RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 SCXQ7RTU7 201 aa11.52□□□□□ -0.57
SHROOM4-201ENST00000289292 CACNA1GO43497 2377 aa11.52□□□□□ -0.57
SHROOM4-201ENST00000289292 Q6ZTI0 123 aa11.52□□□□□ -0.57
SHROOM4-201ENST00000289292 CDKN2A-AS1Q9UH64 79 aa11.52□□□□□ -0.57
SHROOM4-201ENST00000289292 IGLV4-3A0A075B6K6 122 aa11.52□□□□□ -0.57
SHROOM4-201ENST00000289292 KLK12Q9UKR0 248 aa11.51□□□□□ -0.57
SHROOM4-201ENST00000289292 TMEM256-PLSCR3K7ERE1 68 aa11.51□□□□□ -0.57
SHROOM4-201ENST00000289292 SPAG11BQ08648 103 aa11.51□□□□□ -0.57
SHROOM4-201ENST00000289292 XGP55808 180 aa11.51□□□□□ -0.57
SHROOM4-201ENST00000289292 MUC22E2RYF6 1773 aaPredicted RBP11.51□□□□□ -0.57
SHROOM4-201ENST00000289292 Q8N976 141 aa11.5□□□□□ -0.57
SHROOM4-201ENST00000289292 ENHOQ6UWT2 76 aa11.5□□□□□ -0.57
SHROOM4-201ENST00000289292 TIRAPP58753 221 aa11.5□□□□□ -0.57
SHROOM4-201ENST00000289292 PCNX2A6NKB5 2137 aa11.5□□□□□ -0.57
SHROOM4-201ENST00000289292 ZFAND3Q9H8U3 227 aa11.5□□□□□ -0.57
SHROOM4-201ENST00000289292 DAZAP2Q15038 168 aaPredicted RBP11.49□□□□□ -0.57
SHROOM4-201ENST00000289292 DIRC1Q969H9 104 aa11.49□□□□□ -0.57
SHROOM4-201ENST00000289292 PKIGQ9Y2B9 76 aa11.49□□□□□ -0.57
SHROOM4-201ENST00000289292 SPART-AS1P0CW21 52 aa11.49□□□□□ -0.57
SHROOM4-201ENST00000289292 PRR9Q5T870 116 aa11.49□□□□□ -0.57
SHROOM4-201ENST00000289292 NDUFA1O15239 70 aa11.49□□□□□ -0.57
SHROOM4-201ENST00000289292 MP68P56378 58 aa11.49□□□□□ -0.57
SHROOM4-201ENST00000289292 C9orf66Q5T8R8 295 aa11.49□□□□□ -0.57
SHROOM4-201ENST00000289292 SVIPQ8NHG7 77 aa11.49□□□□□ -0.57
SHROOM4-201ENST00000289292 TMEM263Q8WUH6 116 aaKnown RBP11.49□□□□□ -0.57
SHROOM4-201ENST00000289292 HIGD2BQ4VC39 106 aa11.48□□□□□ -0.57
SHROOM4-201ENST00000289292 C10orf99Q6UWK7 81 aa11.48□□□□□ -0.57
SHROOM4-201ENST00000289292 FAM110AQ9BQ89 295 aa11.48□□□□□ -0.57
SHROOM4-201ENST00000289292 C11orf21Q9P2W6 132 aa11.48□□□□□ -0.57
SHROOM4-201ENST00000289292 FAM236DA0A1B0GTK5 79 aa11.48□□□□□ -0.57
SHROOM4-201ENST00000289292 FAM236CP0DP71 79 aa11.48□□□□□ -0.57
SHROOM4-201ENST00000289292 IGF2-ASQ6U949 168 aa11.48□□□□□ -0.57
SHROOM4-201ENST00000289292 ZFAND2AQ8N6M9 145 aa11.48□□□□□ -0.57
SHROOM4-201ENST00000289292 HCFC1P51610 2035 aa11.47□□□□□ -0.57
SHROOM4-201ENST00000289292 NRACQ8N912 160 aa11.47□□□□□ -0.57
SHROOM4-201ENST00000289292 Q6ZS46 218 aa11.47□□□□□ -0.57
SHROOM4-201ENST00000289292 CFAP126Q5VTH2 177 aa11.47□□□□□ -0.57
SHROOM4-201ENST00000289292 PRM2P04554 102 aa11.47□□□□□ -0.57
SHROOM4-201ENST00000289292 MED13LQ71F56 2210 aa11.47□□□□□ -0.57
SHROOM4-201ENST00000289292 F8W735 103 aaPredicted RBP11.46□□□□□ -0.57
SHROOM4-201ENST00000289292 LY6LH3BQJ8 138 aa11.46□□□□□ -0.57
SHROOM4-201ENST00000289292 CHKB-CPT1BH3BT56 60 aa11.46□□□□□ -0.57
SHROOM4-201ENST00000289292 LINC00269Q8N2A0 174 aa11.46□□□□□ -0.57
SHROOM4-201ENST00000289292 C19orf84I3L1E1 186 aa11.46□□□□□ -0.58
SHROOM4-201ENST00000289292 M0QY20 66 aa11.46□□□□□ -0.58
SHROOM4-201ENST00000289292 URB1-AS1Q96HZ7 61 aa11.45□□□□□ -0.58
SHROOM4-201ENST00000289292 SPTSSBQ8NFR3 76 aa11.45□□□□□ -0.58
SHROOM4-201ENST00000289292 LINC00308Q8TCZ7 52 aa11.45□□□□□ -0.58
SHROOM4-201ENST00000289292 LMO4P61968 165 aa11.45□□□□□ -0.58
SHROOM4-201ENST00000289292 NOTCH3Q9UM47 2321 aa11.44□□□□□ -0.58
SHROOM4-201ENST00000289292 TRBV30A0A0K0K1B3 111 aa11.44□□□□□ -0.58
SHROOM4-201ENST00000289292 SPTAN1Q13813 2472 aaKnown RBP11.43□□□□□ -0.58
SHROOM4-201ENST00000289292 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.43□□□□□ -0.58
SHROOM4-201ENST00000289292 NDUFA7O95182 113 aa11.43□□□□□ -0.58
SHROOM4-201ENST00000289292 CEP192Q8TEP8 1941 aa11.43□□□□□ -0.58
SHROOM4-201ENST00000289292 NBASA2RRP1 2371 aa11.43□□□□□ -0.58
SHROOM4-201ENST00000289292 COX7BP24311 80 aa11.42□□□□□ -0.58
SHROOM4-201ENST00000289292 SNURFQ9Y675 71 aa11.42□□□□□ -0.58
SHROOM4-201ENST00000289292 CACNA1HO95180 2353 aa11.41□□□□□ -0.58
SHROOM4-201ENST00000289292 CXCL5P42830 114 aa11.41□□□□□ -0.58
SHROOM4-201ENST00000289292 DCANP1Q8TF63 244 aa11.41□□□□□ -0.58
SHROOM4-201ENST00000289292 K7EQG2 157 aa11.41□□□□□ -0.58
SHROOM4-201ENST00000289292 RNASE3P12724 160 aaKnown RBP11.41□□□□□ -0.58
SHROOM4-201ENST00000289292 J3QKU1 62 aa11.4□□□□□ -0.58
SHROOM4-201ENST00000289292 LINC00694P0DN24 101 aa11.4□□□□□ -0.58
SHROOM4-201ENST00000289292 TSHBP01222 138 aa11.4□□□□□ -0.58
SHROOM4-201ENST00000289292 ZMAT4Q9H898 229 aa11.4□□□□□ -0.58
SHROOM4-201ENST00000289292 ABCA4P78363 2273 aa11.4□□□□□ -0.59
SHROOM4-201ENST00000289292 DNAJC9-AS1A6NH13 148 aa11.39□□□□□ -0.59
SHROOM4-201ENST00000289292 H3BQ85 93 aa11.39□□□□□ -0.59
SHROOM4-201ENST00000289292 REG3AQ06141 175 aa11.39□□□□□ -0.59
SHROOM4-201ENST00000289292 RIF1Q5UIP0 2472 aaKnown RBP11.39□□□□□ -0.59
SHROOM4-201ENST00000289292 TMEM89A2RUT3 159 aa11.38□□□□□ -0.59
SHROOM4-201ENST00000289292 TRBV10-1A0A0K0K1A3 114 aa11.38□□□□□ -0.59
SHROOM4-201ENST00000289292 PTPRSQ13332 1948 aa11.38□□□□□ -0.59
SHROOM4-201ENST00000289292 ODF3Q96PU9 254 aa11.38□□□□□ -0.59
SHROOM4-201ENST00000289292 PRO0255Q9UI72 69 aa11.38□□□□□ -0.59
SHROOM4-201ENST00000289292 UBE2AP49459 152 aa11.37□□□□□ -0.59
SHROOM4-201ENST00000289292 CHCHD10Q8WYQ3 142 aaPredicted RBP11.37□□□□□ -0.59
SHROOM4-201ENST00000289292 BPY2O14599 106 aa11.37□□□□□ -0.59
SHROOM4-201ENST00000289292 UFSP1Q6NVU6 142 aa11.37□□□□□ -0.59
SHROOM4-201ENST00000289292 H7C423 109 aa11.37□□□□□ -0.59
SHROOM4-201ENST00000289292 EDN2P20800 178 aa11.36□□□□□ -0.59
SHROOM4-201ENST00000289292 NDUFC2-KCTD14E9PQ53 114 aa11.36□□□□□ -0.59
SHROOM4-201ENST00000289292 CCL18P55774 89 aa11.36□□□□□ -0.59
SHROOM4-201ENST00000289292 C18orf65Q6ZTR6 163 aa11.36□□□□□ -0.59
SHROOM4-201ENST00000289292 LOC100131303A0A0U1RQF7 123 aa11.36□□□□□ -0.59
SHROOM4-201ENST00000289292 FBXL19-AS1Q494R0 122 aa11.36□□□□□ -0.59
SHROOM4-201ENST00000289292 H0Y9J4 135 aa11.36□□□□□ -0.59
SHROOM4-201ENST00000289292 TNFRSF13BO14836 293 aaPredicted RBP11.36□□□□□ -0.59
SHROOM4-201ENST00000289292 NDUFB1O75438 58 aa11.36□□□□□ -0.59
SHROOM4-201ENST00000289292 M0QXV9 152 aa11.35□□□□□ -0.59
SHROOM4-201ENST00000289292 DEFB114Q30KQ6 69 aa11.34□□□□□ -0.59
SHROOM4-201ENST00000289292 TRBV27A0A0K0K1C4 114 aa11.34□□□□□ -0.59
SHROOM4-201ENST00000289292 Q6ZSV7 163 aa11.34□□□□□ -0.59
SHROOM4-201ENST00000289292 LINC00526Q96FQ7 95 aa11.34□□□□□ -0.59
SHROOM4-201ENST00000289292 PRR14LQ5THK1 2151 aa11.34□□□□□ -0.59
SHROOM4-201ENST00000289292 EML5Q05BV3 1969 aa11.34□□□□□ -0.59
SHROOM4-201ENST00000289292 FAM222AQ5U5X8 452 aa11.33□□□□□ -0.6
SHROOM4-201ENST00000289292 XAGE1AQ9HD64 81 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms