RNA–Protein interactions for RNA: ENST00000335509.10

TPCN1-201, Transcript of two pore segment channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPCN1, Length 5,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-201ENST00000335509 PRRC2CQ9Y520 2896 aaKnown RBP12.08□□□□□ -0.48
TPCN1-201ENST00000335509 TMEM89A2RUT3 159 aa12.08□□□□□ -0.48
TPCN1-201ENST00000335509 TNFRSF13BO14836 293 aaPredicted RBP12.07□□□□□ -0.48
TPCN1-201ENST00000335509 SS18L2Q9UHA2 77 aa12.07□□□□□ -0.48
TPCN1-201ENST00000335509 CRIP1P50238 77 aa12.07□□□□□ -0.48
TPCN1-201ENST00000335509 FAM236AA0A1B0GUQ0 79 aa12.06□□□□□ -0.48
TPCN1-201ENST00000335509 FAM236BA0A1B0GV22 79 aa12.06□□□□□ -0.48
TPCN1-201ENST00000335509 NDUFA11Q86Y39 141 aa12.06□□□□□ -0.48
TPCN1-201ENST00000335509 MAP6D1Q9H9H5 199 aa12.06□□□□□ -0.48
TPCN1-201ENST00000335509 SPAG11BQ08648 103 aa12.06□□□□□ -0.48
TPCN1-201ENST00000335509 Q6ZTI0 123 aa12.06□□□□□ -0.48
TPCN1-201ENST00000335509 TRBV10-2A0A0K0K1G8 114 aa12.05□□□□□ -0.48
TPCN1-201ENST00000335509 FUSP35637 526 aaKnown RBP eCLIP12.05□□□□□ -0.48
TPCN1-201ENST00000335509 TMEM263Q8WUH6 116 aaKnown RBP12.05□□□□□ -0.48
TPCN1-201ENST00000335509 CCL18P55774 89 aa12.04□□□□□ -0.48
TPCN1-201ENST00000335509 TRBV10-1A0A0K0K1A3 114 aa12.04□□□□□ -0.48
TPCN1-201ENST00000335509 A0A1B0GX51 115 aa12.04□□□□□ -0.48
TPCN1-201ENST00000335509 CRYGBP07316 175 aa12.04□□□□□ -0.48
TPCN1-201ENST00000335509 MYCNOSP40205 109 aa12.04□□□□□ -0.48
TPCN1-201ENST00000335509 YPEL4Q96NS1 127 aa12.04□□□□□ -0.48
TPCN1-201ENST00000335509 PRO0255Q9UI72 69 aa12.04□□□□□ -0.48
TPCN1-201ENST00000335509 K7EQG2 157 aa12.03□□□□□ -0.48
TPCN1-201ENST00000335509 IGKV2D-26A0A0A0MRZ7 120 aa12.03□□□□□ -0.48
TPCN1-201ENST00000335509 H3BT86 120 aa12.03□□□□□ -0.48
TPCN1-201ENST00000335509 A0A0B4J2C4 111 aa12.03□□□□□ -0.48
TPCN1-201ENST00000335509 NCR3O14931 201 aa12.03□□□□□ -0.48
TPCN1-201ENST00000335509 NDUFA1O15239 70 aa12.03□□□□□ -0.48
TPCN1-201ENST00000335509 C4orf3Q8WVX3 66 aa12.03□□□□□ -0.48
TPCN1-201ENST00000335509 TRAV26-1A0A087WT03 109 aa12.03□□□□□ -0.48
TPCN1-201ENST00000335509 CDKN2A-AS1Q9UH64 79 aa12.02□□□□□ -0.48
TPCN1-201ENST00000335509 SMIM20Q8N5G0 67 aa12.02□□□□□ -0.48
TPCN1-201ENST00000335509 C20orf173Q96LM9 149 aa12.02□□□□□ -0.49
TPCN1-201ENST00000335509 CLPSL1A2RUU4 121 aa12.02□□□□□ -0.49
TPCN1-201ENST00000335509 CITED1Q99966 193 aa12.02□□□□□ -0.49
TPCN1-201ENST00000335509 ZFAND3Q9H8U3 227 aa12.02□□□□□ -0.49
TPCN1-201ENST00000335509 KIAA1549LQ6ZVL6 1849 aa12.01□□□□□ -0.49
TPCN1-201ENST00000335509 TCL1BO95988 128 aa12.01□□□□□ -0.49
TPCN1-201ENST00000335509 ZFAND2AQ8N6M9 145 aa12.01□□□□□ -0.49
TPCN1-201ENST00000335509 A0A0J9YXY3 114 aa12.01□□□□□ -0.49
TPCN1-201ENST00000335509 G3V4G9 280 aa12.01□□□□□ -0.49
TPCN1-201ENST00000335509 C10orf99Q6UWK7 81 aa12.01□□□□□ -0.49
TPCN1-201ENST00000335509 WFDC11Q8NEX6 87 aa12.01□□□□□ -0.49
TPCN1-201ENST00000335509 LTBP2Q14767 1821 aa12□□□□□ -0.49
TPCN1-201ENST00000335509 NFE4Q86UQ8 179 aa12□□□□□ -0.49
TPCN1-201ENST00000335509 DNAJC9-AS1A6NH13 148 aa12□□□□□ -0.49
TPCN1-201ENST00000335509 EBI3Q14213 229 aa12□□□□□ -0.49
TPCN1-201ENST00000335509 LY6LH3BQJ8 138 aa11.99□□□□□ -0.49
TPCN1-201ENST00000335509 NDUFS5O43920 106 aa11.99□□□□□ -0.49
TPCN1-201ENST00000335509 SMAD5-AS1Q9Y6J3 95 aa11.99□□□□□ -0.49
TPCN1-201ENST00000335509 NREPQ16612 68 aa11.99□□□□□ -0.49
TPCN1-201ENST00000335509 TNRC6BQ9UPQ9 1833 aaKnown RBP11.99□□□□□ -0.49
TPCN1-201ENST00000335509 MAPKAPK5-AS1Q8N8E1 139 aa11.99□□□□□ -0.49
TPCN1-201ENST00000335509 ACANP16112 2415 aa11.98□□□□□ -0.49
TPCN1-201ENST00000335509 NEXN-AS1Q8NBZ9 246 aa11.98□□□□□ -0.49
TPCN1-201ENST00000335509 MIAQ16674 131 aa11.98□□□□□ -0.49
TPCN1-201ENST00000335509 PRB2P02812 416 aaPredicted RBP11.98□□□□□ -0.49
TPCN1-201ENST00000335509 LINC00467Q9BRT7 94 aa11.97□□□□□ -0.49
TPCN1-201ENST00000335509 JMJD7-PLA2G4BH0Y9G9 81 aa11.97□□□□□ -0.49
TPCN1-201ENST00000335509 IGLV2-11P01706 119 aa11.97□□□□□ -0.49
TPCN1-201ENST00000335509 TIRAPP58753 221 aa11.96□□□□□ -0.49
TPCN1-201ENST00000335509 ATOX1O00244 68 aa11.96□□□□□ -0.49
TPCN1-201ENST00000335509 ZNF22P17026 224 aaPredicted RBP11.96□□□□□ -0.49
TPCN1-201ENST00000335509 CXCL5P42830 114 aa11.96□□□□□ -0.49
TPCN1-201ENST00000335509 DEFB114Q30KQ6 69 aa11.96□□□□□ -0.49
TPCN1-201ENST00000335509 TM2D2Q9BX73 214 aa11.96□□□□□ -0.49
TPCN1-201ENST00000335509 F8W735 103 aaPredicted RBP11.96□□□□□ -0.5
TPCN1-201ENST00000335509 PSMB8P28062 276 aa11.95□□□□□ -0.5
TPCN1-201ENST00000335509 IGLV4-3A0A075B6K6 122 aa11.95□□□□□ -0.5
TPCN1-201ENST00000335509 RNF185Q96GF1 192 aa11.95□□□□□ -0.5
TPCN1-201ENST00000335509 C14orf132Q9NPU4 83 aa11.95□□□□□ -0.5
TPCN1-201ENST00000335509 DIRC1Q969H9 104 aa11.95□□□□□ -0.5
TPCN1-201ENST00000335509 FSTL3O95633 263 aa11.94□□□□□ -0.5
TPCN1-201ENST00000335509 HIST2H2BDQ6DRA6 164 aa11.94□□□□□ -0.5
TPCN1-201ENST00000335509 PROK1P58294 105 aa11.94□□□□□ -0.5
TPCN1-201ENST00000335509 LINC00269Q8N2A0 174 aa11.94□□□□□ -0.5
TPCN1-201ENST00000335509 PRO3102Q9H379 93 aa11.94□□□□□ -0.5
TPCN1-201ENST00000335509 SPANXCQ9NY87 97 aa11.94□□□□□ -0.5
TPCN1-201ENST00000335509 FAM222AQ5U5X8 452 aa11.93□□□□□ -0.5
TPCN1-201ENST00000335509 M0QY20 66 aa11.93□□□□□ -0.5
TPCN1-201ENST00000335509 ODF3Q96PU9 254 aa11.93□□□□□ -0.5
TPCN1-201ENST00000335509 TEX49A0A1B0GTD5 131 aa11.93□□□□□ -0.5
TPCN1-201ENST00000335509 HIGD2BQ4VC39 106 aa11.93□□□□□ -0.5
TPCN1-201ENST00000335509 Q8N976 141 aa11.92□□□□□ -0.5
TPCN1-201ENST00000335509 C11orf21Q9P2W6 132 aa11.92□□□□□ -0.5
TPCN1-201ENST00000335509 TMEM258P61165 79 aa11.92□□□□□ -0.5
TPCN1-201ENST00000335509 Q6YL49 198 aa11.91□□□□□ -0.5
TPCN1-201ENST00000335509 GAS8-AS1O95177 125 aa11.91□□□□□ -0.5
TPCN1-201ENST00000335509 INSL3P51460 131 aa11.91□□□□□ -0.5
TPCN1-201ENST00000335509 PIK3CD-AS1Q5SR53 167 aa11.9□□□□□ -0.5
TPCN1-201ENST00000335509 TMEM256-PLSCR3K7ERE1 68 aa11.9□□□□□ -0.5
TPCN1-201ENST00000335509 IGHV4-31P0DP07 118 aa11.9□□□□□ -0.5
TPCN1-201ENST00000335509 C11orf71Q6IPW1 123 aa11.9□□□□□ -0.5
TPCN1-201ENST00000335509 EPG5Q9HCE0 2579 aa11.89□□□□□ -0.51
TPCN1-201ENST00000335509 A8MZ25 164 aa11.89□□□□□ -0.51
TPCN1-201ENST00000335509 PRR9Q5T870 116 aa11.89□□□□□ -0.51
TPCN1-201ENST00000335509 MUC4Q99102 2169 aa11.89□□□□□ -0.51
TPCN1-201ENST00000335509 REG3AQ06141 175 aa11.88□□□□□ -0.51
TPCN1-201ENST00000335509 MT-ATP8P03928 68 aa11.88□□□□□ -0.51
TPCN1-201ENST00000335509 RNASE3P12724 160 aaKnown RBP11.88□□□□□ -0.51
TPCN1-201ENST00000335509 LINC00643Q86TS7 51 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms