RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Shisa6Q3UH99 525 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Olfr322Q5NCC8 327 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 TbpP29037 316 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Zfp72Q0VFY0 435 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 GalnsQ571E4 520 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 2210407C18RikQ6YI28 220 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Olfr263Q7TQT8 317 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Prr15Q9D1T5 122 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Avpi1Q9D7H4 142 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Cops9Q3U898 57 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Znf474Q6V5K9 347 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Rnase2aQ8K196 155 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Anapc10Q8K2H6 185 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Carhsp1Q9CR86 148 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Trdv2-1A0A0G2JGB9 116 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 E430018J23RikE9PZQ8 461 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Prr23a3Q9CWP9 254 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Zfpl1Q9DB43 310 aa13.41□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Olfr1369-ps1A0A140T8K7 317 aa13.4□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Rnf212F6TQD1 307 aa13.4□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 PgpQ8CHP8 321 aa13.4□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Siglec12Q91Y57 467 aa13.4□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Arid2E9Q7E2 1828 aa13.4□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Igkv4-50A0A0B4J1J0 117 aa13.4□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Gm44973A0A140LJJ1 189 aa13.4□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Nkx2-8O70584 235 aa13.4□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Msrb2Q78J03 175 aa13.4□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Fam168aQ8BGZ2 244 aa13.4□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 AY761184Q9D848 116 aa13.4□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Trbv1A0A0B4J1G7 116 aa13.4□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Olfr918E9PVZ7 325 aa13.4□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Mpv17P19258 176 aa13.4□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Cd200r1lQ6XJV6 249 aa13.4□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Vmn1r54Q9EPB8 315 aa13.4□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 NgfP01139 241 aa13.4□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Defa2P28309 93 aa13.4□□□□□ -0.26
Pcdh1-203ENSMUST00000160721 Zcchc24B2RVL6 241 aaKnown RBP13.39□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Olfr1380Q7TQT5 311 aa13.39□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Gng5Q80SZ7 68 aa13.39□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Gm10190Q8BSD7 107 aa13.39□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Trav3n-3A0A0G2JEM0 114 aa13.39□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Gm14548E9Q1Z6 680 aa13.39□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Cd59aO55186 123 aa13.39□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Tnfrsf9P20334 256 aa13.39□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Lrcol1Q3URS3 161 aa13.39□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Cox19Q8K0C8 92 aa13.39□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Sumo3Q9Z172 110 aa13.39□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Ndufa7Q9Z1P6 113 aaKnown RBP13.39□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Igsf11P0C673 428 aa13.39□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Ighv1-47A0A0A6YY41 117 aa13.39□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Zfp36P22893 319 aaKnown RBP13.39□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Cphx2Q8BX39 182 aa13.39□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Snrnp200Q6P4T2 2136 aaKnown RBP13.39□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 AsmtD3KU66 387 aa13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 P01801 115 aa13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Pax8Q00288 457 aa13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Olfr498Q8VEW2 330 aa13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Olfr491Q8VG06 310 aa13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Gvin1Q80SU7 2427 aa13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Adamts17E9Q4D1 1122 aa13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Wipf3P0C7L0 485 aa13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 MymxQ2Q5T5 84 aa13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Ndufa11Q9D8B4 141 aa13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Prss22Q9ER10 306 aa13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Spred3Q6P6N5 408 aa13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Vmn1r235Q8R297 328 aa13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 ChtopQ9CY57 249 aaKnown RBP13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Fgf16Q9ESL8 207 aa13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 SonQ9QX47 2444 aaKnown RBP13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Dkk2Q9QYZ8 259 aa13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Sptbn1Q62261 2363 aaKnown RBP13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Lcn2P11672 200 aa13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 C1ql4Q4ZJM9 238 aa13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 AgaQ64191 346 aa13.38□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Abca4O35600 2310 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Sc5dO88822 299 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Hs3st3b1Q9QZS6 390 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Akap6E9Q9K8 2307 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Fgf5P15656 264 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 MpzP27573 248 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Oosp2Q4FZG8 168 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 AdipoqQ60994 247 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Rasl11aQ6IMB1 242 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Q9D727 114 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Cacna1iE9Q7P2 2199 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Esp24A8R0V6 68 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Smr2O09133 150 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Hist1h2bfP10853 126 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 HrkP62816 92 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Gm11232Q5SPI8 295 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Zic3Q62521 466 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Hist1h2bbQ64475 126 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Hist1h2bkQ8CGP1 126 aaKnown RBP13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Hist1h2bpQ8CGP2 126 aaKnown RBP13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Q8VC23 124 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Trav7n-5A0A075B604 112 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Trav12d-1A0N8R0 115 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Zg16Q8K0C5 167 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Tmem101Q91VP7 257 aa13.37□□□□□ -0.27
Pcdh1-203ENSMUST00000160721 Sh3bgrl3Q91VW3 93 aa13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms