RNA–Protein interactions for RNA: ENST00000373489.9

PBX3-204, Transcript of PBX homeobox 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX3, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-204ENST00000373489 SMCR5Q8TEV8 140 aa11.84□□□□□ -0.51
PBX3-204ENST00000373489 SIRPDQ9H106 197 aa11.84□□□□□ -0.51
PBX3-204ENST00000373489 TRBV6-5A0A0K0K1A5 114 aa11.83□□□□□ -0.52
PBX3-204ENST00000373489 IGHV3-73A0A0B4J1V6 119 aa11.83□□□□□ -0.52
PBX3-204ENST00000373489 A0A0U1RRA0 63 aa11.83□□□□□ -0.52
PBX3-204ENST00000373489 IGHV3OR16-10A0A075B7F0 116 aa11.82□□□□□ -0.52
PBX3-204ENST00000373489 KLK9Q9UKQ9 250 aa11.82□□□□□ -0.52
PBX3-204ENST00000373489 TRAV41A0A0B4J266 112 aa11.82□□□□□ -0.52
PBX3-204ENST00000373489 RHOHQ15669 191 aa11.82□□□□□ -0.52
PBX3-204ENST00000373489 MIAQ16674 131 aa11.82□□□□□ -0.52
PBX3-204ENST00000373489 APRG1Q8IVJ8 170 aa11.82□□□□□ -0.52
PBX3-204ENST00000373489 TMEM61Q8N0U2 210 aa11.82□□□□□ -0.52
PBX3-204ENST00000373489 RHPN1-AS1Q9BWJ2 59 aa11.81□□□□□ -0.52
PBX3-204ENST00000373489 COL12A1Q99715 3063 aa11.81□□□□□ -0.52
PBX3-204ENST00000373489 DEFB121Q5J5C9 76 aa11.81□□□□□ -0.52
PBX3-204ENST00000373489 SPTAN1Q13813 2472 aaKnown RBP11.8□□□□□ -0.52
PBX3-204ENST00000373489 KLLNB2CW77 178 aa11.8□□□□□ -0.52
PBX3-204ENST00000373489 EPG5Q9HCE0 2579 aa11.8□□□□□ -0.52
PBX3-204ENST00000373489 IGHV1-58A0A0C4DH39 117 aa11.8□□□□□ -0.52
PBX3-204ENST00000373489 C3orf22Q8N5N4 141 aa11.8□□□□□ -0.52
PBX3-204ENST00000373489 HERVK_113P63121 156 aa11.79□□□□□ -0.52
PBX3-204ENST00000373489 NDUFA7O95182 113 aa11.79□□□□□ -0.52
PBX3-204ENST00000373489 ATP5J2P56134 94 aa11.79□□□□□ -0.52
PBX3-204ENST00000373489 ZNF843Q8N446 348 aa11.79□□□□□ -0.52
PBX3-204ENST00000373489 C5orf56Q8N8D9 126 aa11.79□□□□□ -0.52
PBX3-204ENST00000373489 SPANXDQ9BXN6 97 aa11.79□□□□□ -0.52
PBX3-204ENST00000373489 SPANXCQ9NY87 97 aa11.79□□□□□ -0.52
PBX3-204ENST00000373489 KLK9Q2XQG4 91 aa11.79□□□□□ -0.52
PBX3-204ENST00000373489 ZNF625Q96I27 306 aaPredicted RBP11.79□□□□□ -0.52
PBX3-204ENST00000373489 IGHV3-16A0A0C4DH30 117 aa11.78□□□□□ -0.52
PBX3-204ENST00000373489 NPFFO15130 113 aa11.78□□□□□ -0.52
PBX3-204ENST00000373489 PROK1P58294 105 aa11.78□□□□□ -0.52
PBX3-204ENST00000373489 FAM104AQ969W3 186 aa11.78□□□□□ -0.52
PBX3-204ENST00000373489 CSDC2Q9Y534 153 aaKnown RBP11.78□□□□□ -0.52
PBX3-204ENST00000373489 NDUFA4O00483 81 aa11.78□□□□□ -0.52
PBX3-204ENST00000373489 HTN1P15515 57 aa11.78□□□□□ -0.52
PBX3-204ENST00000373489 NRGNQ92686 78 aa11.78□□□□□ -0.52
PBX3-204ENST00000373489 FLNCQ14315 2725 aa11.77□□□□□ -0.52
PBX3-204ENST00000373489 VSIG2Q96IQ7 327 aa11.77□□□□□ -0.53
PBX3-204ENST00000373489 CITED2Q99967 270 aaPredicted RBP11.77□□□□□ -0.53
PBX3-204ENST00000373489 MRPS36P82909 103 aaKnown RBP11.76□□□□□ -0.53
PBX3-204ENST00000373489 DNAJC30Q96LL9 226 aa11.76□□□□□ -0.53
PBX3-204ENST00000373489 Q9UF83 564 aa11.76□□□□□ -0.53
PBX3-204ENST00000373489 ZNF462Q96JM2 2506 aa11.76□□□□□ -0.53
PBX3-204ENST00000373489 FAM223BA6NKX1 122 aa11.75□□□□□ -0.53
PBX3-204ENST00000373489 FAM223AQ8IWN6 122 aa11.75□□□□□ -0.53
PBX3-204ENST00000373489 C9orf85Q96MD7 179 aa11.75□□□□□ -0.53
PBX3-204ENST00000373489 BPESC1Q9GZL8 116 aa11.75□□□□□ -0.53
PBX3-204ENST00000373489 RS1O15537 224 aa11.75□□□□□ -0.53
PBX3-204ENST00000373489 LMO4P61968 165 aa11.75□□□□□ -0.53
PBX3-204ENST00000373489 DCANP1Q8TF63 244 aa11.75□□□□□ -0.53
PBX3-204ENST00000373489 MYO18BQ8IUG5 2567 aa11.75□□□□□ -0.53
PBX3-204ENST00000373489 PF4V1P10720 104 aa11.74□□□□□ -0.53
PBX3-204ENST00000373489 DAZ2Q13117 558 aaKnown RBP11.74□□□□□ -0.53
PBX3-204ENST00000373489 DAZ4Q86SG3 579 aaKnown RBP11.74□□□□□ -0.53
PBX3-204ENST00000373489 DAZ1Q9NQZ3 744 aaKnown RBP11.74□□□□□ -0.53
PBX3-204ENST00000373489 DAZ3Q9NR90 486 aaKnown RBP11.74□□□□□ -0.53
PBX3-204ENST00000373489 UQCRQO14949 82 aa11.74□□□□□ -0.53
PBX3-204ENST00000373489 SPINK13Q1W4C9 94 aa11.74□□□□□ -0.53
PBX3-204ENST00000373489 EDA2RQ9HAV5 297 aa11.74□□□□□ -0.53
PBX3-204ENST00000373489 LINC00643Q86TS7 51 aa11.73□□□□□ -0.53
PBX3-204ENST00000373489 IMUPQ9GZP8 106 aa11.73□□□□□ -0.53
PBX3-204ENST00000373489 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.73□□□□□ -0.53
PBX3-204ENST00000373489 IGKV2-29A2NJV5 120 aaPredicted RBP11.73□□□□□ -0.53
PBX3-204ENST00000373489 KNCNA6PVL3 124 aa11.73□□□□□ -0.53
PBX3-204ENST00000373489 Q8N2B8 174 aa11.73□□□□□ -0.53
PBX3-204ENST00000373489 USP9XQ93008 2570 aaPredicted RBP11.73□□□□□ -0.53
PBX3-204ENST00000373489 NACAE9PAV3 2078 aa11.73□□□□□ -0.53
PBX3-204ENST00000373489 ACYP1P07311 99 aa11.72□□□□□ -0.53
PBX3-204ENST00000373489 LY6EQ16553 131 aa11.72□□□□□ -0.53
PBX3-204ENST00000373489 DOPEY1Q5JWR5 2465 aa11.72□□□□□ -0.53
PBX3-204ENST00000373489 FAM19A5Q7Z5A7 132 aaPredicted RBP11.72□□□□□ -0.53
PBX3-204ENST00000373489 LINC00526Q96FQ7 95 aa11.72□□□□□ -0.53
PBX3-204ENST00000373489 CDKN2A-AS1Q9UH64 79 aa11.71□□□□□ -0.53
PBX3-204ENST00000373489 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.71□□□□□ -0.531e-5■■■■□ 21.5
PBX3-204ENST00000373489 IGHG2P01859 326 aa11.71□□□□□ -0.54
PBX3-204ENST00000373489 PRM2P04554 102 aa11.71□□□□□ -0.54
PBX3-204ENST00000373489 BAALC-AS2P0C853 105 aa11.71□□□□□ -0.54
PBX3-204ENST00000373489 GAGE2AQ6NT46 116 aa11.71□□□□□ -0.54
PBX3-204ENST00000373489 BRD3OSQ6XYD6 125 aa11.7□□□□□ -0.54
PBX3-204ENST00000373489 IGHV1OR15-1A0A075B7D0 117 aa11.7□□□□□ -0.54
PBX3-204ENST00000373489 IGHV3-38A0A0C4DH36 116 aa11.7□□□□□ -0.54
PBX3-204ENST00000373489 MOB4Q9Y3A3 225 aa11.69□□□□□ -0.54
PBX3-204ENST00000373489 VPS13CQ709C8 3753 aa11.69□□□□□ -0.54
PBX3-204ENST00000373489 CREBBPQ92793 2442 aa11.69□□□□□ -0.54
PBX3-204ENST00000373489 DOPEY2Q9Y3R5 2298 aa11.69□□□□□ -0.54
PBX3-204ENST00000373489 hADV29S1A0JD25 119 aa11.69□□□□□ -0.54
PBX3-204ENST00000373489 COX7A2LO14548 114 aa11.69□□□□□ -0.54
PBX3-204ENST00000373489 TIRAPP58753 221 aa11.69□□□□□ -0.54
PBX3-204ENST00000373489 PYGO1Q9Y3Y4 419 aa11.69□□□□□ -0.54
PBX3-204ENST00000373489 TINCRA0A1B0GVN0 87 aa11.68□□□□□ -0.54
PBX3-204ENST00000373489 C19orf54Q5BKX5 351 aa11.68□□□□□ -0.54
PBX3-204ENST00000373489 LINC00308Q8TCZ7 52 aa11.68□□□□□ -0.54
PBX3-204ENST00000373489 CYSTM1Q9H1C7 97 aa11.68□□□□□ -0.54
PBX3-204ENST00000373489 Q9HAA7 133 aa11.68□□□□□ -0.54
PBX3-204ENST00000373489 UTP20O75691 2785 aaKnown RBP11.68□□□□□ -0.54
PBX3-204ENST00000373489 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.67□□□□□ -0.54
PBX3-204ENST00000373489 CCL19Q99731 98 aa11.67□□□□□ -0.54
PBX3-204ENST00000373489 Q9H8V8 135 aa11.67□□□□□ -0.54
PBX3-204ENST00000373489 MAP1AP78559 2803 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms