RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 PTPRQQ9UMZ3 2332 aa14.01□□□□□ -0.17
SMARCD1-201ENST00000381513 UNQ9165/PRO28630Q6UXU0 137 aa14□□□□□ -0.17
SMARCD1-201ENST00000381513 MRPS36P82909 103 aaKnown RBP14□□□□□ -0.17
SMARCD1-201ENST00000381513 HIST1H4AP62805 103 aaKnown RBP14□□□□□ -0.17
SMARCD1-201ENST00000381513 ATMQ13315 3056 aa13.99□□□□□ -0.17
SMARCD1-201ENST00000381513 PYGO1Q9Y3Y4 419 aa13.99□□□□□ -0.17
SMARCD1-201ENST00000381513 U3KQE9 123 aa13.99□□□□□ -0.17
SMARCD1-201ENST00000381513 SORL1Q92673 2214 aa13.98□□□□□ -0.17
SMARCD1-201ENST00000381513 Q5XG85 94 aa13.98□□□□□ -0.17
SMARCD1-201ENST00000381513 IGFL2Q6UWQ7 119 aa13.98□□□□□ -0.17
SMARCD1-201ENST00000381513 LINC00308Q8TCZ7 52 aa13.98□□□□□ -0.17
SMARCD1-201ENST00000381513 C14orf132Q9NPU4 83 aa13.98□□□□□ -0.17
SMARCD1-201ENST00000381513 USP17L23D6RBM5 183 aa13.98□□□□□ -0.17
SMARCD1-201ENST00000381513 TRAV12-2A0A075B6T6 113 aa13.97□□□□□ -0.17
SMARCD1-201ENST00000381513 TECTAO75443 2155 aa13.97□□□□□ -0.17
SMARCD1-201ENST00000381513 CREBBPQ92793 2442 aa13.97□□□□□ -0.17
SMARCD1-201ENST00000381513 COL6A6A6NMZ7 2263 aa13.97□□□□□ -0.17
SMARCD1-201ENST00000381513 IGHV3OR16-10A0A075B7F0 116 aa13.97□□□□□ -0.17
SMARCD1-201ENST00000381513 KLK9Q9UKQ9 250 aa13.97□□□□□ -0.17
SMARCD1-201ENST00000381513 HTN1P15515 57 aa13.96□□□□□ -0.17
SMARCD1-201ENST00000381513 FAM218AQ96MZ4 157 aa13.96□□□□□ -0.17
SMARCD1-201ENST00000381513 C1orf43Q9BWL3 253 aa13.96□□□□□ -0.17
SMARCD1-201ENST00000381513 Q9H8V8 135 aa13.96□□□□□ -0.17
SMARCD1-201ENST00000381513 SVEP1Q4LDE5 3571 aa13.96□□□□□ -0.17
SMARCD1-201ENST00000381513 PRIMA1Q86XR5 153 aa13.96□□□□□ -0.17
SMARCD1-201ENST00000381513 Q8N6K4 173 aa13.96□□□□□ -0.18
SMARCD1-201ENST00000381513 MALP21145 153 aa13.95□□□□□ -0.18
SMARCD1-201ENST00000381513 CDKN2A-AS1Q9UH64 79 aa13.95□□□□□ -0.18
SMARCD1-201ENST00000381513 EP300Q09472 2414 aaPredicted RBP13.95□□□□□ -0.18
SMARCD1-201ENST00000381513 ODF3BA8MYP8 253 aa13.94□□□□□ -0.18
SMARCD1-201ENST00000381513 TRBV12-3P01733 135 aa13.94□□□□□ -0.18
SMARCD1-201ENST00000381513 MRAPQ8TCY5 172 aa13.94□□□□□ -0.18
SMARCD1-201ENST00000381513 ACACAQ13085 2346 aa13.94□□□□□ -0.18
SMARCD1-201ENST00000381513 IGHV3-11P01762 117 aa13.94□□□□□ -0.18
SMARCD1-201ENST00000381513 MINOS1Q5TGZ0 78 aa13.94□□□□□ -0.18
SMARCD1-201ENST00000381513 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.93□□□□□ -0.18
SMARCD1-201ENST00000381513 IGKV2-29A2NJV5 120 aaPredicted RBP13.93□□□□□ -0.18
SMARCD1-201ENST00000381513 DMXL1Q9Y485 3027 aa13.93□□□□□ -0.18
SMARCD1-201ENST00000381513 COL27A1Q8IZC6 1860 aaPredicted RBP13.92□□□□□ -0.18
SMARCD1-201ENST00000381513 PIEZO2Q9H5I5 2752 aa13.92□□□□□ -0.18
SMARCD1-201ENST00000381513 UPK3BQ9BT76 320 aa13.92□□□□□ -0.18
SMARCD1-201ENST00000381513 LINC00846Q9NV44 126 aa13.92□□□□□ -0.18
SMARCD1-201ENST00000381513 TINCRA0A1B0GVN0 87 aa13.91□□□□□ -0.18
SMARCD1-201ENST00000381513 SOCS3O14543 225 aa13.9□□□□□ -0.18
SMARCD1-201ENST00000381513 TIMM17BO60830 172 aa13.9□□□□□ -0.18
SMARCD1-201ENST00000381513 PFN2P35080 140 aa13.9□□□□□ -0.18
SMARCD1-201ENST00000381513 DGAT2L7PQ6IED9 249 aa13.9□□□□□ -0.18
SMARCD1-201ENST00000381513 C22orf24Q9Y442 160 aa13.9□□□□□ -0.18
SMARCD1-201ENST00000381513 NBASA2RRP1 2371 aa13.9□□□□□ -0.18
SMARCD1-201ENST00000381513 IGHV3-16A0A0C4DH30 117 aa13.9□□□□□ -0.18
SMARCD1-201ENST00000381513 PKIGQ9Y2B9 76 aa13.9□□□□□ -0.18
SMARCD1-201ENST00000381513 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.89□□□□□ -0.19
SMARCD1-201ENST00000381513 FHL2Q14192 279 aa13.89□□□□□ -0.19
SMARCD1-201ENST00000381513 BEAN1Q3B7T3 259 aa13.89□□□□□ -0.19
SMARCD1-201ENST00000381513 FAM223AQ8IWN6 122 aa13.89□□□□□ -0.19
SMARCD1-201ENST00000381513 RHPN1-AS1Q9BWJ2 59 aa13.89□□□□□ -0.19
SMARCD1-201ENST00000381513 KLLNB2CW77 178 aa13.89□□□□□ -0.19
SMARCD1-201ENST00000381513 PROK1P58294 105 aa13.89□□□□□ -0.19
SMARCD1-201ENST00000381513 LINC01561Q8N1V8 128 aa13.89□□□□□ -0.19
SMARCD1-201ENST00000381513 LAMA5O15230 3695 aa13.89□□□□□ -0.19
SMARCD1-201ENST00000381513 CUL9Q8IWT3 2517 aa13.88□□□□□ -0.19
SMARCD1-201ENST00000381513 ANKHD1Q8IWZ3 2542 aaKnown RBP13.88□□□□□ -0.19
SMARCD1-201ENST00000381513 KNCNA6PVL3 124 aa13.88□□□□□ -0.19
SMARCD1-201ENST00000381513 NDUFA1O15239 70 aa13.88□□□□□ -0.19
SMARCD1-201ENST00000381513 UCNP55089 124 aa13.88□□□□□ -0.19
SMARCD1-201ENST00000381513 FAM222AQ5U5X8 452 aa13.88□□□□□ -0.19
SMARCD1-201ENST00000381513 SOSTDC1Q6X4U4 206 aa13.88□□□□□ -0.19
SMARCD1-201ENST00000381513 APRG1Q8IVJ8 170 aa13.88□□□□□ -0.19
SMARCD1-201ENST00000381513 TMEM243Q9BU79 118 aa13.88□□□□□ -0.19
SMARCD1-201ENST00000381513 FAM223BA6NKX1 122 aa13.87□□□□□ -0.19
SMARCD1-201ENST00000381513 PIK3CD-AS1Q5SR53 167 aa13.87□□□□□ -0.19
SMARCD1-201ENST00000381513 C9orf129Q5T035 196 aaKnown RBP13.87□□□□□ -0.19
SMARCD1-201ENST00000381513 LRBAP50851 2863 aa13.87□□□□□ -0.19
SMARCD1-201ENST00000381513 IGHV3-38A0A0C4DH36 116 aa13.87□□□□□ -0.19
SMARCD1-201ENST00000381513 FAM104AQ969W3 186 aa13.87□□□□□ -0.19
SMARCD1-201ENST00000381513 TTC28Q96AY4 2481 aa13.87□□□□□ -0.19
SMARCD1-201ENST00000381513 Q6JHZ5 121 aa13.86□□□□□ -0.19
SMARCD1-201ENST00000381513 C20orf197Q8N268 126 aa13.86□□□□□ -0.19
SMARCD1-201ENST00000381513 GHRHP01286 108 aa13.86□□□□□ -0.19
SMARCD1-201ENST00000381513 TRAV23DV6A0A075B6W5 121 aa13.85□□□□□ -0.19
SMARCD1-201ENST00000381513 HILS1P60008 231 aa13.85□□□□□ -0.19
SMARCD1-201ENST00000381513 WFDC9Q8NEX5 89 aa13.85□□□□□ -0.19
SMARCD1-201ENST00000381513 COPS9Q8WXC6 57 aa13.85□□□□□ -0.19
SMARCD1-201ENST00000381513 C9orf85Q96MD7 179 aa13.85□□□□□ -0.19
SMARCD1-201ENST00000381513 C2CD3Q4AC94 2353 aa13.85□□□□□ -0.19
SMARCD1-201ENST00000381513 RELNP78509 3460 aa13.85□□□□□ -0.19
SMARCD1-201ENST00000381513 J3QLI3 93 aa13.85□□□□□ -0.19
SMARCD1-201ENST00000381513 SPINK13Q1W4C9 94 aa13.85□□□□□ -0.19
SMARCD1-201ENST00000381513 LINC00336Q6ZUF6 198 aa13.85□□□□□ -0.19
SMARCD1-201ENST00000381513 LINC01560Q8TB33 94 aa13.85□□□□□ -0.19
SMARCD1-201ENST00000381513 SPTAN1Q13813 2472 aaKnown RBP13.84□□□□□ -0.19
SMARCD1-201ENST00000381513 MINOS1-NBL1R4GNA1 71 aa13.84□□□□□ -0.19
SMARCD1-201ENST00000381513 HIST2H2BCQ6DN03 193 aa13.83□□□□□ -0.2
SMARCD1-201ENST00000381513 HIST2H2BDQ6DRA6 164 aa13.83□□□□□ -0.2
SMARCD1-201ENST00000381513 Q9UF83 564 aa13.83□□□□□ -0.2
SMARCD1-201ENST00000381513 NCR3O14931 201 aa13.83□□□□□ -0.2
SMARCD1-201ENST00000381513 IGHG2P01859 326 aa13.83□□□□□ -0.2
SMARCD1-201ENST00000381513 CRPP02741 224 aa13.83□□□□□ -0.2
SMARCD1-201ENST00000381513 IGHV1OR15-1A0A075B7D0 117 aa13.82□□□□□ -0.2
SMARCD1-201ENST00000381513 NDUFA4O00483 81 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms