RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 PLNP26678 52 aa9.68□□□□□ -0.86
CHMP4C-201ENST00000297265 HINT1P49773 126 aaPredicted RBP9.68□□□□□ -0.86
CHMP4C-201ENST00000297265 CHCHD7Q9BUK0 85 aa9.68□□□□□ -0.86
CHMP4C-201ENST00000297265 NMUP48645 174 aa9.68□□□□□ -0.86
CHMP4C-201ENST00000297265 PMVKQ15126 192 aa9.68□□□□□ -0.86
CHMP4C-201ENST00000297265 BATFQ16520 125 aa9.68□□□□□ -0.86
CHMP4C-201ENST00000297265 MPV17L2Q567V2 206 aa9.68□□□□□ -0.86
CHMP4C-201ENST00000297265 X6R8D5 127 aa9.68□□□□□ -0.86
CHMP4C-201ENST00000297265 GAGE12BA1L429 117 aa9.67□□□□□ -0.86
CHMP4C-201ENST00000297265 GAGE7O76087 117 aa9.67□□□□□ -0.86
CHMP4C-201ENST00000297265 GAGE12FP0CL80 117 aa9.67□□□□□ -0.86
CHMP4C-201ENST00000297265 GAGE12GP0CL81 117 aa9.67□□□□□ -0.86
CHMP4C-201ENST00000297265 GAGE12IP0CL82 117 aa9.67□□□□□ -0.86
CHMP4C-201ENST00000297265 SLC25A29Q8N8R3 303 aa9.67□□□□□ -0.86
CHMP4C-201ENST00000297265 IGHV3-38A0A0C4DH36 116 aa9.66□□□□□ -0.86
CHMP4C-201ENST00000297265 PKD1L1Q8TDX9 2849 aa9.66□□□□□ -0.86
CHMP4C-201ENST00000297265 STAB1Q9NY15 2570 aa9.66□□□□□ -0.86
CHMP4C-201ENST00000297265 ZNRF2Q8NHG8 242 aa9.66□□□□□ -0.86
CHMP4C-201ENST00000297265 PHLDA1Q8WV24 401 aaPredicted RBP9.66□□□□□ -0.86
CHMP4C-201ENST00000297265 PYGO1Q9Y3Y4 419 aa9.66□□□□□ -0.86
CHMP4C-201ENST00000297265 IGLV4-3A0A075B6K6 122 aa9.65□□□□□ -0.86
CHMP4C-201ENST00000297265 TRBV7-3A0A075B6L6 115 aa9.65□□□□□ -0.86
CHMP4C-201ENST00000297265 C11orf86A6NJI1 115 aa9.65□□□□□ -0.86
CHMP4C-201ENST00000297265 PRIMA1Q86XR5 153 aa9.65□□□□□ -0.86
CHMP4C-201ENST00000297265 MAPKAPK5-AS1Q8N8E1 139 aa9.65□□□□□ -0.86
CHMP4C-201ENST00000297265 K7EQD1 137 aa9.64□□□□□ -0.87
CHMP4C-201ENST00000297265 SIVA1O15304 175 aa9.64□□□□□ -0.87
CHMP4C-201ENST00000297265 EMP1P54849 157 aa9.64□□□□□ -0.87
CHMP4C-201ENST00000297265 BVES-AS1Q5T3Y7 98 aa9.64□□□□□ -0.87
CHMP4C-201ENST00000297265 CEMP1Q6PRD7 247 aaPredicted RBP9.64□□□□□ -0.87
CHMP4C-201ENST00000297265 LINC00612Q8N6U2 182 aa9.64□□□□□ -0.87
CHMP4C-201ENST00000297265 TRBV10-1A0A0K0K1A3 114 aa9.64□□□□□ -0.87
CHMP4C-201ENST00000297265 ANK2Q01484 3957 aa9.63□□□□□ -0.87
CHMP4C-201ENST00000297265 TRGV2A0A075B6R0 118 aa9.63□□□□□ -0.87
CHMP4C-201ENST00000297265 FHL2Q14192 279 aa9.63□□□□□ -0.87
CHMP4C-201ENST00000297265 NTM-AS1Q6ZSK4 140 aa9.63□□□□□ -0.87
CHMP4C-201ENST00000297265 KIR2DL5BQ8NHK3 375 aa9.63□□□□□ -0.87
CHMP4C-201ENST00000297265 AMELXQ99217 191 aa9.63□□□□□ -0.87
CHMP4C-201ENST00000297265 ZMAT5Q9UDW3 170 aaKnown RBP9.63□□□□□ -0.87
CHMP4C-201ENST00000297265 UBE2D4Q9Y2X8 147 aa9.63□□□□□ -0.87
CHMP4C-201ENST00000297265 UBE2D3P61077 147 aa9.62□□□□□ -0.87
CHMP4C-201ENST00000297265 UBE2D2P62837 147 aa9.62□□□□□ -0.87
CHMP4C-201ENST00000297265 COL5A1-AS1Q5SY13 56 aa9.62□□□□□ -0.87
CHMP4C-201ENST00000297265 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.62□□□□□ -0.87
CHMP4C-201ENST00000297265 IGKV2-29A2NJV5 120 aaPredicted RBP9.62□□□□□ -0.87
CHMP4C-201ENST00000297265 NFE4Q86UQ8 179 aa9.62□□□□□ -0.87
CHMP4C-201ENST00000297265 TRBV25-1A0A075B6N4 114 aa9.61□□□□□ -0.87
CHMP4C-201ENST00000297265 LOC100131303A0A0U1RQF7 123 aa9.61□□□□□ -0.87
CHMP4C-201ENST00000297265 TRBV6-4A0A1B0GX49 114 aa9.61□□□□□ -0.87
CHMP4C-201ENST00000297265 SMIM9A6NGZ8 99 aa9.61□□□□□ -0.87
CHMP4C-201ENST00000297265 E9PLD3 99 aa9.61□□□□□ -0.87
CHMP4C-201ENST00000297265 CIDEAO60543 219 aa9.61□□□□□ -0.87
CHMP4C-201ENST00000297265 COTL1Q14019 142 aa9.61□□□□□ -0.87
CHMP4C-201ENST00000297265 OXLD1Q5BKU9 147 aa9.61□□□□□ -0.87
CHMP4C-201ENST00000297265 TRAV8-6A0A0B4J262 113 aa9.6□□□□□ -0.87
CHMP4C-201ENST00000297265 RPL36AP83881 106 aaKnown RBP9.6□□□□□ -0.87
CHMP4C-201ENST00000297265 DEFB135Q30KP9 77 aa9.6□□□□□ -0.87
CHMP4C-201ENST00000297265 C12orf54Q6X4T0 127 aa9.6□□□□□ -0.87
CHMP4C-201ENST00000297265 RPL36ALQ969Q0 106 aaKnown RBP9.6□□□□□ -0.87
CHMP4C-201ENST00000297265 GAGE12JA6NER3 117 aa9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 NPSP0C0P6 89 aa9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 CRYBA4P53673 196 aa9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 GAGE1Q13065 139 aa9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 GAGE4Q13068 117 aa9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 GAGE5Q13069 117 aa9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 KRTAP21-3Q3LHN1 58 aa9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 GAGE13Q4V321 117 aa9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 PAPPA-AS1Q5QFB9 102 aa9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 VCX2Q9H322 139 aa9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 HIGD1BQ9P298 99 aa9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 LINC00694P0DN24 101 aa9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 IGHV4-30-4P0DP06 118 aa9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 KRTAP10-11P60412 298 aa9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 TMEM97Q5BJF2 176 aa9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 DAZ4Q86SG3 579 aaKnown RBP9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 SBSPONQ8IVN8 264 aa9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 PRADC1Q9BSG0 188 aa9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 DAZ3Q9NR90 486 aaKnown RBP9.59□□□□□ -0.87
CHMP4C-201ENST00000297265 DNAH3Q8TD57 4116 aa9.58□□□□□ -0.88
CHMP4C-201ENST00000297265 A0A0J9YXV3 536 aa9.58□□□□□ -0.88
CHMP4C-201ENST00000297265 DEFB130BP0DP73 79 aa9.58□□□□□ -0.88
CHMP4C-201ENST00000297265 DEFB130AP0DP74 79 aa9.58□□□□□ -0.88
CHMP4C-201ENST00000297265 RNASE13Q5GAN3 156 aaKnown RBP9.58□□□□□ -0.88
CHMP4C-201ENST00000297265 Q6ZVH6 145 aa9.58□□□□□ -0.88
CHMP4C-201ENST00000297265 SPANXA1Q9NS26 97 aa9.58□□□□□ -0.88
CHMP4C-201ENST00000297265 APOC4P55056 127 aa9.57□□□□□ -0.88
CHMP4C-201ENST00000297265 TRGV4A0A0C4DH28 118 aa9.57□□□□□ -0.88
CHMP4C-201ENST00000297265 MRPS36P82909 103 aaKnown RBP9.57□□□□□ -0.88
CHMP4C-201ENST00000297265 Q6ZUT4 128 aa9.57□□□□□ -0.88
CHMP4C-201ENST00000297265 ZNF22P17026 224 aaPredicted RBP9.56□□□□□ -0.88
CHMP4C-201ENST00000297265 TMEM170BQ5T4T1 132 aa9.56□□□□□ -0.88
CHMP4C-201ENST00000297265 C3orf56Q8N813 242 aa9.56□□□□□ -0.88
CHMP4C-201ENST00000297265 OR11H2Q8NH07 326 aa9.56□□□□□ -0.88
CHMP4C-201ENST00000297265 CHAC1Q9BUX1 264 aa9.56□□□□□ -0.88
CHMP4C-201ENST00000297265 TIMM21Q9BVV7 248 aa9.56□□□□□ -0.88
CHMP4C-201ENST00000297265 GTSF1LQ9H1H1 148 aa9.56□□□□□ -0.88
CHMP4C-201ENST00000297265 COL6A5A8TX70 2615 aa9.56□□□□□ -0.88
CHMP4C-201ENST00000297265 MYMXA0A1B0GTQ4 84 aa9.55□□□□□ -0.88
CHMP4C-201ENST00000297265 DEFB4AO15263 64 aa9.55□□□□□ -0.88
CHMP4C-201ENST00000297265 TSPEAR-AS2P59090 65 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms