RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 LST1O00453 97 aa12.09□□□□□ -0.47
TRIM39-201ENST00000376656 VSIG2Q96IQ7 327 aa12.09□□□□□ -0.47
TRIM39-201ENST00000376656 Q9UF83 564 aa12.09□□□□□ -0.47
TRIM39-201ENST00000376656 TMEM61Q8N0U2 210 aa12.09□□□□□ -0.47
TRIM39-201ENST00000376656 DAND5Q8N907 189 aa12.09□□□□□ -0.47
TRIM39-201ENST00000376656 HTN1P15515 57 aa12.08□□□□□ -0.48
TRIM39-201ENST00000376656 HIVEP3Q5T1R4 2406 aa12.08□□□□□ -0.48
TRIM39-201ENST00000376656 SNRPD3P62318 126 aaKnown RBP12.08□□□□□ -0.48
TRIM39-201ENST00000376656 IGF2RP11717 2491 aa12.06□□□□□ -0.48
TRIM39-201ENST00000376656 K7EQG2 157 aa12.06□□□□□ -0.48
TRIM39-201ENST00000376656 CFHR3Q02985 330 aa12.06□□□□□ -0.48
TRIM39-201ENST00000376656 RBMY1A1P0DJD3 496 aaKnown RBP12.06□□□□□ -0.48
TRIM39-201ENST00000376656 RBMY1CP0DJD4 496 aa12.06□□□□□ -0.48
TRIM39-201ENST00000376656 RBMY1FQ15415 496 aaKnown RBP12.06□□□□□ -0.48
TRIM39-201ENST00000376656 SMIM20Q8N5G0 67 aa12.06□□□□□ -0.48
TRIM39-201ENST00000376656 TRGV11A0A075B6L2 103 aa12.06□□□□□ -0.48
TRIM39-201ENST00000376656 TINCRA0A1B0GVN0 87 aa12.06□□□□□ -0.48
TRIM39-201ENST00000376656 KNCNA6PVL3 124 aa12.06□□□□□ -0.48
TRIM39-201ENST00000376656 KLRB1Q12918 225 aa12.06□□□□□ -0.48
TRIM39-201ENST00000376656 MRPL23Q16540 153 aaKnown RBP12.06□□□□□ -0.48
TRIM39-201ENST00000376656 DEFB121Q5J5C9 76 aa12.06□□□□□ -0.48
TRIM39-201ENST00000376656 C10orf99Q6UWK7 81 aa12.06□□□□□ -0.48
TRIM39-201ENST00000376656 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.05□□□□□ -0.48
TRIM39-201ENST00000376656 IGKV2-29A2NJV5 120 aaPredicted RBP12.05□□□□□ -0.48
TRIM39-201ENST00000376656 HERV-K104P63124 156 aa12.05□□□□□ -0.48
TRIM39-201ENST00000376656 CHCHD5Q9BSY4 110 aa12.05□□□□□ -0.48
TRIM39-201ENST00000376656 MUC6Q6W4X9 2439 aa12.05□□□□□ -0.48
TRIM39-201ENST00000376656 IGHV4-61A0A0C4DH41 118 aa12.05□□□□□ -0.48
TRIM39-201ENST00000376656 PRM2P04554 102 aa12.05□□□□□ -0.48
TRIM39-201ENST00000376656 TNFRSF18Q9Y5U5 241 aa12.04□□□□□ -0.48
TRIM39-201ENST00000376656 FAM240AA0A1B0GVK7 77 aa12.04□□□□□ -0.48
TRIM39-201ENST00000376656 MEIG1Q5JSS6 88 aa12.04□□□□□ -0.48
TRIM39-201ENST00000376656 CHCHD7Q9BUK0 85 aa12.04□□□□□ -0.48
TRIM39-201ENST00000376656 UBE2D4Q9Y2X8 147 aa12.04□□□□□ -0.48
TRIM39-201ENST00000376656 Q6ZSN1 163 aa12.03□□□□□ -0.48
TRIM39-201ENST00000376656 YAE1D1Q9NRH1 226 aa12.03□□□□□ -0.48
TRIM39-201ENST00000376656 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.03□□□□□ -0.489e-7■■■■■ 39.9
TRIM39-201ENST00000376656 NACAE9PAV3 2078 aa12.03□□□□□ -0.48
TRIM39-201ENST00000376656 CRYBG3Q68DQ2 2970 aa12.03□□□□□ -0.48
TRIM39-201ENST00000376656 MAP1AP78559 2803 aaPredicted RBP12.03□□□□□ -0.48
TRIM39-201ENST00000376656 CITED2Q99967 270 aaPredicted RBP12.03□□□□□ -0.48
TRIM39-201ENST00000376656 EDA2RQ9HAV5 297 aa12.02□□□□□ -0.49
TRIM39-201ENST00000376656 C3orf56Q8N813 242 aa12.01□□□□□ -0.49
TRIM39-201ENST00000376656 LINC00467Q9BRT7 94 aa12.01□□□□□ -0.49
TRIM39-201ENST00000376656 CDKN2A-AS1Q9UH64 79 aa12.01□□□□□ -0.49
TRIM39-201ENST00000376656 PSMB8P28062 276 aa12.01□□□□□ -0.49
TRIM39-201ENST00000376656 DUX5Q96PT3 197 aa12.01□□□□□ -0.49
TRIM39-201ENST00000376656 IGHV3-38A0A0C4DH36 116 aa12.01□□□□□ -0.49
TRIM39-201ENST00000376656 FAM110AQ9BQ89 295 aa12.01□□□□□ -0.49
TRIM39-201ENST00000376656 SPANXA1Q9NS26 97 aa12.01□□□□□ -0.49
TRIM39-201ENST00000376656 TRBV7-7A0A0K0K1E9 115 aa12□□□□□ -0.49
TRIM39-201ENST00000376656 TIMM17BO60830 172 aa12□□□□□ -0.49
TRIM39-201ENST00000376656 SYNJ2BPP57105 145 aa12□□□□□ -0.49
TRIM39-201ENST00000376656 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12□□□□□ -0.49
TRIM39-201ENST00000376656 A0A0U1RRA0 63 aa11.99□□□□□ -0.49
TRIM39-201ENST00000376656 C19orf84I3L1E1 186 aa11.99□□□□□ -0.49
TRIM39-201ENST00000376656 TMEM101Q96IK0 257 aa11.99□□□□□ -0.49
TRIM39-201ENST00000376656 ZNF625Q96I27 306 aaPredicted RBP11.98□□□□□ -0.49
TRIM39-201ENST00000376656 NDUFA1O15239 70 aa11.98□□□□□ -0.49
TRIM39-201ENST00000376656 LINC00308Q8TCZ7 52 aa11.97□□□□□ -0.49
TRIM39-201ENST00000376656 CSPG4Q6UVK1 2322 aa11.97□□□□□ -0.49
TRIM39-201ENST00000376656 COX6A2Q02221 97 aa11.96□□□□□ -0.49
TRIM39-201ENST00000376656 NBL1P41271 181 aa11.96□□□□□ -0.49
TRIM39-201ENST00000376656 RNF152Q8N8N0 203 aa11.96□□□□□ -0.49
TRIM39-201ENST00000376656 FAM236AA0A1B0GUQ0 79 aa11.96□□□□□ -0.5
TRIM39-201ENST00000376656 FAM236BA0A1B0GV22 79 aa11.96□□□□□ -0.5
TRIM39-201ENST00000376656 SMCR5Q8TEV8 140 aa11.96□□□□□ -0.5
TRIM39-201ENST00000376656 PIMREGQ9BSJ6 248 aa11.96□□□□□ -0.5
TRIM39-201ENST00000376656 CREBBPQ92793 2442 aa11.95□□□□□ -0.5
TRIM39-201ENST00000376656 AVPP01185 164 aa11.95□□□□□ -0.5
TRIM39-201ENST00000376656 Q8N2B8 174 aa11.95□□□□□ -0.5
TRIM39-201ENST00000376656 LINC01587Q99440 93 aa11.95□□□□□ -0.5
TRIM39-201ENST00000376656 Q9H8V8 135 aa11.95□□□□□ -0.5
TRIM39-201ENST00000376656 COX7A2LO14548 114 aa11.94□□□□□ -0.5
TRIM39-201ENST00000376656 CIRBPQ14011 172 aaKnown RBP11.94□□□□□ -0.5
TRIM39-201ENST00000376656 SOSTDC1Q6X4U4 206 aa11.94□□□□□ -0.5
TRIM39-201ENST00000376656 IGLV5-45A0A087WSX0 123 aa11.93□□□□□ -0.5
TRIM39-201ENST00000376656 RBMY1BA6NDE4 496 aaKnown RBP11.93□□□□□ -0.5
TRIM39-201ENST00000376656 RBMY1EA6NEQ0 496 aaKnown RBP11.93□□□□□ -0.5
TRIM39-201ENST00000376656 RBMY1DP0C7P1 496 aaKnown RBP11.93□□□□□ -0.5
TRIM39-201ENST00000376656 TIRAPP58753 221 aa11.93□□□□□ -0.5
TRIM39-201ENST00000376656 IGHV4-59P01825 116 aa11.92□□□□□ -0.5
TRIM39-201ENST00000376656 DEFB131AP59861 70 aa11.92□□□□□ -0.5
TRIM39-201ENST00000376656 C10orf105Q8TEF2 133 aa11.92□□□□□ -0.5
TRIM39-201ENST00000376656 IGHV3OR16-12A0A075B7B8 117 aa11.92□□□□□ -0.5
TRIM39-201ENST00000376656 ACYP1P07311 99 aa11.91□□□□□ -0.5
TRIM39-201ENST00000376656 IGHV4-30-2A0A087WSY4 118 aa11.91□□□□□ -0.5
TRIM39-201ENST00000376656 CELSR2Q9HCU4 2923 aa11.91□□□□□ -0.5
TRIM39-201ENST00000376656 DAZ2Q13117 558 aaKnown RBP11.91□□□□□ -0.5
TRIM39-201ENST00000376656 DGAT2L7PQ6IED9 249 aa11.91□□□□□ -0.5
TRIM39-201ENST00000376656 DAZ4Q86SG3 579 aaKnown RBP11.91□□□□□ -0.5
TRIM39-201ENST00000376656 DAZ3Q9NR90 486 aaKnown RBP11.91□□□□□ -0.5
TRIM39-201ENST00000376656 SPG11Q96JI7 2443 aa11.91□□□□□ -0.5
TRIM39-201ENST00000376656 MSMBP08118 114 aa11.9□□□□□ -0.5
TRIM39-201ENST00000376656 HOXD3P31249 432 aaPredicted RBP11.9□□□□□ -0.5
TRIM39-201ENST00000376656 IGLV5-39A0A0G2JS06 123 aa11.9□□□□□ -0.5
TRIM39-201ENST00000376656 NDUFA7O95182 113 aa11.9□□□□□ -0.5
TRIM39-201ENST00000376656 ZNF415Q09FC8 603 aa11.9□□□□□ -0.5
TRIM39-201ENST00000376656 IGHV3-53P01767 116 aa11.89□□□□□ -0.51
TRIM39-201ENST00000376656 LINC00242Q5T6M2 205 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms