RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 NOTCH2Q04721 2471 aa8.78□□□□□ -1
SNIP1-201ENST00000296215 TRBV10-3A0A0K0K1G6 114 aa8.78□□□□□ -1
SNIP1-201ENST00000296215 E7EUB6 86 aa8.78□□□□□ -1
SNIP1-201ENST00000296215 PRR15Q8IV56 129 aa8.78□□□□□ -1
SNIP1-201ENST00000296215 CXCL6P80162 114 aa8.78□□□□□ -1
SNIP1-201ENST00000296215 EIF4EBP1Q13541 118 aaPredicted RBP8.78□□□□□ -1
SNIP1-201ENST00000296215 CTSZQ9UBR2 303 aa8.78□□□□□ -1
SNIP1-201ENST00000296215 RBM12B-AS1Q9P1G2 102 aa8.78□□□□□ -1
SNIP1-201ENST00000296215 KLK9Q9UKQ9 250 aa8.78□□□□□ -1
SNIP1-201ENST00000296215 H3BQ85 93 aa8.77□□□□□ -1
SNIP1-201ENST00000296215 ZNF73O43830 326 aaPredicted RBP8.77□□□□□ -1
SNIP1-201ENST00000296215 GAFA1Q96PS6 74 aa8.77□□□□□ -1
SNIP1-201ENST00000296215 IGLV4-69A0A075B6H9 119 aa8.77□□□□□ -1.01
SNIP1-201ENST00000296215 CASC2Q6XLA1 102 aa8.77□□□□□ -1.01
SNIP1-201ENST00000296215 UTRNP46939 3433 aa8.76□□□□□ -1.01
SNIP1-201ENST00000296215 NDUFA1O15239 70 aa8.76□□□□□ -1.01
SNIP1-201ENST00000296215 C22orf34Q6ZV56 151 aa8.76□□□□□ -1.01
SNIP1-201ENST00000296215 CACNA1HO95180 2353 aa8.76□□□□□ -1.01
SNIP1-201ENST00000296215 IGLV4-3A0A075B6K6 122 aa8.76□□□□□ -1.01
SNIP1-201ENST00000296215 MDS2Q8NDY4 140 aa8.76□□□□□ -1.01
SNIP1-201ENST00000296215 COL4A3Q01955 1670 aa8.76□□□□□ -1.01
SNIP1-201ENST00000296215 BDP1A6H8Y1 2624 aa8.76□□□□□ -1.01
SNIP1-201ENST00000296215 ATRXP46100 2492 aa8.75□□□□□ -1.01
SNIP1-201ENST00000296215 I3L2K1 104 aa8.75□□□□□ -1.01
SNIP1-201ENST00000296215 CDKN2A-AS1Q9UH64 79 aa8.75□□□□□ -1.01
SNIP1-201ENST00000296215 IGHV3-11P01762 117 aa8.75□□□□□ -1.01
SNIP1-201ENST00000296215 CCL4P13236 92 aa8.75□□□□□ -1.01
SNIP1-201ENST00000296215 CNFNQ9BYD5 112 aa8.75□□□□□ -1.01
SNIP1-201ENST00000296215 PLXNB3Q9ULL4 1909 aa8.75□□□□□ -1.01
SNIP1-201ENST00000296215 H7BZZ5 65 aa8.74□□□□□ -1.01
SNIP1-201ENST00000296215 ATG2AQ2TAZ0 1938 aa8.74□□□□□ -1.01
SNIP1-201ENST00000296215 IGLV3-12A0A075B6K2 115 aa8.74□□□□□ -1.01
SNIP1-201ENST00000296215 PLXNA2O75051 1894 aa8.74□□□□□ -1.01
SNIP1-201ENST00000296215 CD164L2Q6UWJ8 174 aa8.74□□□□□ -1.01
SNIP1-201ENST00000296215 IGLV2-18A0A075B6J9 118 aa8.74□□□□□ -1.01
SNIP1-201ENST00000296215 IGIPA6NJ69 53 aa8.74□□□□□ -1.01
SNIP1-201ENST00000296215 TRGV2A0A075B6R0 118 aa8.73□□□□□ -1.01
SNIP1-201ENST00000296215 C5orf67F2Z3F1 127 aa8.73□□□□□ -1.01
SNIP1-201ENST00000296215 BPESC1Q9GZL8 116 aa8.73□□□□□ -1.01
SNIP1-201ENST00000296215 ZNF503-AS2A6NEH8 195 aa8.73□□□□□ -1.01
SNIP1-201ENST00000296215 COL4A5P29400 1685 aa8.73□□□□□ -1.01
SNIP1-201ENST00000296215 SPTAN1Q13813 2472 aaKnown RBP8.73□□□□□ -1.01
SNIP1-201ENST00000296215 IGHV3-16A0A0C4DH30 117 aa8.73□□□□□ -1.01
SNIP1-201ENST00000296215 HCG22E2RYF7 251 aa8.73□□□□□ -1.01
SNIP1-201ENST00000296215 MED14OSP0DP75 135 aa8.73□□□□□ -1.01
SNIP1-201ENST00000296215 SMIM11BQ8TCY0 68 aa8.73□□□□□ -1.01
SNIP1-201ENST00000296215 K7EIM0 57 aa8.73□□□□□ -1.01
SNIP1-201ENST00000296215 LIMD2Q9BT23 127 aa8.73□□□□□ -1.01
SNIP1-201ENST00000296215 CELA1Q9UNI1 258 aa8.73□□□□□ -1.01
SNIP1-201ENST00000296215 COL6A6A6NMZ7 2263 aa8.72□□□□□ -1.01
SNIP1-201ENST00000296215 WT1P19544 449 aaPredicted RBP8.72□□□□□ -1.01
SNIP1-201ENST00000296215 Q6ZVQ6 151 aa8.72□□□□□ -1.01
SNIP1-201ENST00000296215 HOXB4P17483 251 aaPredicted RBP8.71□□□□□ -1.01
SNIP1-201ENST00000296215 MALRD1Q5VYJ5 2156 aa8.71□□□□□ -1.02
SNIP1-201ENST00000296215 LCA10Q71F78 164 aa8.71□□□□□ -1.02
SNIP1-201ENST00000296215 GRNP28799 593 aaKnown RBP8.71□□□□□ -1.02
SNIP1-201ENST00000296215 TCF20Q9UGU0 1960 aaKnown RBP8.7□□□□□ -1.02
SNIP1-201ENST00000296215 FAM30AQ9NZY2 134 aa8.7□□□□□ -1.02
SNIP1-201ENST00000296215 K7ENP7 123 aa8.7□□□□□ -1.02
SNIP1-201ENST00000296215 IGHV1-46P01743 117 aa8.7□□□□□ -1.02
SNIP1-201ENST00000296215 KLKP1Q107X0 134 aa8.7□□□□□ -1.02
SNIP1-201ENST00000296215 C9orf47Q6ZRZ4 202 aa8.7□□□□□ -1.02
SNIP1-201ENST00000296215 IGHV3-53P01767 116 aa8.69□□□□□ -1.02
SNIP1-201ENST00000296215 B3GALT5-AS1P59052 145 aa8.69□□□□□ -1.02
SNIP1-201ENST00000296215 A0A087WYN8 130 aa8.69□□□□□ -1.02
SNIP1-201ENST00000296215 OXTP01178 125 aa8.69□□□□□ -1.02
SNIP1-201ENST00000296215 SPINK13Q1W4C9 94 aa8.69□□□□□ -1.02
SNIP1-201ENST00000296215 ABCA4P78363 2273 aa8.68□□□□□ -1.02
SNIP1-201ENST00000296215 VMO1Q7Z5L0 202 aa8.68□□□□□ -1.02
SNIP1-201ENST00000296215 KIF26AQ9ULI4 1882 aaPredicted RBP8.68□□□□□ -1.02
SNIP1-201ENST00000296215 IGHV1-18A0A0C4DH31 117 aa8.68□□□□□ -1.02
SNIP1-201ENST00000296215 LINC01547P58512 204 aaPredicted RBP8.68□□□□□ -1.02
SNIP1-201ENST00000296215 RHPN1-AS1Q9BWJ2 59 aa8.68□□□□□ -1.02
SNIP1-201ENST00000296215 CACNA1EQ15878 2313 aa8.68□□□□□ -1.02
SNIP1-201ENST00000296215 IGHV4-4A0A075B6R2 117 aa8.68□□□□□ -1.02
SNIP1-201ENST00000296215 TRGV1A0A0A0MS02 117 aa8.68□□□□□ -1.02
SNIP1-201ENST00000296215 A8MUN3 132 aa8.68□□□□□ -1.02
SNIP1-201ENST00000296215 ESM1Q9NQ30 184 aa8.68□□□□□ -1.02
SNIP1-201ENST00000296215 MGAMO43451 1857 aa8.68□□□□□ -1.02
SNIP1-201ENST00000296215 CHD8Q9HCK8 2581 aa8.67□□□□□ -1.02
SNIP1-201ENST00000296215 TRGV4A0A0C4DH28 118 aa8.67□□□□□ -1.02
SNIP1-201ENST00000296215 ZNF580Q9UK33 172 aa8.67□□□□□ -1.02
SNIP1-201ENST00000296215 LINC01546A6NGU7 62 aa8.67□□□□□ -1.02
SNIP1-201ENST00000296215 NTM-AS1Q6ZSK4 140 aa8.67□□□□□ -1.02
SNIP1-201ENST00000296215 SAP25Q8TEE9 199 aa8.67□□□□□ -1.02
SNIP1-201ENST00000296215 KIAA1671Q9BY89 1806 aa8.67□□□□□ -1.02
SNIP1-201ENST00000296215 LTBP1Q14766 1721 aa8.67□□□□□ -1.02
SNIP1-201ENST00000296215 C7orf65Q6ZTY9 151 aa8.66□□□□□ -1.02
SNIP1-201ENST00000296215 POLR2KP53803 58 aaKnown RBP8.66□□□□□ -1.02
SNIP1-201ENST00000296215 Q0VFX4 171 aa8.66□□□□□ -1.02
SNIP1-201ENST00000296215 DAZAP2Q15038 168 aaPredicted RBP8.66□□□□□ -1.02
SNIP1-201ENST00000296215 ITLN2Q8WWU7 325 aaPredicted RBP8.66□□□□□ -1.02
SNIP1-201ENST00000296215 SPAG11BQ08648 103 aa8.66□□□□□ -1.02
SNIP1-201ENST00000296215 DIRC1Q969H9 104 aa8.66□□□□□ -1.02
SNIP1-201ENST00000296215 CYSTM1Q9H1C7 97 aa8.66□□□□□ -1.02
SNIP1-201ENST00000296215 WFDC10AQ9H1F0 79 aa8.66□□□□□ -1.02
SNIP1-201ENST00000296215 MED13LQ71F56 2210 aa8.66□□□□□ -1.02
SNIP1-201ENST00000296215 DEFB112Q30KQ8 113 aa8.65□□□□□ -1.02
SNIP1-201ENST00000296215 PLXNA4Q9HCM2 1894 aa8.65□□□□□ -1.02
SNIP1-201ENST00000296215 IGHV7-4-1A0A0J9YVY3 117 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms