RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 FAM19A5Q7Z5A7 132 aaPredicted RBP15.53■□□□□ 0.08
SH3RF3-201ENST00000309415 NACAE9PAV3 2078 aa15.53■□□□□ 0.08
SH3RF3-201ENST00000309415 ODF1Q14990 250 aa15.53■□□□□ 0.08
SH3RF3-201ENST00000309415 LY6LH3BQJ8 138 aa15.53■□□□□ 0.08
SH3RF3-201ENST00000309415 PDE6GP18545 87 aa15.53■□□□□ 0.08
SH3RF3-201ENST00000309415 FXYD2P54710 66 aa15.52■□□□□ 0.08
SH3RF3-201ENST00000309415 PLCE1Q9P212 2302 aa15.52■□□□□ 0.08
SH3RF3-201ENST00000309415 IGKV4-1P06312 121 aa15.52■□□□□ 0.07
SH3RF3-201ENST00000309415 NEXN-AS1Q8NBZ9 246 aa15.52■□□□□ 0.07
SH3RF3-201ENST00000309415 MIAQ16674 131 aa15.51■□□□□ 0.07
SH3RF3-201ENST00000309415 COA6Q5JTJ3 125 aaKnown RBP15.51■□□□□ 0.07
SH3RF3-201ENST00000309415 CRYGBP07316 175 aa15.51■□□□□ 0.07
SH3RF3-201ENST00000309415 P0C879 139 aa15.5■□□□□ 0.07
SH3RF3-201ENST00000309415 UBE2D1P51668 147 aa15.5■□□□□ 0.07
SH3RF3-201ENST00000309415 SPANXCQ9NY87 97 aa15.5■□□□□ 0.07
SH3RF3-201ENST00000309415 TRBV10-2A0A0K0K1G8 114 aa15.5■□□□□ 0.07
SH3RF3-201ENST00000309415 CFAP126Q5VTH2 177 aa15.5■□□□□ 0.07
SH3RF3-201ENST00000309415 TRBV6-8A0A0A6YYG3 113 aa15.49■□□□□ 0.07
SH3RF3-201ENST00000309415 TRBV6-4A0A1B0GX49 114 aa15.49■□□□□ 0.07
SH3RF3-201ENST00000309415 SHANK1Q9Y566 2161 aa15.49■□□□□ 0.07
SH3RF3-201ENST00000309415 COL4A3Q01955 1670 aa15.49■□□□□ 0.07
SH3RF3-201ENST00000309415 IGKV2D-26A0A0A0MRZ7 120 aa15.48■□□□□ 0.07
SH3RF3-201ENST00000309415 KIR2DL5BA0A0G2JN68 375 aa15.48■□□□□ 0.07
SH3RF3-201ENST00000309415 KIR2DL5BA0A0G2JPC4 375 aa15.48■□□□□ 0.07
SH3RF3-201ENST00000309415 C1orf229Q6ZS94 237 aaPredicted RBP15.48■□□□□ 0.07
SH3RF3-201ENST00000309415 KIR2DL5AQ8N109 375 aa15.48■□□□□ 0.07
SH3RF3-201ENST00000309415 BBC3Q96PG8 261 aaPredicted RBP15.48■□□□□ 0.07
SH3RF3-201ENST00000309415 SYCNQ0VAF6 134 aa15.48■□□□□ 0.07
SH3RF3-201ENST00000309415 ZFAND3Q9H8U3 227 aa15.47■□□□□ 0.07
SH3RF3-201ENST00000309415 ATOX1O00244 68 aa15.46■□□□□ 0.07
SH3RF3-201ENST00000309415 BDP1A6H8Y1 2624 aa15.46■□□□□ 0.07
SH3RF3-201ENST00000309415 DENND4AQ7Z401 1863 aa15.46■□□□□ 0.07
SH3RF3-201ENST00000309415 TEN1Q86WV5 123 aa15.46■□□□□ 0.06
SH3RF3-201ENST00000309415 COL4A4P53420 1690 aaPredicted RBP15.46■□□□□ 0.06
SH3RF3-201ENST00000309415 TNRC6BQ9UPQ9 1833 aaKnown RBP15.45■□□□□ 0.06
SH3RF3-201ENST00000309415 GDF5OSQ5U4N7 250 aa15.45■□□□□ 0.06
SH3RF3-201ENST00000309415 A0A0J9YXY3 114 aa15.44■□□□□ 0.06
SH3RF3-201ENST00000309415 IGLC6P0CF74 106 aa15.44■□□□□ 0.06
SH3RF3-201ENST00000309415 KPRPQ5T749 579 aaPredicted RBP15.44■□□□□ 0.06
SH3RF3-201ENST00000309415 BRWD1-AS2P59051 145 aa15.44■□□□□ 0.06
SH3RF3-201ENST00000309415 CASC2Q6XLA1 102 aa15.44■□□□□ 0.06
SH3RF3-201ENST00000309415 H3BT86 120 aa15.44■□□□□ 0.06
SH3RF3-201ENST00000309415 LINC00322Q6ZN03 302 aaPredicted RBP15.44■□□□□ 0.06
SH3RF3-201ENST00000309415 TNRC6AQ8NDV7 1962 aaKnown RBP15.44■□□□□ 0.06
SH3RF3-201ENST00000309415 C11orf1Q9H5F2 150 aa15.44■□□□□ 0.06
SH3RF3-201ENST00000309415 OTOGLQ3ZCN5 2332 aa15.43■□□□□ 0.06
SH3RF3-201ENST00000309415 BPY2O14599 106 aa15.43■□□□□ 0.06
SH3RF3-201ENST00000309415 SMIM20Q8N5G0 67 aa15.43■□□□□ 0.06
SH3RF3-201ENST00000309415 C18orf65Q6ZTR6 163 aa15.42■□□□□ 0.06
SH3RF3-201ENST00000309415 FRMD6-AS1P0C7T7 363 aa15.42■□□□□ 0.06
SH3RF3-201ENST00000309415 UPK3BQ9BT76 320 aa15.42■□□□□ 0.06
SH3RF3-201ENST00000309415 CDKN2A-AS1Q9UH64 79 aa15.42■□□□□ 0.06
SH3RF3-201ENST00000309415 XAGE1AQ9HD64 81 aa15.41■□□□□ 0.06
SH3RF3-201ENST00000309415 WFDC10AQ9H1F0 79 aa15.4■□□□□ 0.06
SH3RF3-201ENST00000309415 CDPF1Q6NVV7 123 aa15.4■□□□□ 0.06
SH3RF3-201ENST00000309415 TDRG1Q3Y452 100 aa15.4■□□□□ 0.06
SH3RF3-201ENST00000309415 FAM236AA0A1B0GUQ0 79 aa15.39■□□□□ 0.05
SH3RF3-201ENST00000309415 FAM236BA0A1B0GV22 79 aa15.39■□□□□ 0.05
SH3RF3-201ENST00000309415 CHD3Q12873 2000 aaKnown RBP15.39■□□□□ 0.05
SH3RF3-201ENST00000309415 IBA57-AS1B1ANH7 110 aa15.39■□□□□ 0.05
SH3RF3-201ENST00000309415 TNCP24821 2201 aa15.39■□□□□ 0.05
SH3RF3-201ENST00000309415 A0A1B0GXF2 115 aa15.39■□□□□ 0.05
SH3RF3-201ENST00000309415 Q8N976 141 aa15.39■□□□□ 0.05
SH3RF3-201ENST00000309415 ZNF706Q9Y5V0 76 aaPredicted RBP15.39■□□□□ 0.05
SH3RF3-201ENST00000309415 NOTCH2Q04721 2471 aa15.38■□□□□ 0.05
SH3RF3-201ENST00000309415 IGLV4-3A0A075B6K6 122 aa15.38■□□□□ 0.05
SH3RF3-201ENST00000309415 M0QY20 66 aa15.38■□□□□ 0.05
SH3RF3-201ENST00000309415 OXLD1Q5BKU9 147 aa15.38■□□□□ 0.05
SH3RF3-201ENST00000309415 PROK1P58294 105 aa15.37■□□□□ 0.05
SH3RF3-201ENST00000309415 OBSL1O75147 1896 aa15.37■□□□□ 0.05
SH3RF3-201ENST00000309415 SMR3AQ99954 134 aa15.37■□□□□ 0.05
SH3RF3-201ENST00000309415 A0A0J9YWU9 116 aa15.37■□□□□ 0.05
SH3RF3-201ENST00000309415 IGLV2-8P01709 118 aa15.37■□□□□ 0.05
SH3RF3-201ENST00000309415 C9orf85Q96MD7 179 aa15.37■□□□□ 0.05
SH3RF3-201ENST00000309415 UBE2D4Q9Y2X8 147 aa15.37■□□□□ 0.05
SH3RF3-201ENST00000309415 SPANXB1Q9NS25 103 aaPredicted RBP15.37■□□□□ 0.05
SH3RF3-201ENST00000309415 LELP1Q5T871 98 aa15.36■□□□□ 0.05
SH3RF3-201ENST00000309415 EIF4EBP1Q13541 118 aaPredicted RBP15.36■□□□□ 0.05
SH3RF3-201ENST00000309415 NANOS2P60321 138 aaKnown RBP15.36■□□□□ 0.05
SH3RF3-201ENST00000309415 CLUHP3Q96NS8 147 aa15.36■□□□□ 0.05
SH3RF3-201ENST00000309415 TTC28Q96AY4 2481 aa15.36■□□□□ 0.05
SH3RF3-201ENST00000309415 WFDC2Q14508 124 aa15.36■□□□□ 0.05
SH3RF3-201ENST00000309415 ACACBO00763 2458 aa15.35■□□□□ 0.05
SH3RF3-201ENST00000309415 NDUFA7O95182 113 aa15.35■□□□□ 0.05
SH3RF3-201ENST00000309415 CUL9Q8IWT3 2517 aa15.35■□□□□ 0.05
SH3RF3-201ENST00000309415 RBX1P62877 108 aa15.35■□□□□ 0.05
SH3RF3-201ENST00000309415 Q6ZPA2 131 aa15.35■□□□□ 0.05
SH3RF3-201ENST00000309415 Q8N6K4 173 aa15.35■□□□□ 0.05
SH3RF3-201ENST00000309415 TMEM223A0PJW6 202 aa15.34■□□□□ 0.05
SH3RF3-201ENST00000309415 ZNF106Q9H2Y7 1883 aaKnown RBP15.34■□□□□ 0.05
SH3RF3-201ENST00000309415 ZNF22P17026 224 aaPredicted RBP15.33■□□□□ 0.04
SH3RF3-201ENST00000309415 MLST8Q9BVC4 326 aa15.33■□□□□ 0.04
SH3RF3-201ENST00000309415 LOC107984640A0A0U1RRK4 108 aa15.32■□□□□ 0.04
SH3RF3-201ENST00000309415 IGLV1-40P01703 118 aa15.32■□□□□ 0.04
SH3RF3-201ENST00000309415 IGHV4-30-4P0DP06 118 aa15.32■□□□□ 0.04
SH3RF3-201ENST00000309415 IGLV4-69A0A075B6H9 119 aa15.32■□□□□ 0.04
SH3RF3-201ENST00000309415 CD164L2Q6UWJ8 174 aa15.32■□□□□ 0.04
SH3RF3-201ENST00000309415 IGKV2-28A0A075B6P5 120 aa15.32■□□□□ 0.04
SH3RF3-201ENST00000309415 IGKV2D-28P01615 120 aa15.32■□□□□ 0.04
SH3RF3-201ENST00000309415 FOXI1Q12951 378 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms