RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 FAM19A3Q7Z5A8 133 aa9.59□□□□□ -0.87
VAMP4-201ENST00000236192 RPL28P46779 137 aaKnown RBP9.59□□□□□ -0.87
VAMP4-201ENST00000236192 TRBV10-3A0A0K0K1G6 114 aa9.58□□□□□ -0.88
VAMP4-201ENST00000236192 BCE1O60756 84 aa9.58□□□□□ -0.88
VAMP4-201ENST00000236192 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.58□□□□□ -0.88
VAMP4-201ENST00000236192 SMIM11BQ8TCY0 68 aa9.58□□□□□ -0.88
VAMP4-201ENST00000236192 DOCK10Q96BY6 2186 aa9.58□□□□□ -0.88
VAMP4-201ENST00000236192 ZFAND3Q9H8U3 227 aa9.57□□□□□ -0.88
VAMP4-201ENST00000236192 HILS1P60008 231 aa9.57□□□□□ -0.88
VAMP4-201ENST00000236192 GPHB5Q86YW7 130 aa9.57□□□□□ -0.88
VAMP4-201ENST00000236192 PLAC8L1A1L4L8 177 aa9.57□□□□□ -0.88
VAMP4-201ENST00000236192 TNFRSF13BO14836 293 aaPredicted RBP9.57□□□□□ -0.88
VAMP4-201ENST00000236192 DEFB131AP59861 70 aa9.57□□□□□ -0.88
VAMP4-201ENST00000236192 ESRGQ1W209 222 aa9.57□□□□□ -0.88
VAMP4-201ENST00000236192 SCXQ7RTU7 201 aa9.57□□□□□ -0.88
VAMP4-201ENST00000236192 ZFAND2AQ8N6M9 145 aa9.57□□□□□ -0.88
VAMP4-201ENST00000236192 ICE1Q9Y2F5 2266 aa9.56□□□□□ -0.88
VAMP4-201ENST00000236192 NOTCH4Q99466 2003 aa9.56□□□□□ -0.88
VAMP4-201ENST00000236192 IGF1P05019 195 aa9.56□□□□□ -0.88
VAMP4-201ENST00000236192 HIGD2BQ4VC39 106 aa9.56□□□□□ -0.88
VAMP4-201ENST00000236192 SMCR5Q8TEV8 140 aa9.56□□□□□ -0.88
VAMP4-201ENST00000236192 SAA4P35542 130 aa9.56□□□□□ -0.88
VAMP4-201ENST00000236192 FAM19A1Q7Z5A9 133 aa9.56□□□□□ -0.88
VAMP4-201ENST00000236192 ABCA1O95477 2261 aa9.56□□□□□ -0.88
VAMP4-201ENST00000236192 CHKB-CPT1BH3BT56 60 aa9.55□□□□□ -0.88
VAMP4-201ENST00000236192 PRYO14603 147 aa9.55□□□□□ -0.88
VAMP4-201ENST00000236192 FHL2Q14192 279 aa9.55□□□□□ -0.88
VAMP4-201ENST00000236192 BPY2O14599 106 aa9.55□□□□□ -0.88
VAMP4-201ENST00000236192 RNASE3P12724 160 aaKnown RBP9.55□□□□□ -0.88
VAMP4-201ENST00000236192 DKK4Q9UBT3 224 aa9.55□□□□□ -0.88
VAMP4-201ENST00000236192 DEFB1P60022 68 aa9.55□□□□□ -0.88
VAMP4-201ENST00000236192 CEP250Q9BV73 2442 aa9.55□□□□□ -0.88
VAMP4-201ENST00000236192 LY6G6EA0A0G2JKS1 128 aa9.54□□□□□ -0.88
VAMP4-201ENST00000236192 LINC00467Q9BRT7 94 aa9.54□□□□□ -0.88
VAMP4-201ENST00000236192 U3KQA8 63 aa9.54□□□□□ -0.88
VAMP4-201ENST00000236192 A0A1W2PRX2 142 aa9.54□□□□□ -0.88
VAMP4-201ENST00000236192 E7EQL1 145 aa9.54□□□□□ -0.88
VAMP4-201ENST00000236192 ZNF561-AS1K7EIQ3 104 aa9.54□□□□□ -0.88
VAMP4-201ENST00000236192 TNCP24821 2201 aa9.54□□□□□ -0.88
VAMP4-201ENST00000236192 LINC01561Q8N1V8 128 aa9.54□□□□□ -0.88
VAMP4-201ENST00000236192 H3BUA1 57 aa9.53□□□□□ -0.88
VAMP4-201ENST00000236192 DEFB124Q8NES8 71 aa9.53□□□□□ -0.88
VAMP4-201ENST00000236192 A0A087WYN8 130 aa9.53□□□□□ -0.88
VAMP4-201ENST00000236192 IBA57-AS1B1ANH7 110 aa9.53□□□□□ -0.88
VAMP4-201ENST00000236192 PRR9Q5T870 116 aa9.53□□□□□ -0.88
VAMP4-201ENST00000236192 TMEM105Q8N8V8 129 aa9.52□□□□□ -0.88
VAMP4-201ENST00000236192 A6NED7 52 aa9.52□□□□□ -0.89
VAMP4-201ENST00000236192 UBE2E2Q96LR5 201 aa9.52□□□□□ -0.89
VAMP4-201ENST00000236192 UBE2D4Q9Y2X8 147 aa9.52□□□□□ -0.89
VAMP4-201ENST00000236192 K7EQD1 137 aa9.52□□□□□ -0.89
VAMP4-201ENST00000236192 MSMPQ1L6U9 139 aa9.52□□□□□ -0.89
VAMP4-201ENST00000236192 TRBV10-1A0A0K0K1A3 114 aa9.51□□□□□ -0.89
VAMP4-201ENST00000236192 ZNF580Q9UK33 172 aa9.51□□□□□ -0.89
VAMP4-201ENST00000236192 TMEM254Q8TBM7 123 aa9.51□□□□□ -0.89
VAMP4-201ENST00000236192 NDUFS5O43920 106 aa9.51□□□□□ -0.89
VAMP4-201ENST00000236192 FREM1Q5H8C1 2179 aa9.5□□□□□ -0.89
VAMP4-201ENST00000236192 PSPHP1O15172 72 aa9.5□□□□□ -0.89
VAMP4-201ENST00000236192 CFHR3Q02985 330 aa9.5□□□□□ -0.89
VAMP4-201ENST00000236192 PCNX2A6NKB5 2137 aa9.5□□□□□ -0.89
VAMP4-201ENST00000236192 LRCOL1A6NCL2 159 aa9.5□□□□□ -0.89
VAMP4-201ENST00000236192 CD164Q04900 197 aa9.5□□□□□ -0.89
VAMP4-201ENST00000236192 NDUFB1O75438 58 aa9.49□□□□□ -0.89
VAMP4-201ENST00000236192 Q8N9W7 124 aa9.49□□□□□ -0.89
VAMP4-201ENST00000236192 Q8N3U1 123 aa9.49□□□□□ -0.89
VAMP4-201ENST00000236192 IGHV4-28A0A0C4DH34 117 aa9.49□□□□□ -0.89
VAMP4-201ENST00000236192 CCDC140Q96MF4 163 aa9.49□□□□□ -0.89
VAMP4-201ENST00000236192 DIRC1Q969H9 104 aa9.48□□□□□ -0.89
VAMP4-201ENST00000236192 PTPRSQ13332 1948 aa9.48□□□□□ -0.89
VAMP4-201ENST00000236192 AMELXQ99217 191 aa9.48□□□□□ -0.89
VAMP4-201ENST00000236192 H3BUX3 64 aa9.47□□□□□ -0.89
VAMP4-201ENST00000236192 WNK2Q9Y3S1 2297 aa9.47□□□□□ -0.89
VAMP4-201ENST00000236192 C2orf16Q68DN1 1984 aa9.47□□□□□ -0.89
VAMP4-201ENST00000236192 CMC4P56277 68 aaPredicted RBP9.46□□□□□ -0.89
VAMP4-201ENST00000236192 C2orf48Q96LS8 159 aa9.46□□□□□ -0.9
VAMP4-201ENST00000236192 NACAE9PAV3 2078 aa9.45□□□□□ -0.9
VAMP4-201ENST00000236192 MUC22E2RYF6 1773 aaPredicted RBP9.45□□□□□ -0.9
VAMP4-201ENST00000236192 NTM-AS1Q6ZSK4 140 aa9.45□□□□□ -0.9
VAMP4-201ENST00000236192 C22orf34Q6ZV56 151 aa9.44□□□□□ -0.9
VAMP4-201ENST00000236192 PLCE1Q9P212 2302 aa9.44□□□□□ -0.9
VAMP4-201ENST00000236192 UNQ9165/PRO28630Q6UXU0 137 aa9.44□□□□□ -0.9
VAMP4-201ENST00000236192 Q8N814 137 aa9.44□□□□□ -0.9
VAMP4-201ENST00000236192 DEFB105AQ8NG35 78 aa9.44□□□□□ -0.9
VAMP4-201ENST00000236192 PLXNB1O43157 2135 aa9.44□□□□□ -0.9
VAMP4-201ENST00000236192 K7EMT4 169 aa9.43□□□□□ -0.9
VAMP4-201ENST00000236192 LY6HO94772 140 aa9.43□□□□□ -0.9
VAMP4-201ENST00000236192 BRD3OSQ6XYD6 125 aa9.43□□□□□ -0.9
VAMP4-201ENST00000236192 LINC01547P58512 204 aaPredicted RBP9.43□□□□□ -0.9
VAMP4-201ENST00000236192 IL17DQ8TAD2 202 aa9.43□□□□□ -0.9
VAMP4-201ENST00000236192 LINC01600Q96MT4 127 aa9.43□□□□□ -0.9
VAMP4-201ENST00000236192 Q8N6K4 173 aa9.43□□□□□ -0.9
VAMP4-201ENST00000236192 COX7BP24311 80 aa9.43□□□□□ -0.9
VAMP4-201ENST00000236192 CXCL6P80162 114 aa9.42□□□□□ -0.9
VAMP4-201ENST00000236192 C6orf99Q4VX62 202 aa9.42□□□□□ -0.9
VAMP4-201ENST00000236192 Q5XG85 94 aa9.42□□□□□ -0.9
VAMP4-201ENST00000236192 CLPSL1A2RUU4 121 aa9.42□□□□□ -0.9
VAMP4-201ENST00000236192 CCL18P55774 89 aa9.41□□□□□ -0.9
VAMP4-201ENST00000236192 CLPSL2Q6UWE3 100 aa9.41□□□□□ -0.9
VAMP4-201ENST00000236192 PRR15LQ9BU68 103 aa9.41□□□□□ -0.9
VAMP4-201ENST00000236192 ADAMTS20P59510 1910 aa9.41□□□□□ -0.9
VAMP4-201ENST00000236192 TMEM89A2RUT3 159 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms