MIR549A-201ENST00000385268 PIGBOS1A0A0B4J2F0 54 aa-0.36□□□□□ -2.47
MIR549A-201ENST00000385268 SIX6O95475 246 aa-0.36□□□□□ -2.47
MIR549A-201ENST00000385268 SPRR1AP35321 89 aa-0.36□□□□□ -2.47
MIR549A-201ENST00000385268 PI4KAP42356 2102 aa-0.36□□□□□ -2.47
MIR549A-201ENST00000385268 SMIM4Q8WVI0 70 aa-0.36□□□□□ -2.47
MIR549A-201ENST00000385268 TCEAL4Q96EI5 215 aa-0.36□□□□□ -2.47
MIR549A-201ENST00000385268 GVINP1Q7Z2Y8 2422 aa-0.36□□□□□ -2.47
MIR549A-201ENST00000385268 PXDNQ92626 1479 aa-0.36□□□□□ -2.47
MIR549A-201ENST00000385268 PLXNB2O15031 1838 aa-0.36□□□□□ -2.47
MIR549A-201ENST00000385268 ATRQ13535 2644 aa-0.36□□□□□ -2.47
MIR549A-201ENST00000385268 PPRC1Q5VV67 1664 aaKnown RBP-0.37□□□□□ -2.47
MIR549A-201ENST00000385268 FHAD1B1AJZ9 1412 aa-0.37□□□□□ -2.47
MIR549A-201ENST00000385268 ARPC5O15511 151 aa-0.37□□□□□ -2.47
MIR549A-201ENST00000385268 CCL18P55774 89 aa-0.37□□□□□ -2.47
MIR549A-201ENST00000385268 SEC11CQ9BY50 192 aa-0.37□□□□□ -2.47
MIR549A-201ENST00000385268 COPZ2Q9P299 210 aa-0.37□□□□□ -2.47
MIR549A-201ENST00000385268 ZNF518AQ6AHZ1 1483 aa-0.37□□□□□ -2.47
MIR549A-201ENST00000385268 IFT140Q96RY7 1462 aa-0.37□□□□□ -2.47
MIR549A-201ENST00000385268 SETXQ7Z333 2677 aaKnown RBP-0.37□□□□□ -2.47
MIR549A-201ENST00000385268 KDM3BQ7LBC6 1761 aa-0.37□□□□□ -2.47
MIR549A-201ENST00000385268 MYO7BQ6PIF6 2116 aa-0.38□□□□□ -2.47
MIR549A-201ENST00000385268 SPAARA0A1B0GVQ0 90 aa-0.38□□□□□ -2.47
MIR549A-201ENST00000385268 BCE1O60756 84 aa-0.38□□□□□ -2.47
MIR549A-201ENST00000385268 PPP1R17O96001 155 aa-0.38□□□□□ -2.47
MIR549A-201ENST00000385268 PRM1P04553 51 aa-0.38□□□□□ -2.47
MIR549A-201ENST00000385268 COPZ1P61923 177 aa-0.38□□□□□ -2.47
MIR549A-201ENST00000385268 DCDP81605 110 aaKnown RBP-0.38□□□□□ -2.47
MIR549A-201ENST00000385268 SPAG11BQ08648 103 aa-0.38□□□□□ -2.47
MIR549A-201ENST00000385268 S100A7L2Q5SY68 101 aa-0.38□□□□□ -2.47
MIR549A-201ENST00000385268 TMEM191AQ9H0A3 160 aa-0.38□□□□□ -2.47
MIR549A-201ENST00000385268 CCDC167Q9P0B6 97 aa-0.38□□□□□ -2.47
MIR549A-201ENST00000385268 CHD8Q9HCK8 2581 aa-0.38□□□□□ -2.47
MIR549A-201ENST00000385268 ACANP16112 2415 aa-0.38□□□□□ -2.47
MIR549A-201ENST00000385268 GOLGA4Q13439 2230 aaKnown RBP-0.38□□□□□ -2.47
MIR549A-201ENST00000385268 CASKIN1Q8WXD9 1431 aa-0.38□□□□□ -2.47
MIR549A-201ENST00000385268 COL6A3P12111 3177 aa-0.39□□□□□ -2.47
MIR549A-201ENST00000385268 HCG22E2RYF7 251 aa-0.39□□□□□ -2.47
MIR549A-201ENST00000385268 M0R135 149 aa-0.39□□□□□ -2.47
MIR549A-201ENST00000385268 RPS25P62851 125 aaKnown RBP-0.39□□□□□ -2.47
MIR549A-201ENST00000385268 SMCO1Q147U7 214 aa-0.39□□□□□ -2.47
MIR549A-201ENST00000385268 TSTD1Q8NFU3 115 aa-0.39□□□□□ -2.47
MIR549A-201ENST00000385268 ANP32BQ92688 251 aaKnown RBP-0.39□□□□□ -2.47
MIR549A-201ENST00000385268 AQP10Q96PS8 301 aa-0.39□□□□□ -2.47
MIR549A-201ENST00000385268 SDF2Q99470 211 aa-0.39□□□□□ -2.47
MIR549A-201ENST00000385268 TPT1P8Q9HAU6 139 aa-0.39□□□□□ -2.47
MIR549A-201ENST00000385268 TP53AIP1Q9HCN2 124 aa-0.39□□□□□ -2.47
MIR549A-201ENST00000385268 MAP1AP78559 2803 aaPredicted RBP-0.39□□□□□ -2.47
MIR549A-201ENST00000385268 PDZD2O15018 2839 aa-0.4□□□□□ -2.47
MIR549A-201ENST00000385268 MYH8P13535 1937 aa-0.4□□□□□ -2.47
MIR549A-201ENST00000385268 NWD2Q9ULI1 1742 aa-0.4□□□□□ -2.47
MIR549A-201ENST00000385268 TRAV13-2A0A0B4J235 113 aa-0.4□□□□□ -2.47
MIR549A-201ENST00000385268 HAMPP81172 84 aa-0.4□□□□□ -2.47
MIR549A-201ENST00000385268 SMIM21Q3B7S5 101 aa-0.4□□□□□ -2.47
MIR549A-201ENST00000385268 COPS9Q8WXC6 57 aa-0.4□□□□□ -2.47
MIR549A-201ENST00000385268 LENEPQ9Y5L5 61 aa-0.4□□□□□ -2.47
MIR549A-201ENST00000385268 MUC2Q02817 5179 aa-0.4□□□□□ -2.47
MIR549A-201ENST00000385268 LRRC37A2A6NM11 1700 aa-0.41□□□□□ -2.47
MIR549A-201ENST00000385268 ANKRD17O75179 2603 aaKnown RBP-0.41□□□□□ -2.47
MIR549A-201ENST00000385268 FLNBO75369 2602 aaKnown RBP-0.41□□□□□ -2.47
MIR549A-201ENST00000385268 CTXND1A0A1B0GTU2 59 aa-0.41□□□□□ -2.48
MIR549A-201ENST00000385268 COX17Q14061 63 aa-0.41□□□□□ -2.48
MIR549A-201ENST00000385268 PIGYQ3MUY2 71 aa-0.41□□□□□ -2.48
MIR549A-201ENST00000385268 C10orf128Q5T292 105 aa-0.41□□□□□ -2.48
MIR549A-201ENST00000385268 SPAG11AQ6PDA7 123 aa-0.41□□□□□ -2.48
MIR549A-201ENST00000385268 MAFIPQ8WZ33 124 aa-0.41□□□□□ -2.48
MIR549A-201ENST00000385268 DPH3Q96FX2 82 aa-0.41□□□□□ -2.48
MIR549A-201ENST00000385268 PAIP2BQ9ULR5 123 aaKnown RBP-0.41□□□□□ -2.48
MIR549A-201ENST00000385268 C10orf71Q711Q0 1435 aa-0.41□□□□□ -2.48
MIR549A-201ENST00000385268 ERCC6L2Q5T890 1561 aa-0.41□□□□□ -2.48
MIR549A-201ENST00000385268 PRKDCP78527 4128 aaKnown RBP-0.41□□□□□ -2.48
MIR549A-201ENST00000385268 BCL9LQ86UU0 1499 aa-0.41□□□□□ -2.48
MIR549A-201ENST00000385268 TRBV6-1A0A0K0K1D8 114 aa-0.42□□□□□ -2.48
MIR549A-201ENST00000385268 C12orf73Q69YU5 71 aa-0.42□□□□□ -2.48
MIR549A-201ENST00000385268 PFDN5Q99471 154 aa-0.42□□□□□ -2.48
MIR549A-201ENST00000385268 AGPAT4-IT1Q9H0P7 198 aa-0.42□□□□□ -2.48
MIR549A-201ENST00000385268 URB1O60287 2271 aaKnown RBP-0.42□□□□□ -2.48
MIR549A-201ENST00000385268 EP300Q09472 2414 aaPredicted RBP-0.42□□□□□ -2.48
MIR549A-201ENST00000385268 PRDM2Q13029 1718 aa-0.42□□□□□ -2.48
MIR549A-201ENST00000385268 MRC1P22897 1456 aa-0.42□□□□□ -2.48
MIR549A-201ENST00000385268 LRP6O75581 1613 aa-0.42□□□□□ -2.48
MIR549A-201ENST00000385268 STAB2Q8WWQ8 2551 aa-0.43□□□□□ -2.48
MIR549A-201ENST00000385268 CEP152O94986 1710 aa-0.43□□□□□ -2.48
MIR549A-201ENST00000385268 NBEAL1Q6ZS30 2694 aa-0.43□□□□□ -2.48
MIR549A-201ENST00000385268 I3L2K1 104 aa-0.43□□□□□ -2.48
MIR549A-201ENST00000385268 TMEM170BQ5T4T1 132 aa-0.43□□□□□ -2.48
MIR549A-201ENST00000385268 TTC9CQ8N5M4 171 aa-0.43□□□□□ -2.48
MIR549A-201ENST00000385268 AMELXQ99217 191 aa-0.43□□□□□ -2.48
MIR549A-201ENST00000385268 V9GYH0 126 aa-0.43□□□□□ -2.48
MIR549A-201ENST00000385268 SYNE2Q8WXH0 6885 aaKnown RBP-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms