RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 GAGE12FP0CL80 117 aa16.88■□□□□ 0.29
FOXA2-201ENST00000377115 GAGE12GP0CL81 117 aa16.88■□□□□ 0.29
FOXA2-201ENST00000377115 GAGE12IP0CL82 117 aa16.88■□□□□ 0.29
FOXA2-201ENST00000377115 GAGE4Q13068 117 aa16.88■□□□□ 0.29
FOXA2-201ENST00000377115 HTN1P15515 57 aa16.88■□□□□ 0.29
FOXA2-201ENST00000377115 C10orf99Q6UWK7 81 aa16.88■□□□□ 0.29
FOXA2-201ENST00000377115 Q9UF83 564 aa16.88■□□□□ 0.29
FOXA2-201ENST00000377115 VSIG2Q96IQ7 327 aa16.87■□□□□ 0.29
FOXA2-201ENST00000377115 K7EQG2 157 aa16.86■□□□□ 0.29
FOXA2-201ENST00000377115 RBMY1A1P0DJD3 496 aaKnown RBP16.86■□□□□ 0.29
FOXA2-201ENST00000377115 RBMY1CP0DJD4 496 aa16.86■□□□□ 0.29
FOXA2-201ENST00000377115 RBMY1FQ15415 496 aaKnown RBP16.86■□□□□ 0.29
FOXA2-201ENST00000377115 COX6CP09669 75 aa16.85■□□□□ 0.29
FOXA2-201ENST00000377115 NBL1P41271 181 aa16.85■□□□□ 0.29
FOXA2-201ENST00000377115 DAND5Q8N907 189 aa16.85■□□□□ 0.29
FOXA2-201ENST00000377115 DUX3Q96PT4 197 aa16.85■□□□□ 0.29
FOXA2-201ENST00000377115 H3BT86 120 aa16.85■□□□□ 0.29
FOXA2-201ENST00000377115 TMEM61Q8N0U2 210 aa16.84■□□□□ 0.29
FOXA2-201ENST00000377115 KNCNA6PVL3 124 aa16.84■□□□□ 0.29
FOXA2-201ENST00000377115 TRGV11A0A075B6L2 103 aa16.83■□□□□ 0.28
FOXA2-201ENST00000377115 C19orf84I3L1E1 186 aa16.83■□□□□ 0.28
FOXA2-201ENST00000377115 LST1O00453 97 aa16.83■□□□□ 0.28
FOXA2-201ENST00000377115 PRM2P04554 102 aa16.83■□□□□ 0.28
FOXA2-201ENST00000377115 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.82■□□□□ 0.28
FOXA2-201ENST00000377115 IGKV2-29A2NJV5 120 aaPredicted RBP16.82■□□□□ 0.28
FOXA2-201ENST00000377115 PSMB8P28062 276 aa16.82■□□□□ 0.28
FOXA2-201ENST00000377115 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.82■□□□□ 0.284e-7■■■□□ 17.9
FOXA2-201ENST00000377115 TINCRA0A1B0GVN0 87 aa16.81■□□□□ 0.28
FOXA2-201ENST00000377115 TNFRSF18Q9Y5U5 241 aa16.81■□□□□ 0.28
FOXA2-201ENST00000377115 DUX5Q96PT3 197 aa16.8■□□□□ 0.28
FOXA2-201ENST00000377115 CHCHD7Q9BUK0 85 aa16.8■□□□□ 0.28
FOXA2-201ENST00000377115 UBE2D4Q9Y2X8 147 aa16.8■□□□□ 0.28
FOXA2-201ENST00000377115 Q6ZSN1 163 aa16.8■□□□□ 0.28
FOXA2-201ENST00000377115 SYNJ2BPP57105 145 aa16.79■□□□□ 0.28
FOXA2-201ENST00000377115 NACAE9PAV3 2078 aa16.79■□□□□ 0.28
FOXA2-201ENST00000377115 EDA2RQ9HAV5 297 aa16.78■□□□□ 0.28
FOXA2-201ENST00000377115 PIMREGQ9BSJ6 248 aa16.78■□□□□ 0.28
FOXA2-201ENST00000377115 LINC00467Q9BRT7 94 aa16.77■□□□□ 0.27
FOXA2-201ENST00000377115 CELSR2Q9HCU4 2923 aa16.76■□□□□ 0.27
FOXA2-201ENST00000377115 IGHV3-38A0A0C4DH36 116 aa16.76■□□□□ 0.27
FOXA2-201ENST00000377115 YAE1D1Q9NRH1 226 aa16.76■□□□□ 0.27
FOXA2-201ENST00000377115 CDKN2A-AS1Q9UH64 79 aa16.76■□□□□ 0.27
FOXA2-201ENST00000377115 CSPG4Q6UVK1 2322 aa16.75■□□□□ 0.27
FOXA2-201ENST00000377115 DEFB121Q5J5C9 76 aa16.75■□□□□ 0.27
FOXA2-201ENST00000377115 SPANXA1Q9NS26 97 aa16.75■□□□□ 0.27
FOXA2-201ENST00000377115 FAM240AA0A1B0GVK7 77 aa16.75■□□□□ 0.27
FOXA2-201ENST00000377115 AVPP01185 164 aa16.75■□□□□ 0.27
FOXA2-201ENST00000377115 MRPL23Q16540 153 aaKnown RBP16.74■□□□□ 0.27
FOXA2-201ENST00000377115 CITED2Q99967 270 aaPredicted RBP16.74■□□□□ 0.27
FOXA2-201ENST00000377115 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.73■□□□□ 0.27
FOXA2-201ENST00000377115 CHCHD5Q9BSY4 110 aa16.73■□□□□ 0.27
FOXA2-201ENST00000377115 C10orf105Q8TEF2 133 aa16.72■□□□□ 0.27
FOXA2-201ENST00000377115 CREBBPQ92793 2442 aa16.72■□□□□ 0.27
FOXA2-201ENST00000377115 TIMM17BO60830 172 aa16.72■□□□□ 0.27
FOXA2-201ENST00000377115 RNF152Q8N8N0 203 aa16.71■□□□□ 0.27
FOXA2-201ENST00000377115 IGHV4-30-2A0A087WSY4 118 aa16.71■□□□□ 0.27
FOXA2-201ENST00000377115 TMEM101Q96IK0 257 aa16.71■□□□□ 0.27
FOXA2-201ENST00000377115 A0A0U1RRA0 63 aa16.7■□□□□ 0.26
FOXA2-201ENST00000377115 IGHV4-59P01825 116 aa16.7■□□□□ 0.26
FOXA2-201ENST00000377115 NDUFA1O15239 70 aa16.7■□□□□ 0.26
FOXA2-201ENST00000377115 ZNF625Q96I27 306 aaPredicted RBP16.7■□□□□ 0.26
FOXA2-201ENST00000377115 MSMBP08118 114 aa16.69■□□□□ 0.26
FOXA2-201ENST00000377115 MEIG1Q5JSS6 88 aa16.69■□□□□ 0.26
FOXA2-201ENST00000377115 SMIM20Q8N5G0 67 aa16.69■□□□□ 0.26
FOXA2-201ENST00000377115 SPG11Q96JI7 2443 aa16.69■□□□□ 0.26
FOXA2-201ENST00000377115 UCNP55089 124 aa16.69■□□□□ 0.26
FOXA2-201ENST00000377115 COX6A2Q02221 97 aa16.69■□□□□ 0.26
FOXA2-201ENST00000377115 TRBV7-7A0A0K0K1E9 115 aa16.68■□□□□ 0.26
FOXA2-201ENST00000377115 RBMY1BA6NDE4 496 aaKnown RBP16.68■□□□□ 0.26
FOXA2-201ENST00000377115 RBMY1EA6NEQ0 496 aaKnown RBP16.68■□□□□ 0.26
FOXA2-201ENST00000377115 RBMY1DP0C7P1 496 aaKnown RBP16.68■□□□□ 0.26
FOXA2-201ENST00000377115 LINC00308Q8TCZ7 52 aa16.68■□□□□ 0.26
FOXA2-201ENST00000377115 DEFB131AP59861 70 aa16.67■□□□□ 0.26
FOXA2-201ENST00000377115 LY6DQ14210 128 aa16.67■□□□□ 0.26
FOXA2-201ENST00000377115 Q9H8V8 135 aa16.67■□□□□ 0.26
FOXA2-201ENST00000377115 HOXD3P31249 432 aaPredicted RBP16.66■□□□□ 0.26
FOXA2-201ENST00000377115 CSMD2Q7Z408 3487 aa16.66■□□□□ 0.26
FOXA2-201ENST00000377115 C3orf56Q8N813 242 aa16.65■□□□□ 0.26
FOXA2-201ENST00000377115 CCL19Q99731 98 aa16.65■□□□□ 0.26
FOXA2-201ENST00000377115 IGLV5-45A0A087WSX0 123 aa16.65■□□□□ 0.26
FOXA2-201ENST00000377115 Q8N2B8 174 aa16.65■□□□□ 0.26
FOXA2-201ENST00000377115 CIRBPQ14011 172 aaKnown RBP16.64■□□□□ 0.25
FOXA2-201ENST00000377115 TIRAPP58753 221 aa16.64■□□□□ 0.25
FOXA2-201ENST00000377115 DEFB112Q30KQ8 113 aa16.64■□□□□ 0.25
FOXA2-201ENST00000377115 COX7A2LO14548 114 aa16.63■□□□□ 0.25
FOXA2-201ENST00000377115 ZNF415Q09FC8 603 aa16.63■□□□□ 0.25
FOXA2-201ENST00000377115 SOSTDC1Q6X4U4 206 aa16.63■□□□□ 0.25
FOXA2-201ENST00000377115 IGHV3OR16-12A0A075B7B8 117 aa16.62■□□□□ 0.25
FOXA2-201ENST00000377115 SMCR5Q8TEV8 140 aa16.62■□□□□ 0.25
FOXA2-201ENST00000377115 ATP5J2P56134 94 aa16.62■□□□□ 0.25
FOXA2-201ENST00000377115 IGHV3-53P01767 116 aa16.61■□□□□ 0.25
FOXA2-201ENST00000377115 DGAT2L7PQ6IED9 249 aa16.61■□□□□ 0.25
FOXA2-201ENST00000377115 FAM110AQ9BQ89 295 aa16.61■□□□□ 0.25
FOXA2-201ENST00000377115 FAM236AA0A1B0GUQ0 79 aa16.61■□□□□ 0.25
FOXA2-201ENST00000377115 FAM236BA0A1B0GV22 79 aa16.61■□□□□ 0.25
FOXA2-201ENST00000377115 HERV-K104P63124 156 aa16.61■□□□□ 0.25
FOXA2-201ENST00000377115 NDUFA7O95182 113 aa16.6■□□□□ 0.25
FOXA2-201ENST00000377115 IGLV5-39A0A0G2JS06 123 aa16.6■□□□□ 0.25
FOXA2-201ENST00000377115 LINC00242Q5T6M2 205 aa16.6■□□□□ 0.25
FOXA2-201ENST00000377115 C11orf72Q8NBR9 251 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms