RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 UFSP1Q6NVU6 142 aa15.04■□□□□ -0
RNF38-205ENST00000377877 IGHV4-28A0A0C4DH34 117 aa15.03■□□□□ -0
RNF38-205ENST00000377877 A8MWV9 139 aa15.03■□□□□ -0
RNF38-205ENST00000377877 F5H697 171 aa15.03■□□□□ -0
RNF38-205ENST00000377877 SBSPONQ8IVN8 264 aa15.03■□□□□ -0
RNF38-205ENST00000377877 TENM3Q9P273 2699 aa15.03■□□□□ -0
RNF38-205ENST00000377877 GAGE12BA1L429 117 aa15.02■□□□□ -0
RNF38-205ENST00000377877 RS1O15537 224 aa15.02■□□□□ -0
RNF38-205ENST00000377877 GAGE7O76087 117 aa15.02■□□□□ -0
RNF38-205ENST00000377877 GAGE12FP0CL80 117 aa15.02■□□□□ -0
RNF38-205ENST00000377877 GAGE12GP0CL81 117 aa15.02■□□□□ -0
RNF38-205ENST00000377877 GAGE12IP0CL82 117 aa15.02■□□□□ -0
RNF38-205ENST00000377877 GTF2H5Q6ZYL4 71 aa15.02■□□□□ -0
RNF38-205ENST00000377877 Q8NAQ8 132 aa15.02■□□□□ -0
RNF38-205ENST00000377877 HHLA3Q9XRX5 114 aa15.02■□□□□ -0
RNF38-205ENST00000377877 SUMO4Q6EEV6 95 aa15.02□□□□□ -0.01
RNF38-205ENST00000377877 Q6ZSN1 163 aa15.02□□□□□ -0.01
RNF38-205ENST00000377877 CST9LQ9H4G1 147 aa15.01□□□□□ -0.01
RNF38-205ENST00000377877 GAGE10A6NGK3 116 aa15□□□□□ -0.01
RNF38-205ENST00000377877 RPL39LQ96EH5 51 aaKnown RBP15□□□□□ -0.01
RNF38-205ENST00000377877 ZNF56Q15929 161 aa15□□□□□ -0.01
RNF38-205ENST00000377877 ZNF479Q96JC4 524 aa15□□□□□ -0.01
RNF38-205ENST00000377877 SMIM2Q9BVW6 85 aa15□□□□□ -0.01
RNF38-205ENST00000377877 IGHV3-53P01767 116 aa14.99□□□□□ -0.01
RNF38-205ENST00000377877 MIFP14174 115 aa14.99□□□□□ -0.01
RNF38-205ENST00000377877 IGKV2D-26A0A0A0MRZ7 120 aa14.98□□□□□ -0.01
RNF38-205ENST00000377877 MRAPQ8TCY5 172 aa14.98□□□□□ -0.01
RNF38-205ENST00000377877 TP53TG1Q9Y2A0 90 aa14.98□□□□□ -0.01
RNF38-205ENST00000377877 Q9UF83 564 aa14.98□□□□□ -0.01
RNF38-205ENST00000377877 A0A087WX48 190 aa14.97□□□□□ -0.01
RNF38-205ENST00000377877 M0QY20 66 aa14.97□□□□□ -0.01
RNF38-205ENST00000377877 DEFB130BP0DP73 79 aa14.97□□□□□ -0.01
RNF38-205ENST00000377877 DEFB130AP0DP74 79 aa14.97□□□□□ -0.01
RNF38-205ENST00000377877 OCIAD2Q56VL3 154 aa14.97□□□□□ -0.01
RNF38-205ENST00000377877 ZC2HC1BQ5TFG8 222 aa14.97□□□□□ -0.01
RNF38-205ENST00000377877 FAM222AQ5U5X8 452 aa14.97□□□□□ -0.01
RNF38-205ENST00000377877 TRGV2A0A075B6R0 118 aa14.96□□□□□ -0.01
RNF38-205ENST00000377877 H3BUT2 72 aa14.96□□□□□ -0.01
RNF38-205ENST00000377877 K7EMI3 77 aa14.96□□□□□ -0.01
RNF38-205ENST00000377877 K7EP34 96 aa14.96□□□□□ -0.01
RNF38-205ENST00000377877 PLNP26678 52 aa14.96□□□□□ -0.01
RNF38-205ENST00000377877 ORMDL2Q53FV1 153 aa14.96□□□□□ -0.01
RNF38-205ENST00000377877 C20orf78Q9BR46 151 aa14.96□□□□□ -0.01
RNF38-205ENST00000377877 CHAC1Q9BUX1 264 aa14.96□□□□□ -0.01
RNF38-205ENST00000377877 P0DMU3 169 aa14.96□□□□□ -0.01
RNF38-205ENST00000377877 FAM231AP0DMU4 169 aa14.96□□□□□ -0.01
RNF38-205ENST00000377877 FAM231CP0DMU5 169 aa14.96□□□□□ -0.01
RNF38-205ENST00000377877 LINC00612Q8N6U2 182 aa14.96□□□□□ -0.01
RNF38-205ENST00000377877 MRPL35Q9NZE8 188 aaKnown RBP14.96□□□□□ -0.01
RNF38-205ENST00000377877 TRAV4A0A0B4J268 109 aa14.95□□□□□ -0.02
RNF38-205ENST00000377877 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.95□□□□□ -0.02
RNF38-205ENST00000377877 PCP4P48539 62 aa14.95□□□□□ -0.02
RNF38-205ENST00000377877 CELA1Q9UNI1 258 aa14.95□□□□□ -0.02
RNF38-205ENST00000377877 TRAV12-1A0A0B4J245 112 aa14.94□□□□□ -0.02
RNF38-205ENST00000377877 SMIM13P0DJ93 91 aa14.94□□□□□ -0.02
RNF38-205ENST00000377877 ZFP2Q6ZN57 461 aa14.94□□□□□ -0.02
RNF38-205ENST00000377877 GCSHP23434 173 aa14.93□□□□□ -0.02
RNF38-205ENST00000377877 SUMO2P61956 95 aaKnown RBP14.93□□□□□ -0.02
RNF38-205ENST00000377877 RNF151Q2KHN1 245 aa14.93□□□□□ -0.02
RNF38-205ENST00000377877 TRBV25-1A0A075B6N4 114 aa14.93□□□□□ -0.02
RNF38-205ENST00000377877 RHODO00212 210 aa14.93□□□□□ -0.02
RNF38-205ENST00000377877 PPP1R17O96001 155 aa14.93□□□□□ -0.02
RNF38-205ENST00000377877 OR5A1Q8NGJ0 315 aa14.93□□□□□ -0.02
RNF38-205ENST00000377877 A0A1W2PPM0 123 aa14.92□□□□□ -0.02
RNF38-205ENST00000377877 LYRM9A8MSI8 78 aa14.92□□□□□ -0.02
RNF38-205ENST00000377877 H7C1H1 209 aa14.92□□□□□ -0.02
RNF38-205ENST00000377877 K7ERU9 68 aa14.92□□□□□ -0.02
RNF38-205ENST00000377877 RAB37Q96AX2 223 aa14.92□□□□□ -0.02
RNF38-205ENST00000377877 TOMM6Q96B49 74 aa14.91□□□□□ -0.02
RNF38-205ENST00000377877 F8VRH5 84 aa14.91□□□□□ -0.02
RNF38-205ENST00000377877 TAL2Q16559 108 aa14.91□□□□□ -0.02
RNF38-205ENST00000377877 HUWE1Q7Z6Z7 4374 aaKnown RBP14.9□□□□□ -0.02
RNF38-205ENST00000377877 SCGB3A1Q96QR1 104 aa14.9□□□□□ -0.02
RNF38-205ENST00000377877 TM2D3Q9BRN9 247 aa14.9□□□□□ -0.02
RNF38-205ENST00000377877 TTTY13Q9BZ97 58 aa14.9□□□□□ -0.02
RNF38-205ENST00000377877 FABP2P12104 132 aa14.89□□□□□ -0.03
RNF38-205ENST00000377877 FXYD2P54710 66 aa14.89□□□□□ -0.03
RNF38-205ENST00000377877 FHL2Q14192 279 aa14.89□□□□□ -0.03
RNF38-205ENST00000377877 DEFB104AQ8WTQ1 72 aa14.89□□□□□ -0.03
RNF38-205ENST00000377877 TM2D2Q9BX73 214 aa14.89□□□□□ -0.03
RNF38-205ENST00000377877 NEGR1Q7Z3B1 354 aa14.89□□□□□ -0.03
RNF38-205ENST00000377877 CEND1Q8N111 149 aa14.89□□□□□ -0.03
RNF38-205ENST00000377877 EDA2RQ9HAV5 297 aa14.89□□□□□ -0.03
RNF38-205ENST00000377877 SPCS1Q9Y6A9 102 aa14.89□□□□□ -0.03
RNF38-205ENST00000377877 SPART-AS1P0CW21 52 aa14.88□□□□□ -0.03
RNF38-205ENST00000377877 NAA38Q9BRA0 125 aaKnown RBP14.88□□□□□ -0.03
RNF38-205ENST00000377877 CHTOPQ9Y3Y2 248 aaKnown RBP14.88□□□□□ -0.03
RNF38-205ENST00000377877 POLR2KP53803 58 aaKnown RBP14.87□□□□□ -0.03
RNF38-205ENST00000377877 SLC25A29Q8N8R3 303 aa14.87□□□□□ -0.03
RNF38-205ENST00000377877 VPS25Q9BRG1 176 aa14.87□□□□□ -0.03
RNF38-205ENST00000377877 TRBV6-5A0A0K0K1A5 114 aa14.87□□□□□ -0.03
RNF38-205ENST00000377877 SPATA25Q9BR10 227 aa14.87□□□□□ -0.03
RNF38-205ENST00000377877 DNAH9Q9NYC9 4486 aa14.87□□□□□ -0.03
RNF38-205ENST00000377877 DAD1P61803 113 aa14.86□□□□□ -0.03
RNF38-205ENST00000377877 C21orf62-AS1Q17RA5 79 aa14.86□□□□□ -0.03
RNF38-205ENST00000377877 NEXN-AS1Q8NBZ9 246 aa14.86□□□□□ -0.03
RNF38-205ENST00000377877 COL7A1Q02388 2944 aa14.86□□□□□ -0.03
RNF38-205ENST00000377877 TRGV4A0A0C4DH28 118 aa14.85□□□□□ -0.03
RNF38-205ENST00000377877 SDHAF1A6NFY7 115 aa14.85□□□□□ -0.03
RNF38-205ENST00000377877 A0A0J9YWU9 116 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms