RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 EDN2P20800 178 aa13.77□□□□□ -0.21
PRDM1-202ENST00000369091 TIRAPP58753 221 aa13.77□□□□□ -0.21
PRDM1-202ENST00000369091 TMEM219Q86XT9 240 aa13.77□□□□□ -0.21
PRDM1-202ENST00000369091 C22orf24Q9Y442 160 aa13.77□□□□□ -0.21
PRDM1-202ENST00000369091 IGHV3-16A0A0C4DH30 117 aa13.76□□□□□ -0.21
PRDM1-202ENST00000369091 IGKV3-20P01619 116 aa13.76□□□□□ -0.21
PRDM1-202ENST00000369091 ZFP36P26651 326 aaKnown RBP13.76□□□□□ -0.21
PRDM1-202ENST00000369091 COX7A2LO14548 114 aa13.76□□□□□ -0.21
PRDM1-202ENST00000369091 ATP5G1P05496 136 aa13.76□□□□□ -0.21
PRDM1-202ENST00000369091 SDIM1Q6ZPB5 146 aa13.76□□□□□ -0.21
PRDM1-202ENST00000369091 MINOS1-NBL1R4GNA1 71 aa13.76□□□□□ -0.21
PRDM1-202ENST00000369091 IGHV3-73A0A0B4J1V6 119 aa13.75□□□□□ -0.21
PRDM1-202ENST00000369091 TRAV13-1A0A0B4J241 112 aa13.75□□□□□ -0.21
PRDM1-202ENST00000369091 IGHV3-11P01762 117 aa13.75□□□□□ -0.21
PRDM1-202ENST00000369091 C9orf85Q96MD7 179 aa13.75□□□□□ -0.21
PRDM1-202ENST00000369091 BAALC-AS2P0C853 105 aa13.74□□□□□ -0.21
PRDM1-202ENST00000369091 OR13C6PQ8NH95 151 aa13.74□□□□□ -0.21
PRDM1-202ENST00000369091 ZNF625Q96I27 306 aaPredicted RBP13.74□□□□□ -0.21
PRDM1-202ENST00000369091 PEMTQ9UBM1 199 aa13.74□□□□□ -0.21
PRDM1-202ENST00000369091 OXTP01178 125 aa13.73□□□□□ -0.21
PRDM1-202ENST00000369091 CXCL5P42830 114 aa13.73□□□□□ -0.21
PRDM1-202ENST00000369091 CEP295Q9C0D2 2601 aa13.73□□□□□ -0.21
PRDM1-202ENST00000369091 NBL1P41271 181 aa13.73□□□□□ -0.21
PRDM1-202ENST00000369091 DEFB124Q8NES8 71 aa13.73□□□□□ -0.21
PRDM1-202ENST00000369091 FAM218AQ96MZ4 157 aa13.73□□□□□ -0.21
PRDM1-202ENST00000369091 PROK1P58294 105 aa13.72□□□□□ -0.21
PRDM1-202ENST00000369091 BEAN1Q3B7T3 259 aa13.72□□□□□ -0.21
PRDM1-202ENST00000369091 IGHG2P01859 326 aa13.72□□□□□ -0.21
PRDM1-202ENST00000369091 KLRB1Q12918 225 aa13.72□□□□□ -0.21
PRDM1-202ENST00000369091 TRACP01848 142 aa13.71□□□□□ -0.21
PRDM1-202ENST00000369091 GRNP28799 593 aaKnown RBP13.71□□□□□ -0.21
PRDM1-202ENST00000369091 HIST1H4AP62805 103 aaKnown RBP13.71□□□□□ -0.21
PRDM1-202ENST00000369091 DSCR8Q96T75 97 aa13.71□□□□□ -0.21
PRDM1-202ENST00000369091 RHPN1-AS1Q9BWJ2 59 aa13.71□□□□□ -0.21
PRDM1-202ENST00000369091 SAA4P35542 130 aa13.71□□□□□ -0.22
PRDM1-202ENST00000369091 LINC00308Q8TCZ7 52 aa13.71□□□□□ -0.22
PRDM1-202ENST00000369091 AKAP13Q12802 2813 aa13.7□□□□□ -0.22
PRDM1-202ENST00000369091 IGHV3OR16-10A0A075B7F0 116 aa13.7□□□□□ -0.22
PRDM1-202ENST00000369091 Q9HAA7 133 aa13.7□□□□□ -0.22
PRDM1-202ENST00000369091 Q9UF83 564 aa13.7□□□□□ -0.22
PRDM1-202ENST00000369091 TRAV25A0A0B4J276 109 aa13.7□□□□□ -0.22
PRDM1-202ENST00000369091 ATOX1O00244 68 aa13.7□□□□□ -0.22
PRDM1-202ENST00000369091 NDUFA4O00483 81 aa13.7□□□□□ -0.22
PRDM1-202ENST00000369091 RPS28P62857 69 aaKnown RBP13.7□□□□□ -0.22
PRDM1-202ENST00000369091 NCOR2Q9Y618 2525 aa13.69□□□□□ -0.22
PRDM1-202ENST00000369091 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.69□□□□□ -0.22
PRDM1-202ENST00000369091 TINCRA0A1B0GVN0 87 aa13.69□□□□□ -0.22
PRDM1-202ENST00000369091 IGKV2-29A2NJV5 120 aaPredicted RBP13.69□□□□□ -0.22
PRDM1-202ENST00000369091 C5orf56Q8N8D9 126 aa13.69□□□□□ -0.22
PRDM1-202ENST00000369091 PYGO1Q9Y3Y4 419 aa13.69□□□□□ -0.22
PRDM1-202ENST00000369091 IGKV3D-7A0A0C4DH55 119 aa13.69□□□□□ -0.22
PRDM1-202ENST00000369091 SOSTDC1Q6X4U4 206 aa13.69□□□□□ -0.22
PRDM1-202ENST00000369091 DPH3Q96FX2 82 aa13.69□□□□□ -0.22
PRDM1-202ENST00000369091 CDKN2A-AS1Q9UH64 79 aa13.69□□□□□ -0.22
PRDM1-202ENST00000369091 C4orf26Q17RF5 130 aa13.68□□□□□ -0.22
PRDM1-202ENST00000369091 TIMM17BO60830 172 aa13.68□□□□□ -0.22
PRDM1-202ENST00000369091 SIRPDQ9H106 197 aa13.68□□□□□ -0.22
PRDM1-202ENST00000369091 A0A087WVE0 104 aa13.67□□□□□ -0.22
PRDM1-202ENST00000369091 NACAE9PAV3 2078 aa13.67□□□□□ -0.22
PRDM1-202ENST00000369091 HOXD3P31249 432 aaPredicted RBP13.67□□□□□ -0.22
PRDM1-202ENST00000369091 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.67□□□□□ -0.22
PRDM1-202ENST00000369091 FAM223BA6NKX1 122 aa13.66□□□□□ -0.22
PRDM1-202ENST00000369091 FAM223AQ8IWN6 122 aa13.66□□□□□ -0.22
PRDM1-202ENST00000369091 WIPF1O43516 503 aa13.66□□□□□ -0.22
PRDM1-202ENST00000369091 NDUFA1O15239 70 aa13.65□□□□□ -0.22
PRDM1-202ENST00000369091 Q9H8V8 135 aa13.65□□□□□ -0.22
PRDM1-202ENST00000369091 CHD8Q9HCK8 2581 aa13.65□□□□□ -0.22
PRDM1-202ENST00000369091 ANKRD11Q6UB99 2663 aaPredicted RBP13.65□□□□□ -0.22
PRDM1-202ENST00000369091 RPL18AQ02543 176 aaKnown RBP13.65□□□□□ -0.22
PRDM1-202ENST00000369091 C9orf129Q5T035 196 aaKnown RBP13.65□□□□□ -0.22
PRDM1-202ENST00000369091 SPTBN1Q01082 2364 aaKnown RBP13.65□□□□□ -0.22
PRDM1-202ENST00000369091 HRCT1Q6UXD1 115 aa13.64□□□□□ -0.23
PRDM1-202ENST00000369091 RNF152Q8N8N0 203 aa13.64□□□□□ -0.23
PRDM1-202ENST00000369091 ANKHD1Q8IWZ3 2542 aaKnown RBP13.64□□□□□ -0.23
PRDM1-202ENST00000369091 HRNRQ86YZ3 2850 aaPredicted RBP13.64□□□□□ -0.23
PRDM1-202ENST00000369091 PF4V1P10720 104 aa13.64□□□□□ -0.23
PRDM1-202ENST00000369091 SPINK13Q1W4C9 94 aa13.64□□□□□ -0.23
PRDM1-202ENST00000369091 UBE2D4Q9Y2X8 147 aa13.64□□□□□ -0.23
PRDM1-202ENST00000369091 C19orf54Q5BKX5 351 aa13.63□□□□□ -0.23
PRDM1-202ENST00000369091 CHCHD7Q9BUK0 85 aa13.63□□□□□ -0.23
PRDM1-202ENST00000369091 IGHV1OR15-1A0A075B7D0 117 aa13.62□□□□□ -0.23
PRDM1-202ENST00000369091 KNCNA6PVL3 124 aa13.62□□□□□ -0.23
PRDM1-202ENST00000369091 CIRBPQ14011 172 aaKnown RBP13.62□□□□□ -0.23
PRDM1-202ENST00000369091 UPK3BQ9BT76 320 aa13.62□□□□□ -0.23
PRDM1-202ENST00000369091 IGHV3-38A0A0C4DH36 116 aa13.62□□□□□ -0.23
PRDM1-202ENST00000369091 HTN1P15515 57 aa13.62□□□□□ -0.23
PRDM1-202ENST00000369091 COX6A2Q02221 97 aa13.62□□□□□ -0.23
PRDM1-202ENST00000369091 LINC00467Q9BRT7 94 aa13.62□□□□□ -0.23
PRDM1-202ENST00000369091 INAFM2P0DMQ5 153 aa13.61□□□□□ -0.23
PRDM1-202ENST00000369091 TMEM258P61165 79 aa13.61□□□□□ -0.23
PRDM1-202ENST00000369091 ACACAQ13085 2346 aa13.61□□□□□ -0.23
PRDM1-202ENST00000369091 MALP21145 153 aa13.6□□□□□ -0.23
PRDM1-202ENST00000369091 C14orf132Q9NPU4 83 aa13.6□□□□□ -0.23
PRDM1-202ENST00000369091 PRIMA1Q86XR5 153 aa13.6□□□□□ -0.23
PRDM1-202ENST00000369091 Q5XG85 94 aa13.6□□□□□ -0.23
PRDM1-202ENST00000369091 CELSR1Q9NYQ6 3014 aa13.59□□□□□ -0.23
PRDM1-202ENST00000369091 PRM2P04554 102 aa13.59□□□□□ -0.23
PRDM1-202ENST00000369091 IGF2-ASQ6U949 168 aa13.59□□□□□ -0.23
PRDM1-202ENST00000369091 DNAL4O96015 105 aa13.59□□□□□ -0.23
PRDM1-202ENST00000369091 PIK3CD-AS1Q5SR53 167 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms