RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 C10orf142B7Z368 130 aa8.23□□□□□ -1.09
USP6NL-202ENST00000379237 IGLV1-47P01700 117 aa8.23□□□□□ -1.09
USP6NL-202ENST00000379237 SORL1Q92673 2214 aa8.23□□□□□ -1.09
USP6NL-202ENST00000379237 IGHG3P01860 377 aa8.23□□□□□ -1.09
USP6NL-202ENST00000379237 C20orf203Q8NBC4 194 aa8.23□□□□□ -1.09
USP6NL-202ENST00000379237 MSRB2Q9Y3D2 182 aa8.23□□□□□ -1.09
USP6NL-202ENST00000379237 LENEPQ9Y5L5 61 aa8.23□□□□□ -1.09
USP6NL-202ENST00000379237 J3QLI3 93 aa8.23□□□□□ -1.09
USP6NL-202ENST00000379237 TSHBP01222 138 aa8.23□□□□□ -1.09
USP6NL-202ENST00000379237 IGF2-ASQ6U949 168 aa8.23□□□□□ -1.09
USP6NL-202ENST00000379237 MBD3L2Q8NHZ7 208 aaPredicted RBP8.23□□□□□ -1.09
USP6NL-202ENST00000379237 PYGO1Q9Y3Y4 419 aa8.23□□□□□ -1.09
USP6NL-202ENST00000379237 CCDC168Q8NDH2 2452 aa8.23□□□□□ -1.09
USP6NL-202ENST00000379237 IGHV4-4A0A075B6R2 117 aa8.22□□□□□ -1.09
USP6NL-202ENST00000379237 PAX4O43316 350 aa8.22□□□□□ -1.09
USP6NL-202ENST00000379237 PRR9Q5T870 116 aa8.22□□□□□ -1.09
USP6NL-202ENST00000379237 MRPL53Q96EL3 112 aaKnown RBP8.22□□□□□ -1.09
USP6NL-202ENST00000379237 OTOGLQ3ZCN5 2332 aa8.22□□□□□ -1.09
USP6NL-202ENST00000379237 ADAMTSL4-AS1Q5T5F5 129 aa8.22□□□□□ -1.09
USP6NL-202ENST00000379237 VMO1Q7Z5L0 202 aa8.22□□□□□ -1.09
USP6NL-202ENST00000379237 UBL5Q9BZL1 73 aa8.22□□□□□ -1.09
USP6NL-202ENST00000379237 KLK9Q9UKQ9 250 aa8.22□□□□□ -1.09
USP6NL-202ENST00000379237 TRAV12-2A0A075B6T6 113 aa8.22□□□□□ -1.09
USP6NL-202ENST00000379237 IGHV3OR16-10A0A075B7F0 116 aa8.21□□□□□ -1.09
USP6NL-202ENST00000379237 IGHV3-38A0A0C4DH36 116 aa8.21□□□□□ -1.09
USP6NL-202ENST00000379237 ATP6V0E1O15342 81 aa8.21□□□□□ -1.09
USP6NL-202ENST00000379237 POM121L12Q8N7R1 296 aa8.21□□□□□ -1.09
USP6NL-202ENST00000379237 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.21□□□□□ -1.1
USP6NL-202ENST00000379237 IGKV2-29A2NJV5 120 aaPredicted RBP8.21□□□□□ -1.1
USP6NL-202ENST00000379237 C11orf68Q9H3H3 251 aaKnown RBP8.21□□□□□ -1.1
USP6NL-202ENST00000379237 PRO0628Q9UI54 55 aa8.21□□□□□ -1.1
USP6NL-202ENST00000379237 CFAP47Q6ZTR5 3102 aa8.21□□□□□ -1.1
USP6NL-202ENST00000379237 HAMPP81172 84 aa8.21□□□□□ -1.1
USP6NL-202ENST00000379237 PSMG3-AS1Q96PY0 264 aa8.21□□□□□ -1.1
USP6NL-202ENST00000379237 DKK4Q9UBT3 224 aa8.21□□□□□ -1.1
USP6NL-202ENST00000379237 IGLV4-3A0A075B6K6 122 aa8.2□□□□□ -1.1
USP6NL-202ENST00000379237 MRGPRG-AS1Q2M3A8 158 aa8.2□□□□□ -1.1
USP6NL-202ENST00000379237 LAMA5O15230 3695 aa8.2□□□□□ -1.1
USP6NL-202ENST00000379237 WIPF1O43516 503 aa8.2□□□□□ -1.1
USP6NL-202ENST00000379237 NDUFC2O95298 119 aa8.2□□□□□ -1.1
USP6NL-202ENST00000379237 POLR2KP53803 58 aaKnown RBP8.2□□□□□ -1.1
USP6NL-202ENST00000379237 C1orf195Q5TG92 126 aa8.2□□□□□ -1.1
USP6NL-202ENST00000379237 ANKHD1Q8IWZ3 2542 aaKnown RBP8.2□□□□□ -1.1
USP6NL-202ENST00000379237 TRAV13-2A0A0B4J235 113 aa8.19□□□□□ -1.1
USP6NL-202ENST00000379237 PSMB8P28062 276 aa8.19□□□□□ -1.1
USP6NL-202ENST00000379237 SNRPD3P62318 126 aaKnown RBP8.19□□□□□ -1.1
USP6NL-202ENST00000379237 FAM110DQ8TAY7 271 aaPredicted RBP8.19□□□□□ -1.1
USP6NL-202ENST00000379237 SMCR5Q8TEV8 140 aa8.19□□□□□ -1.1
USP6NL-202ENST00000379237 PIEZO2Q9H5I5 2752 aa8.19□□□□□ -1.1
USP6NL-202ENST00000379237 LY6EQ16553 131 aa8.19□□□□□ -1.1
USP6NL-202ENST00000379237 UBE2L6O14933 153 aa8.19□□□□□ -1.1
USP6NL-202ENST00000379237 LY6HO94772 140 aa8.19□□□□□ -1.1
USP6NL-202ENST00000379237 RPL36AP83881 106 aaKnown RBP8.19□□□□□ -1.1
USP6NL-202ENST00000379237 GPHB5Q86YW7 130 aa8.19□□□□□ -1.1
USP6NL-202ENST00000379237 RPL36ALQ969Q0 106 aaKnown RBP8.19□□□□□ -1.1
USP6NL-202ENST00000379237 PF4P02776 101 aa8.18□□□□□ -1.1
USP6NL-202ENST00000379237 KAAG1Q9UBP8 84 aa8.18□□□□□ -1.1
USP6NL-202ENST00000379237 LECT2O14960 151 aa8.18□□□□□ -1.1
USP6NL-202ENST00000379237 PRB1P04280 392 aa8.18□□□□□ -1.1
USP6NL-202ENST00000379237 VSIG2Q96IQ7 327 aa8.18□□□□□ -1.1
USP6NL-202ENST00000379237 RHPN1-AS1Q9BWJ2 59 aa8.18□□□□□ -1.1
USP6NL-202ENST00000379237 WFDC9Q8NEX5 89 aa8.18□□□□□ -1.1
USP6NL-202ENST00000379237 LINC00308Q8TCZ7 52 aa8.18□□□□□ -1.1
USP6NL-202ENST00000379237 FAM19A4Q96LR4 140 aa8.18□□□□□ -1.1
USP6NL-202ENST00000379237 A0A0J9YX75 114 aa8.17□□□□□ -1.1
USP6NL-202ENST00000379237 ZFAND2AQ8N6M9 145 aa8.17□□□□□ -1.1
USP6NL-202ENST00000379237 IGF2RP11717 2491 aa8.17□□□□□ -1.1
USP6NL-202ENST00000379237 FAM223AQ8IWN6 122 aa8.17□□□□□ -1.1
USP6NL-202ENST00000379237 MPLKIPQ8TAP9 179 aa8.17□□□□□ -1.1
USP6NL-202ENST00000379237 IGHV3OR16-12A0A075B7B8 117 aa8.17□□□□□ -1.1
USP6NL-202ENST00000379237 TRBV27A0A0K0K1C4 114 aa8.17□□□□□ -1.1
USP6NL-202ENST00000379237 MED14OSP0DP75 135 aa8.17□□□□□ -1.1
USP6NL-202ENST00000379237 SEC61GP60059 68 aa8.17□□□□□ -1.1
USP6NL-202ENST00000379237 SPINK13Q1W4C9 94 aa8.17□□□□□ -1.1
USP6NL-202ENST00000379237 RNASE3P12724 160 aaKnown RBP8.16□□□□□ -1.1
USP6NL-202ENST00000379237 ABCA2Q9BZC7 2435 aa8.16□□□□□ -1.1
USP6NL-202ENST00000379237 NCR3O14931 201 aa8.16□□□□□ -1.1
USP6NL-202ENST00000379237 IGHV4OR15-8A0A075B7B6 117 aa8.16□□□□□ -1.1
USP6NL-202ENST00000379237 A0A087WW49 117 aa8.16□□□□□ -1.1
USP6NL-202ENST00000379237 IGHV7-81A0A0B4J1V7 117 aa8.16□□□□□ -1.1
USP6NL-202ENST00000379237 ENHOQ6UWT2 76 aa8.16□□□□□ -1.1
USP6NL-202ENST00000379237 CDKN2A-AS1Q9UH64 79 aa8.16□□□□□ -1.1
USP6NL-202ENST00000379237 ZNF672Q499Z4 452 aaPredicted RBP8.15□□□□□ -1.1
USP6NL-202ENST00000379237 NPBQ8NG41 125 aa8.15□□□□□ -1.1
USP6NL-202ENST00000379237 C20orf173Q96LM9 149 aa8.15□□□□□ -1.1
USP6NL-202ENST00000379237 FRYQ5TBA9 3013 aa8.15□□□□□ -1.1
USP6NL-202ENST00000379237 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.15□□□□□ -1.1
USP6NL-202ENST00000379237 LAMTOR3Q9UHA4 124 aa8.15□□□□□ -1.1
USP6NL-202ENST00000379237 HIST2H2BCQ6DN03 193 aa8.15□□□□□ -1.11
USP6NL-202ENST00000379237 HIST2H2BDQ6DRA6 164 aa8.15□□□□□ -1.11
USP6NL-202ENST00000379237 MYO9AB2RTY4 2548 aa8.14□□□□□ -1.11
USP6NL-202ENST00000379237 IGHV3-16A0A0C4DH30 117 aa8.14□□□□□ -1.11
USP6NL-202ENST00000379237 EIF4EBP3O60516 100 aaPredicted RBP8.14□□□□□ -1.11
USP6NL-202ENST00000379237 Q6JHZ5 121 aa8.14□□□□□ -1.11
USP6NL-202ENST00000379237 SNURFQ9Y675 71 aa8.14□□□□□ -1.11
USP6NL-202ENST00000379237 IGHV1OR15-1A0A075B7D0 117 aa8.14□□□□□ -1.11
USP6NL-202ENST00000379237 CLPSL1A2RUU4 121 aa8.14□□□□□ -1.11
USP6NL-202ENST00000379237 ORMDL1Q9P0S3 153 aa8.14□□□□□ -1.11
USP6NL-202ENST00000379237 PIK3CD-AS1Q5SR53 167 aa8.14□□□□□ -1.11
USP6NL-202ENST00000379237 SND1-IT1Q9HBX3 110 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms