RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 K7ERJ3 54 aa7.43□□□□□ -1.22
TPM3-209ENST00000368527 HTN1P15515 57 aa7.43□□□□□ -1.22
TPM3-209ENST00000368527 DAZ2Q13117 558 aaKnown RBP7.43□□□□□ -1.22
TPM3-209ENST00000368527 ODF3L2Q3SX64 289 aa7.43□□□□□ -1.22
TPM3-209ENST00000368527 GAGE13Q4V321 117 aa7.43□□□□□ -1.22
TPM3-209ENST00000368527 DAZ4Q86SG3 579 aaKnown RBP7.43□□□□□ -1.22
TPM3-209ENST00000368527 WFDC11Q8NEX6 87 aa7.43□□□□□ -1.22
TPM3-209ENST00000368527 RNF183Q96D59 192 aa7.43□□□□□ -1.22
TPM3-209ENST00000368527 DAZ3Q9NR90 486 aaKnown RBP7.43□□□□□ -1.22
TPM3-209ENST00000368527 DOPEY2Q9Y3R5 2298 aa7.42□□□□□ -1.22
TPM3-209ENST00000368527 TRAV4A0A0B4J268 109 aa7.42□□□□□ -1.22
TPM3-209ENST00000368527 IGHV3-30P01768 117 aa7.42□□□□□ -1.22
TPM3-209ENST00000368527 IGHV3-30-5P0DP03 117 aa7.42□□□□□ -1.22
TPM3-209ENST00000368527 TIRAPP58753 221 aa7.42□□□□□ -1.22
TPM3-209ENST00000368527 RPL36AP83881 106 aaKnown RBP7.42□□□□□ -1.22
TPM3-209ENST00000368527 COPS9Q8WXC6 57 aa7.42□□□□□ -1.22
TPM3-209ENST00000368527 RPL36ALQ969Q0 106 aaKnown RBP7.42□□□□□ -1.22
TPM3-209ENST00000368527 YAE1D1Q9NRH1 226 aa7.42□□□□□ -1.22
TPM3-209ENST00000368527 PGPEP1Q9NXJ5 209 aa7.42□□□□□ -1.22
TPM3-209ENST00000368527 CSDC2Q9Y534 153 aaKnown RBP7.42□□□□□ -1.22
TPM3-209ENST00000368527 A0A0B4J2C4 111 aa7.41□□□□□ -1.22
TPM3-209ENST00000368527 IGHV1-58A0A0C4DH39 117 aa7.41□□□□□ -1.22
TPM3-209ENST00000368527 A0A0J9YXY3 114 aa7.41□□□□□ -1.22
TPM3-209ENST00000368527 H7C423 109 aa7.41□□□□□ -1.22
TPM3-209ENST00000368527 TIMM17BO60830 172 aa7.41□□□□□ -1.22
TPM3-209ENST00000368527 AZU1P20160 251 aa7.41□□□□□ -1.22
TPM3-209ENST00000368527 RNF151Q2KHN1 245 aa7.41□□□□□ -1.22
TPM3-209ENST00000368527 DGAT2L7PQ6IED9 249 aa7.41□□□□□ -1.22
TPM3-209ENST00000368527 FAM19A3Q7Z5A8 133 aa7.41□□□□□ -1.22
TPM3-209ENST00000368527 NDUFA11Q86Y39 141 aa7.41□□□□□ -1.22
TPM3-209ENST00000368527 ATP6V0E2Q8NHE4 81 aa7.41□□□□□ -1.22
TPM3-209ENST00000368527 C16orf74Q96GX8 76 aa7.41□□□□□ -1.22
TPM3-209ENST00000368527 NAA38Q9BRA0 125 aaKnown RBP7.41□□□□□ -1.22
TPM3-209ENST00000368527 CHCHD7Q9BUK0 85 aa7.41□□□□□ -1.22
TPM3-209ENST00000368527 PRO1854Q9UHT4 67 aa7.41□□□□□ -1.22
TPM3-209ENST00000368527 UBE2D4Q9Y2X8 147 aa7.41□□□□□ -1.22
TPM3-209ENST00000368527 A0A0J9YXV3 536 aa7.4□□□□□ -1.22
TPM3-209ENST00000368527 EMP1P54849 157 aa7.4□□□□□ -1.22
TPM3-209ENST00000368527 HILS1P60008 231 aa7.4□□□□□ -1.22
TPM3-209ENST00000368527 UBE2D3P61077 147 aa7.4□□□□□ -1.22
TPM3-209ENST00000368527 UBE2D2P62837 147 aa7.4□□□□□ -1.22
TPM3-209ENST00000368527 HERVK_113P63121 156 aa7.4□□□□□ -1.22
TPM3-209ENST00000368527 C1orf158Q8N1D5 194 aa7.4□□□□□ -1.22
TPM3-209ENST00000368527 C10orf126Q8N4M7 172 aa7.4□□□□□ -1.22
TPM3-209ENST00000368527 LINC01006Q8NI28 216 aa7.4□□□□□ -1.22
TPM3-209ENST00000368527 GEMIN7Q9H840 131 aaKnown RBP7.4□□□□□ -1.22
TPM3-209ENST00000368527 XCL2Q9UBD3 114 aa7.4□□□□□ -1.22
TPM3-209ENST00000368527 TEX15Q9BXT5 2789 aa7.4□□□□□ -1.23
TPM3-209ENST00000368527 IGLV5-45A0A087WSX0 123 aa7.39□□□□□ -1.23
TPM3-209ENST00000368527 IGHV3-73A0A0B4J1V6 119 aa7.39□□□□□ -1.23
TPM3-209ENST00000368527 K7EQD1 137 aa7.39□□□□□ -1.23
TPM3-209ENST00000368527 M0QXV9 152 aa7.39□□□□□ -1.23
TPM3-209ENST00000368527 IGLV1-51P01701 117 aa7.39□□□□□ -1.23
TPM3-209ENST00000368527 IGHV3-30-3P0DP02 117 aa7.39□□□□□ -1.23
TPM3-209ENST00000368527 IFITM1P13164 125 aa7.39□□□□□ -1.23
TPM3-209ENST00000368527 TSPEAR-AS2P59090 65 aa7.39□□□□□ -1.23
TPM3-209ENST00000368527 SPANXDQ9BXN6 97 aa7.39□□□□□ -1.23
TPM3-209ENST00000368527 GTSF1LQ9H1H1 148 aa7.39□□□□□ -1.23
TPM3-209ENST00000368527 ESM1Q9NQ30 184 aa7.39□□□□□ -1.23
TPM3-209ENST00000368527 SPANXCQ9NY87 97 aa7.39□□□□□ -1.23
TPM3-209ENST00000368527 TRGV1A0A0A0MS02 117 aa7.38□□□□□ -1.23
TPM3-209ENST00000368527 SAP30O75446 220 aa7.38□□□□□ -1.23
TPM3-209ENST00000368527 TSPAN13O95857 204 aa7.38□□□□□ -1.23
TPM3-209ENST00000368527 PCP4P48539 62 aa7.38□□□□□ -1.23
TPM3-209ENST00000368527 KRTAP1-1Q07627 177 aa7.38□□□□□ -1.23
TPM3-209ENST00000368527 VSIG2Q96IQ7 327 aa7.38□□□□□ -1.23
TPM3-209ENST00000368527 CITED2Q99967 270 aaPredicted RBP7.38□□□□□ -1.23
TPM3-209ENST00000368527 PPDPFQ9H3Y8 114 aa7.38□□□□□ -1.23
TPM3-209ENST00000368527 UNC79Q9P2D8 2635 aa7.38□□□□□ -1.23
TPM3-209ENST00000368527 TRBV6-4A0A1B0GX49 114 aa7.37□□□□□ -1.23
TPM3-209ENST00000368527 H3BMG7 143 aa7.37□□□□□ -1.23
TPM3-209ENST00000368527 APOMO95445 188 aa7.37□□□□□ -1.23
TPM3-209ENST00000368527 CIRBPQ14011 172 aaKnown RBP7.37□□□□□ -1.23
TPM3-209ENST00000368527 ZFAND6Q6FIF0 208 aa7.37□□□□□ -1.23
TPM3-209ENST00000368527 Q6ZSN1 163 aa7.37□□□□□ -1.23
TPM3-209ENST00000368527 OPRPNQ99935 248 aaPredicted RBP7.37□□□□□ -1.23
TPM3-209ENST00000368527 OVOL2Q9BRP0 275 aa7.37□□□□□ -1.23
TPM3-209ENST00000368527 NDUFA12Q9UI09 145 aa7.37□□□□□ -1.23
TPM3-209ENST00000368527 ERG28Q9UKR5 140 aa7.37□□□□□ -1.23
TPM3-209ENST00000368527 UTP20O75691 2785 aaKnown RBP7.37□□□□□ -1.23
TPM3-209ENST00000368527 LOC107984156A0A0G2JMH3 177 aa7.36□□□□□ -1.23
TPM3-209ENST00000368527 A0A1W2PRX2 142 aa7.36□□□□□ -1.23
TPM3-209ENST00000368527 CFC1BP0CG36 223 aa7.36□□□□□ -1.23
TPM3-209ENST00000368527 CFC1P0CG37 223 aa7.36□□□□□ -1.23
TPM3-209ENST00000368527 PROK1P58294 105 aa7.36□□□□□ -1.23
TPM3-209ENST00000368527 ARL17AQ8IVW1 177 aa7.36□□□□□ -1.23
TPM3-209ENST00000368527 TMEM101Q96IK0 257 aa7.36□□□□□ -1.23
TPM3-209ENST00000368527 INSL3P51460 131 aa7.35□□□□□ -1.23
TPM3-209ENST00000368527 MIAQ16674 131 aa7.35□□□□□ -1.23
TPM3-209ENST00000368527 Q6ZUT4 128 aa7.35□□□□□ -1.23
TPM3-209ENST00000368527 FAM104AQ969W3 186 aa7.35□□□□□ -1.23
TPM3-209ENST00000368527 PRO0461Q9UI25 63 aa7.35□□□□□ -1.23
TPM3-209ENST00000368527 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.34□□□□□ -1.23
TPM3-209ENST00000368527 TEX48A0A1B0GUV7 120 aa7.34□□□□□ -1.23
TPM3-209ENST00000368527 IGKV2-29A2NJV5 120 aaPredicted RBP7.34□□□□□ -1.23
TPM3-209ENST00000368527 A4D1N5 150 aa7.34□□□□□ -1.23
TPM3-209ENST00000368527 NDUFA1O15239 70 aa7.34□□□□□ -1.23
TPM3-209ENST00000368527 IGHV3-33P01772 117 aa7.34□□□□□ -1.23
TPM3-209ENST00000368527 SCGB1C2P0DMR2 95 aa7.34□□□□□ -1.23
TPM3-209ENST00000368527 HERV-K104P63124 156 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms