RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 DEFB131BA0A096LNP1 70 aa11.17□□□□□ -0.62
LMX1B-201ENST00000355497 CCKP06307 115 aa11.17□□□□□ -0.62
LMX1B-201ENST00000355497 ABCA4P78363 2273 aa11.16□□□□□ -0.62
LMX1B-201ENST00000355497 C1orf195Q5TG92 126 aa11.16□□□□□ -0.62
LMX1B-201ENST00000355497 C1orf158Q8N1D5 194 aa11.16□□□□□ -0.62
LMX1B-201ENST00000355497 C20orf173Q96LM9 149 aa11.16□□□□□ -0.62
LMX1B-201ENST00000355497 P0C879 139 aa11.15□□□□□ -0.62
LMX1B-201ENST00000355497 K7EQG2 157 aa11.15□□□□□ -0.62
LMX1B-201ENST00000355497 CFAP126Q5VTH2 177 aa11.15□□□□□ -0.62
LMX1B-201ENST00000355497 TIMM17BO60830 172 aa11.15□□□□□ -0.62
LMX1B-201ENST00000355497 DCANP1Q8TF63 244 aa11.15□□□□□ -0.62
LMX1B-201ENST00000355497 C9orf85Q96MD7 179 aa11.15□□□□□ -0.62
LMX1B-201ENST00000355497 C3orf84H3BNL1 204 aa11.14□□□□□ -0.63
LMX1B-201ENST00000355497 Q8N9L7 120 aa11.14□□□□□ -0.63
LMX1B-201ENST00000355497 UBE2D1P51668 147 aa11.14□□□□□ -0.63
LMX1B-201ENST00000355497 ABCA1O95477 2261 aa11.14□□□□□ -0.63
LMX1B-201ENST00000355497 TRBV6-8A0A0A6YYG3 113 aa11.14□□□□□ -0.63
LMX1B-201ENST00000355497 LINC01548A6NM66 108 aa11.14□□□□□ -0.63
LMX1B-201ENST00000355497 DEFB114Q30KQ6 69 aa11.14□□□□□ -0.63
LMX1B-201ENST00000355497 XAGE1AQ9HD64 81 aa11.14□□□□□ -0.63
LMX1B-201ENST00000355497 FRMPD3Q5JV73 1810 aa11.13□□□□□ -0.63
LMX1B-201ENST00000355497 C6orf99Q4VX62 202 aa11.13□□□□□ -0.63
LMX1B-201ENST00000355497 NDUFA7O95182 113 aa11.13□□□□□ -0.63
LMX1B-201ENST00000355497 HRCT1Q6UXD1 115 aa11.13□□□□□ -0.63
LMX1B-201ENST00000355497 WFDC13Q8IUB5 93 aa11.13□□□□□ -0.63
LMX1B-201ENST00000355497 NACAE9PAV3 2078 aa11.13□□□□□ -0.63
LMX1B-201ENST00000355497 MSMPQ1L6U9 139 aa11.13□□□□□ -0.63
LMX1B-201ENST00000355497 Q6YL49 198 aa11.13□□□□□ -0.63
LMX1B-201ENST00000355497 C7orf33Q8WU49 177 aa11.13□□□□□ -0.63
LMX1B-201ENST00000355497 IGF1P05019 195 aa11.13□□□□□ -0.63
LMX1B-201ENST00000355497 FBXL19-AS1Q494R0 122 aa11.13□□□□□ -0.63
LMX1B-201ENST00000355497 MAPKAPK5-AS1Q8N8E1 139 aa11.13□□□□□ -0.63
LMX1B-201ENST00000355497 TRBV27A0A0K0K1C4 114 aa11.12□□□□□ -0.63
LMX1B-201ENST00000355497 SYCNQ0VAF6 134 aa11.12□□□□□ -0.63
LMX1B-201ENST00000355497 ZNF407Q9C0G0 2248 aa11.12□□□□□ -0.63
LMX1B-201ENST00000355497 MRPS12O15235 138 aaKnown RBP11.12□□□□□ -0.63
LMX1B-201ENST00000355497 ZNF706Q9Y5V0 76 aaPredicted RBP11.12□□□□□ -0.63
LMX1B-201ENST00000355497 COL6A6A6NMZ7 2263 aa11.12□□□□□ -0.63
LMX1B-201ENST00000355497 IGHV4-30-4P0DP06 118 aa11.12□□□□□ -0.63
LMX1B-201ENST00000355497 IGHV4-31P0DP07 118 aa11.12□□□□□ -0.63
LMX1B-201ENST00000355497 M0QY20 66 aa11.11□□□□□ -0.63
LMX1B-201ENST00000355497 FAM19A3Q7Z5A8 133 aa11.11□□□□□ -0.63
LMX1B-201ENST00000355497 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.11□□□□□ -0.63
LMX1B-201ENST00000355497 SERP2Q8N6R1 65 aa11.11□□□□□ -0.63
LMX1B-201ENST00000355497 SPINK6Q6UWN8 80 aa11.11□□□□□ -0.63
LMX1B-201ENST00000355497 TRBV6-4A0A1B0GX49 114 aa11.11□□□□□ -0.63
LMX1B-201ENST00000355497 PRR4Q16378 134 aa11.11□□□□□ -0.63
LMX1B-201ENST00000355497 DHRS4-AS1Q9P1J3 65 aa11.11□□□□□ -0.63
LMX1B-201ENST00000355497 U3KQK5 164 aa11.11□□□□□ -0.63
LMX1B-201ENST00000355497 LRRC75A-AS1Q8N1F1 130 aa11.1□□□□□ -0.63
LMX1B-201ENST00000355497 LINC00574Q9H8X3 128 aa11.1□□□□□ -0.63
LMX1B-201ENST00000355497 CHD3Q12873 2000 aaKnown RBP11.1□□□□□ -0.63
LMX1B-201ENST00000355497 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.1□□□□□ -0.63
LMX1B-201ENST00000355497 PKDREJQ9NTG1 2253 aa11.1□□□□□ -0.63
LMX1B-201ENST00000355497 UBE2D4Q9Y2X8 147 aa11.1□□□□□ -0.63
LMX1B-201ENST00000355497 MIFP14174 115 aa11.1□□□□□ -0.63
LMX1B-201ENST00000355497 FAM30AQ9NZY2 134 aa11.1□□□□□ -0.63
LMX1B-201ENST00000355497 MGAMO43451 1857 aa11.09□□□□□ -0.63
LMX1B-201ENST00000355497 ZFAND3Q9H8U3 227 aa11.09□□□□□ -0.63
LMX1B-201ENST00000355497 TP73-AS1Q9UF72 201 aa11.09□□□□□ -0.63
LMX1B-201ENST00000355497 LMO4P61968 165 aa11.09□□□□□ -0.63
LMX1B-201ENST00000355497 IGKV2-28A0A075B6P5 120 aa11.09□□□□□ -0.63
LMX1B-201ENST00000355497 IGKV2D-28P01615 120 aa11.09□□□□□ -0.63
LMX1B-201ENST00000355497 TRBV6-5A0A0K0K1A5 114 aa11.08□□□□□ -0.64
LMX1B-201ENST00000355497 RNF185Q96GF1 192 aa11.08□□□□□ -0.64
LMX1B-201ENST00000355497 DIDO1Q9BTC0 2240 aaKnown RBP11.08□□□□□ -0.64
LMX1B-201ENST00000355497 M0R378 163 aa11.08□□□□□ -0.64
LMX1B-201ENST00000355497 PPDPFQ9H3Y8 114 aa11.08□□□□□ -0.64
LMX1B-201ENST00000355497 MBD6Q96DN6 1003 aa11.07□□□□□ -0.64
LMX1B-201ENST00000355497 IMUPQ9GZP8 106 aa11.07□□□□□ -0.64
LMX1B-201ENST00000355497 PYGO1Q9Y3Y4 419 aa11.07□□□□□ -0.64
LMX1B-201ENST00000355497 LY6LH3BQJ8 138 aa11.07□□□□□ -0.64
LMX1B-201ENST00000355497 TANC1Q9C0D5 1861 aa11.07□□□□□ -0.64
LMX1B-201ENST00000355497 GVINP1Q7Z2Y8 2422 aa11.07□□□□□ -0.64
LMX1B-201ENST00000355497 PLA2G5P39877 138 aa11.06□□□□□ -0.64
LMX1B-201ENST00000355497 SPTBN2O15020 2390 aa11.06□□□□□ -0.64
LMX1B-201ENST00000355497 PROK1P58294 105 aa11.06□□□□□ -0.64
LMX1B-201ENST00000355497 UBE2D3P61077 147 aa11.06□□□□□ -0.64
LMX1B-201ENST00000355497 BRWD1-AS2P59051 145 aa11.06□□□□□ -0.64
LMX1B-201ENST00000355497 Q6ZQY7 126 aa11.05□□□□□ -0.64
LMX1B-201ENST00000355497 CRIP1P50238 77 aa11.05□□□□□ -0.64
LMX1B-201ENST00000355497 CD164L2Q6UWJ8 174 aa11.05□□□□□ -0.64
LMX1B-201ENST00000355497 Q8N976 141 aa11.05□□□□□ -0.64
LMX1B-201ENST00000355497 ROS1P08922 2347 aa11.05□□□□□ -0.64
LMX1B-201ENST00000355497 DYSFO75923 2080 aa11.05□□□□□ -0.64
LMX1B-201ENST00000355497 NUP210Q8TEM1 1887 aaPredicted RBP11.05□□□□□ -0.64
LMX1B-201ENST00000355497 LINC00482Q8N8I6 264 aa11.04□□□□□ -0.64
LMX1B-201ENST00000355497 CACNA1BQ00975 2339 aa11.04□□□□□ -0.64
LMX1B-201ENST00000355497 TRAV10A0A0B4J240 114 aa11.04□□□□□ -0.64
LMX1B-201ENST00000355497 BBC3Q96PG8 261 aaPredicted RBP11.04□□□□□ -0.64
LMX1B-201ENST00000355497 MALRD1Q5VYJ5 2156 aa11.04□□□□□ -0.64
LMX1B-201ENST00000355497 NCOR1O75376 2440 aa11.04□□□□□ -0.64
LMX1B-201ENST00000355497 A8MZ25 164 aa11.03□□□□□ -0.64
LMX1B-201ENST00000355497 A0A1W2PNU3 283 aaPredicted RBP11.03□□□□□ -0.64
LMX1B-201ENST00000355497 TSHBP01222 138 aa11.03□□□□□ -0.64
LMX1B-201ENST00000355497 C1orf229Q6ZS94 237 aaPredicted RBP11.03□□□□□ -0.64
LMX1B-201ENST00000355497 Q8NA96 180 aa11.03□□□□□ -0.64
LMX1B-201ENST00000355497 LST1O00453 97 aa11.03□□□□□ -0.64
LMX1B-201ENST00000355497 IGLV4-69A0A075B6H9 119 aa11.03□□□□□ -0.64
LMX1B-201ENST00000355497 OBSL1O75147 1896 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms