RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SLC25A34Q6PIV7 304 aa16.02■□□□□ 0.15
PDLIM2-203ENST00000339162 PKD1L1Q8TDX9 2849 aa16.01■□□□□ 0.15
PDLIM2-203ENST00000339162 TRAV12-1A0A0B4J245 112 aa16.01■□□□□ 0.15
PDLIM2-203ENST00000339162 PRSS29PA6NIE9 313 aa16.01■□□□□ 0.15
PDLIM2-203ENST00000339162 C20orf203Q8NBC4 194 aa16.01■□□□□ 0.15
PDLIM2-203ENST00000339162 OVOL2Q9BRP0 275 aa16.01■□□□□ 0.15
PDLIM2-203ENST00000339162 CHTOPQ9Y3Y2 248 aaKnown RBP16.01■□□□□ 0.15
PDLIM2-203ENST00000339162 DEFB135Q30KP9 77 aa16■□□□□ 0.15
PDLIM2-203ENST00000339162 ZNRF2Q8NHG8 242 aa16■□□□□ 0.15
PDLIM2-203ENST00000339162 X6R8D5 127 aa16■□□□□ 0.15
PDLIM2-203ENST00000339162 F8VRH5 84 aa15.99■□□□□ 0.15
PDLIM2-203ENST00000339162 NMUP48645 174 aa15.99■□□□□ 0.15
PDLIM2-203ENST00000339162 SLC25A29Q8N8R3 303 aa15.99■□□□□ 0.15
PDLIM2-203ENST00000339162 COX8AP10176 69 aa15.99■□□□□ 0.15
PDLIM2-203ENST00000339162 WIPF1O43516 503 aa15.98■□□□□ 0.15
PDLIM2-203ENST00000339162 IGKV2D-26A0A0A0MRZ7 120 aa15.98■□□□□ 0.15
PDLIM2-203ENST00000339162 COL6A5A8TX70 2615 aa15.98■□□□□ 0.15
PDLIM2-203ENST00000339162 DNAJC30Q96LL9 226 aa15.98■□□□□ 0.15
PDLIM2-203ENST00000339162 TIMM17AQ99595 171 aa15.98■□□□□ 0.15
PDLIM2-203ENST00000339162 K7EQD1 137 aa15.97■□□□□ 0.15
PDLIM2-203ENST00000339162 DEFB130BP0DP73 79 aa15.97■□□□□ 0.15
PDLIM2-203ENST00000339162 DEFB130AP0DP74 79 aa15.97■□□□□ 0.15
PDLIM2-203ENST00000339162 PCP2Q8IVA1 136 aa15.97■□□□□ 0.15
PDLIM2-203ENST00000339162 TMEM141Q96I45 108 aa15.96■□□□□ 0.15
PDLIM2-203ENST00000339162 COX11Q9Y6N1 276 aa15.96■□□□□ 0.15
PDLIM2-203ENST00000339162 CEMP1Q6PRD7 247 aaPredicted RBP15.96■□□□□ 0.15
PDLIM2-203ENST00000339162 C12orf54Q6X4T0 127 aa15.96■□□□□ 0.15
PDLIM2-203ENST00000339162 TTTY13Q9BZ97 58 aa15.96■□□□□ 0.15
PDLIM2-203ENST00000339162 IGHV4-30-4P0DP06 118 aa15.95■□□□□ 0.14
PDLIM2-203ENST00000339162 PLNP26678 52 aa15.95■□□□□ 0.14
PDLIM2-203ENST00000339162 TRBV7-3A0A075B6L6 115 aa15.95■□□□□ 0.14
PDLIM2-203ENST00000339162 LINC01549A6NIU2 74 aa15.95■□□□□ 0.14
PDLIM2-203ENST00000339162 DEFB4AO15263 64 aa15.95■□□□□ 0.14
PDLIM2-203ENST00000339162 FGF6P10767 208 aa15.95■□□□□ 0.14
PDLIM2-203ENST00000339162 GAGE12JA6NER3 117 aa15.94■□□□□ 0.14
PDLIM2-203ENST00000339162 APOC4P55056 127 aa15.94■□□□□ 0.14
PDLIM2-203ENST00000339162 GAGE4Q13068 117 aa15.94■□□□□ 0.14
PDLIM2-203ENST00000339162 GAGE5Q13069 117 aa15.94■□□□□ 0.14
PDLIM2-203ENST00000339162 PMVKQ15126 192 aa15.94■□□□□ 0.14
PDLIM2-203ENST00000339162 GAGE13Q4V321 117 aa15.94■□□□□ 0.14
PDLIM2-203ENST00000339162 SHISA2Q6UWI4 295 aa15.94■□□□□ 0.14
PDLIM2-203ENST00000339162 CHCHD7Q9BUK0 85 aa15.94■□□□□ 0.14
PDLIM2-203ENST00000339162 CST9LQ9H4G1 147 aa15.94■□□□□ 0.14
PDLIM2-203ENST00000339162 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.94■□□□□ 0.14
PDLIM2-203ENST00000339162 IGKV2-29A2NJV5 120 aaPredicted RBP15.94■□□□□ 0.14
PDLIM2-203ENST00000339162 LOC100131303A0A0U1RQF7 123 aa15.93■□□□□ 0.14
PDLIM2-203ENST00000339162 KRTAP10-11P60412 298 aa15.93■□□□□ 0.14
PDLIM2-203ENST00000339162 KIR2DL5BQ8NHK3 375 aa15.93■□□□□ 0.14
PDLIM2-203ENST00000339162 TRGV4A0A0C4DH28 118 aa15.92■□□□□ 0.14
PDLIM2-203ENST00000339162 COTL1Q14019 142 aa15.92■□□□□ 0.14
PDLIM2-203ENST00000339162 RPL36AP83881 106 aaKnown RBP15.92■□□□□ 0.14
PDLIM2-203ENST00000339162 RPL36ALQ969Q0 106 aaKnown RBP15.92■□□□□ 0.14
PDLIM2-203ENST00000339162 CCL25O15444 150 aa15.91■□□□□ 0.14
PDLIM2-203ENST00000339162 OR11H2Q8NH07 326 aa15.91■□□□□ 0.14
PDLIM2-203ENST00000339162 IGLV4-69A0A075B6H9 119 aa15.91■□□□□ 0.14
PDLIM2-203ENST00000339162 PTTG1IPP53801 180 aa15.91■□□□□ 0.14
PDLIM2-203ENST00000339162 UBE2V1Q13404 147 aa15.91■□□□□ 0.14
PDLIM2-203ENST00000339162 BOD1L2Q8IYS8 172 aa15.91■□□□□ 0.14
PDLIM2-203ENST00000339162 IGLV4-3A0A075B6K6 122 aa15.9■□□□□ 0.14
PDLIM2-203ENST00000339162 TRBV10-1A0A0K0K1A3 114 aa15.9■□□□□ 0.14
PDLIM2-203ENST00000339162 RNASE13Q5GAN3 156 aaKnown RBP15.9■□□□□ 0.14
PDLIM2-203ENST00000339162 C2orf91Q6ZV80 131 aa15.9■□□□□ 0.14
PDLIM2-203ENST00000339162 FHL2Q14192 279 aa15.9■□□□□ 0.14
PDLIM2-203ENST00000339162 SMIM9A6NGZ8 99 aa15.89■□□□□ 0.13
PDLIM2-203ENST00000339162 C11orf86A6NJI1 115 aa15.89■□□□□ 0.13
PDLIM2-203ENST00000339162 MPV17L2Q567V2 206 aa15.89■□□□□ 0.13
PDLIM2-203ENST00000339162 Q6ZVH6 145 aa15.89■□□□□ 0.13
PDLIM2-203ENST00000339162 FAM104AQ969W3 186 aa15.89■□□□□ 0.13
PDLIM2-203ENST00000339162 UBE2D3P61077 147 aa15.87■□□□□ 0.13
PDLIM2-203ENST00000339162 UBE2D2P62837 147 aa15.87■□□□□ 0.13
PDLIM2-203ENST00000339162 FAM222AQ5U5X8 452 aa15.87■□□□□ 0.13
PDLIM2-203ENST00000339162 TRAV8-6A0A0B4J262 113 aa15.87■□□□□ 0.13
PDLIM2-203ENST00000339162 VCX2Q9H322 139 aa15.87■□□□□ 0.13
PDLIM2-203ENST00000339162 IGHV4-28A0A0C4DH34 117 aa15.86■□□□□ 0.13
PDLIM2-203ENST00000339162 TRBV6-4A0A1B0GX49 114 aa15.86■□□□□ 0.13
PDLIM2-203ENST00000339162 NTM-AS1Q6ZSK4 140 aa15.86■□□□□ 0.13
PDLIM2-203ENST00000339162 UBE2D4Q9Y2X8 147 aa15.86■□□□□ 0.13
PDLIM2-203ENST00000339162 BVES-AS1Q5T3Y7 98 aa15.86■□□□□ 0.13
PDLIM2-203ENST00000339162 LINC00612Q8N6U2 182 aa15.85■□□□□ 0.13
PDLIM2-203ENST00000339162 PYGO1Q9Y3Y4 419 aa15.85■□□□□ 0.13
PDLIM2-203ENST00000339162 DAZ4Q86SG3 579 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-203ENST00000339162 MAPKAPK5-AS1Q8N8E1 139 aa15.84■□□□□ 0.13
PDLIM2-203ENST00000339162 DAZ3Q9NR90 486 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-203ENST00000339162 CMYA5Q8N3K9 4069 aa15.84■□□□□ 0.13
PDLIM2-203ENST00000339162 CIDEAO60543 219 aa15.83■□□□□ 0.12
PDLIM2-203ENST00000339162 LINC00694P0DN24 101 aa15.83■□□□□ 0.12
PDLIM2-203ENST00000339162 PCP4P48539 62 aa15.83■□□□□ 0.12
PDLIM2-203ENST00000339162 TMEM170BQ5T4T1 132 aa15.83■□□□□ 0.12
PDLIM2-203ENST00000339162 A0A0J9YXV3 536 aa15.82■□□□□ 0.12
PDLIM2-203ENST00000339162 G3V4G9 280 aa15.82■□□□□ 0.12
PDLIM2-203ENST00000339162 TAX1BP3O14907 124 aa15.82■□□□□ 0.12
PDLIM2-203ENST00000339162 Q6ZUT4 128 aa15.82■□□□□ 0.12
PDLIM2-203ENST00000339162 RNF183Q96D59 192 aa15.81■□□□□ 0.12
PDLIM2-203ENST00000339162 CHAC1Q9BUX1 264 aa15.81■□□□□ 0.12
PDLIM2-203ENST00000339162 EGFEM1PQ0D2K5 195 aa15.8■□□□□ 0.12
PDLIM2-203ENST00000339162 Q8NAQ8 132 aa15.8■□□□□ 0.12
PDLIM2-203ENST00000339162 PRADC1Q9BSG0 188 aa15.8■□□□□ 0.12
PDLIM2-203ENST00000339162 SPANXA1Q9NS26 97 aa15.8■□□□□ 0.12
PDLIM2-203ENST00000339162 AMELXQ99217 191 aa15.8■□□□□ 0.12
PDLIM2-203ENST00000339162 CELA1Q9UNI1 258 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms