RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 SPATA25Q9BR10 227 aa13.53□□□□□ -0.24
COL16A1-203ENST00000373672 IGKV2-24A0A0C4DH68 120 aa13.53□□□□□ -0.24
COL16A1-203ENST00000373672 C19orf84I3L1E1 186 aa13.53□□□□□ -0.24
COL16A1-203ENST00000373672 PLA2G5P39877 138 aa13.53□□□□□ -0.24
COL16A1-203ENST00000373672 CRIP3Q6Q6R5 217 aa13.53□□□□□ -0.24
COL16A1-203ENST00000373672 IGLV4-3A0A075B6K6 122 aa13.52□□□□□ -0.24
COL16A1-203ENST00000373672 ZNF22P17026 224 aaPredicted RBP13.52□□□□□ -0.24
COL16A1-203ENST00000373672 SPANXB1Q9NS25 103 aaPredicted RBP13.52□□□□□ -0.24
COL16A1-203ENST00000373672 CDKN2A-AS1Q9UH64 79 aa13.52□□□□□ -0.25
COL16A1-203ENST00000373672 ZGRF1Q86YA3 2104 aa13.52□□□□□ -0.25
COL16A1-203ENST00000373672 EBI3Q14213 229 aa13.51□□□□□ -0.25
COL16A1-203ENST00000373672 ZFAND3Q9H8U3 227 aa13.51□□□□□ -0.25
COL16A1-203ENST00000373672 LY6LH3BQJ8 138 aa13.51□□□□□ -0.25
COL16A1-203ENST00000373672 CHD3Q12873 2000 aaKnown RBP13.5□□□□□ -0.25
COL16A1-203ENST00000373672 TRAV23DV6A0A075B6W5 121 aa13.5□□□□□ -0.25
COL16A1-203ENST00000373672 SEC61GP60059 68 aa13.5□□□□□ -0.25
COL16A1-203ENST00000373672 CFAP126Q5VTH2 177 aa13.5□□□□□ -0.25
COL16A1-203ENST00000373672 U3KQK5 164 aa13.5□□□□□ -0.25
COL16A1-203ENST00000373672 IBA57-AS1B1ANH7 110 aa13.5□□□□□ -0.25
COL16A1-203ENST00000373672 NBASA2RRP1 2371 aa13.5□□□□□ -0.25
COL16A1-203ENST00000373672 DYSFO75923 2080 aa13.5□□□□□ -0.25
COL16A1-203ENST00000373672 NOTCH3Q9UM47 2321 aa13.49□□□□□ -0.25
COL16A1-203ENST00000373672 HIGD2AQ9BW72 106 aa13.49□□□□□ -0.25
COL16A1-203ENST00000373672 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.49□□□□□ -0.252e-6■■■■□ 19.7
COL16A1-203ENST00000373672 CRYGDP07320 174 aa13.49□□□□□ -0.25
COL16A1-203ENST00000373672 LINC00308Q8TCZ7 52 aa13.48□□□□□ -0.25
COL16A1-203ENST00000373672 M0QY20 66 aa13.48□□□□□ -0.25
COL16A1-203ENST00000373672 PCNX1Q96RV3 2341 aa13.48□□□□□ -0.25
COL16A1-203ENST00000373672 IGKV4-1P06312 121 aa13.47□□□□□ -0.25
COL16A1-203ENST00000373672 NACAE9PAV3 2078 aa13.47□□□□□ -0.25
COL16A1-203ENST00000373672 SHANK1Q9Y566 2161 aa13.47□□□□□ -0.25
COL16A1-203ENST00000373672 TEX49A0A1B0GTD5 131 aa13.47□□□□□ -0.25
COL16A1-203ENST00000373672 RNF183Q96D59 192 aa13.47□□□□□ -0.25
COL16A1-203ENST00000373672 CRIP1P50238 77 aa13.46□□□□□ -0.25
COL16A1-203ENST00000373672 HILS1P60008 231 aa13.46□□□□□ -0.25
COL16A1-203ENST00000373672 ATP5EP2Q5VTU8 51 aa13.46□□□□□ -0.25
COL16A1-203ENST00000373672 RNF185Q96GF1 192 aa13.46□□□□□ -0.25
COL16A1-203ENST00000373672 FAM19A1Q7Z5A9 133 aa13.46□□□□□ -0.26
COL16A1-203ENST00000373672 CREBBPQ92793 2442 aa13.46□□□□□ -0.26
COL16A1-203ENST00000373672 DENND4AQ7Z401 1863 aa13.46□□□□□ -0.26
COL16A1-203ENST00000373672 TMEM131Q92545 1883 aa13.45□□□□□ -0.26
COL16A1-203ENST00000373672 TRBV6-8A0A0A6YYG3 113 aa13.45□□□□□ -0.26
COL16A1-203ENST00000373672 TRBV6-4A0A1B0GX49 114 aa13.45□□□□□ -0.26
COL16A1-203ENST00000373672 DEFB131BA0A096LNP1 70 aa13.45□□□□□ -0.26
COL16A1-203ENST00000373672 C22orf34Q6ZV56 151 aa13.45□□□□□ -0.26
COL16A1-203ENST00000373672 SDIM1Q6ZPB5 146 aa13.44□□□□□ -0.26
COL16A1-203ENST00000373672 KIR2DL5BQ8NHK3 375 aa13.44□□□□□ -0.26
COL16A1-203ENST00000373672 NDUFV3P56181 108 aaKnown RBP13.44□□□□□ -0.26
COL16A1-203ENST00000373672 MIFP14174 115 aa13.43□□□□□ -0.26
COL16A1-203ENST00000373672 TRBV30A0A0K0K1B3 111 aa13.43□□□□□ -0.26
COL16A1-203ENST00000373672 C2orf16Q68DN1 1984 aa13.43□□□□□ -0.26
COL16A1-203ENST00000373672 MAPKAPK5-AS1Q8N8E1 139 aa13.43□□□□□ -0.26
COL16A1-203ENST00000373672 MT-ATP8P03928 68 aa13.42□□□□□ -0.26
COL16A1-203ENST00000373672 TRIAP1O43715 76 aa13.42□□□□□ -0.26
COL16A1-203ENST00000373672 SLPIP03973 132 aa13.42□□□□□ -0.26
COL16A1-203ENST00000373672 C11orf71Q6IPW1 123 aa13.42□□□□□ -0.26
COL16A1-203ENST00000373672 PYGO1Q9Y3Y4 419 aa13.42□□□□□ -0.26
COL16A1-203ENST00000373672 PIK3CD-AS1Q5SR53 167 aa13.42□□□□□ -0.26
COL16A1-203ENST00000373672 Q6ZSV7 163 aa13.42□□□□□ -0.26
COL16A1-203ENST00000373672 ZNF106Q9H2Y7 1883 aaKnown RBP13.41□□□□□ -0.26
COL16A1-203ENST00000373672 UQCRQO14949 82 aa13.41□□□□□ -0.26
COL16A1-203ENST00000373672 ADAMTS9Q9P2N4 1935 aa13.41□□□□□ -0.26
COL16A1-203ENST00000373672 TRBV6-5A0A0K0K1A5 114 aa13.4□□□□□ -0.26
COL16A1-203ENST00000373672 TRBV27A0A0K0K1C4 114 aa13.4□□□□□ -0.26
COL16A1-203ENST00000373672 KIAA1549LQ6ZVL6 1849 aa13.4□□□□□ -0.26
COL16A1-203ENST00000373672 IGLV2-11P01706 119 aa13.4□□□□□ -0.26
COL16A1-203ENST00000373672 LTBP2Q14767 1821 aa13.39□□□□□ -0.27
COL16A1-203ENST00000373672 A0A087WZ39 114 aa13.39□□□□□ -0.27
COL16A1-203ENST00000373672 TP73-AS1Q9UF72 201 aa13.39□□□□□ -0.27
COL16A1-203ENST00000373672 ENHOQ6UWT2 76 aa13.39□□□□□ -0.27
COL16A1-203ENST00000373672 YPEL4Q96NS1 127 aa13.39□□□□□ -0.27
COL16A1-203ENST00000373672 C20orf197Q8N268 126 aa13.39□□□□□ -0.27
COL16A1-203ENST00000373672 PROK1P58294 105 aa13.38□□□□□ -0.27
COL16A1-203ENST00000373672 PCNX2A6NKB5 2137 aa13.38□□□□□ -0.27
COL16A1-203ENST00000373672 BRK1Q8WUW1 75 aa13.38□□□□□ -0.27
COL16A1-203ENST00000373672 TIMM17BO60830 172 aa13.38□□□□□ -0.27
COL16A1-203ENST00000373672 FAM19A5Q7Z5A7 132 aaPredicted RBP13.37□□□□□ -0.27
COL16A1-203ENST00000373672 SCXQ7RTU7 201 aa13.37□□□□□ -0.27
COL16A1-203ENST00000373672 LINC00482Q8N8I6 264 aa13.37□□□□□ -0.27
COL16A1-203ENST00000373672 FAM236DA0A1B0GTK5 79 aa13.37□□□□□ -0.27
COL16A1-203ENST00000373672 FAM236CP0DP71 79 aa13.37□□□□□ -0.27
COL16A1-203ENST00000373672 PSMG3-AS1Q96PY0 264 aa13.37□□□□□ -0.27
COL16A1-203ENST00000373672 A0A096LNI7 61 aa13.36□□□□□ -0.27
COL16A1-203ENST00000373672 INAFM1C9JVW0 142 aa13.36□□□□□ -0.27
COL16A1-203ENST00000373672 USP17L23D6RBM5 183 aa13.36□□□□□ -0.27
COL16A1-203ENST00000373672 CASC2Q6XLA1 102 aa13.36□□□□□ -0.27
COL16A1-203ENST00000373672 TSHBP01222 138 aa13.36□□□□□ -0.27
COL16A1-203ENST00000373672 SYCNQ0VAF6 134 aa13.36□□□□□ -0.27
COL16A1-203ENST00000373672 C10orf99Q6UWK7 81 aa13.36□□□□□ -0.27
COL16A1-203ENST00000373672 XAGE1AQ9HD64 81 aa13.36□□□□□ -0.27
COL16A1-203ENST00000373672 Q8N6K4 173 aa13.35□□□□□ -0.27
COL16A1-203ENST00000373672 ZNF702PQ9H963 129 aa13.35□□□□□ -0.27
COL16A1-203ENST00000373672 C6orf99Q4VX62 202 aa13.35□□□□□ -0.27
COL16A1-203ENST00000373672 NRACQ8N912 160 aa13.34□□□□□ -0.27
COL16A1-203ENST00000373672 C3orf22Q8N5N4 141 aa13.34□□□□□ -0.27
COL16A1-203ENST00000373672 SHISA2Q6UWI4 295 aa13.34□□□□□ -0.27
COL16A1-203ENST00000373672 Q8N976 141 aa13.34□□□□□ -0.27
COL16A1-203ENST00000373672 BBC3Q96PG8 261 aaPredicted RBP13.34□□□□□ -0.27
COL16A1-203ENST00000373672 RNASE3P12724 160 aaKnown RBP13.33□□□□□ -0.27
COL16A1-203ENST00000373672 SVIPQ8NHG7 77 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms