RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 PKD1P98161 4303 aa13.8□□□□□ -0.2
R3HCC1-210ENST00000625275 S100PP25815 95 aa13.8□□□□□ -0.2
R3HCC1-210ENST00000625275 RAB4BP61018 213 aa13.8□□□□□ -0.2
R3HCC1-210ENST00000625275 TMEM191AQ9H0A3 160 aa13.8□□□□□ -0.2
R3HCC1-210ENST00000625275 F5H697 171 aa13.79□□□□□ -0.2
R3HCC1-210ENST00000625275 H3BNG1 76 aa13.79□□□□□ -0.2
R3HCC1-210ENST00000625275 TRAV9-1A0A075B6T8 112 aa13.78□□□□□ -0.2
R3HCC1-210ENST00000625275 NBDYA0A0U1RRE5 68 aa13.78□□□□□ -0.2
R3HCC1-210ENST00000625275 K7EQD1 137 aa13.78□□□□□ -0.2
R3HCC1-210ENST00000625275 RHOHQ15669 191 aa13.78□□□□□ -0.2
R3HCC1-210ENST00000625275 Q9UF83 564 aa13.78□□□□□ -0.2
R3HCC1-210ENST00000625275 LINC00588Q9Y4M8 146 aa13.78□□□□□ -0.2
R3HCC1-210ENST00000625275 LOC100131303A0A0U1RQF7 123 aa13.77□□□□□ -0.21
R3HCC1-210ENST00000625275 DNAH11Q96DT5 4516 aa13.76□□□□□ -0.21
R3HCC1-210ENST00000625275 ATP6V1G1O75348 118 aa13.76□□□□□ -0.21
R3HCC1-210ENST00000625275 S100A8P05109 93 aa13.76□□□□□ -0.21
R3HCC1-210ENST00000625275 GYPEP15421 78 aa13.76□□□□□ -0.21
R3HCC1-210ENST00000625275 SUMO4Q6EEV6 95 aa13.76□□□□□ -0.21
R3HCC1-210ENST00000625275 AMN1Q8IY45 258 aa13.76□□□□□ -0.21
R3HCC1-210ENST00000625275 GATD1Q8NB37 220 aa13.76□□□□□ -0.21
R3HCC1-210ENST00000625275 PRADC1Q9BSG0 188 aa13.76□□□□□ -0.21
R3HCC1-210ENST00000625275 RNF185Q96GF1 192 aa13.75□□□□□ -0.21
R3HCC1-210ENST00000625275 TRAV26-2A0A0B4J265 109 aa13.74□□□□□ -0.21
R3HCC1-210ENST00000625275 M0QY20 66 aa13.74□□□□□ -0.21
R3HCC1-210ENST00000625275 ELOBQ15370 118 aa13.74□□□□□ -0.21
R3HCC1-210ENST00000625275 CBLN2Q8IUK8 224 aa13.74□□□□□ -0.21
R3HCC1-210ENST00000625275 A0A096LPF7 62 aa13.74□□□□□ -0.21
R3HCC1-210ENST00000625275 RAB4AP20338 218 aa13.74□□□□□ -0.21
R3HCC1-210ENST00000625275 C6orf223Q8N319 242 aa13.74□□□□□ -0.21
R3HCC1-210ENST00000625275 ICOSQ9Y6W8 199 aa13.74□□□□□ -0.21
R3HCC1-210ENST00000625275 DYNC1H1Q14204 4646 aaKnown RBP13.73□□□□□ -0.21
R3HCC1-210ENST00000625275 FAM104BQ5XKR9 115 aa13.73□□□□□ -0.21
R3HCC1-210ENST00000625275 RASL11AQ6T310 242 aa13.73□□□□□ -0.21
R3HCC1-210ENST00000625275 TGIF2-C20orf24A0A0A6YYL0 155 aa13.72□□□□□ -0.21
R3HCC1-210ENST00000625275 TRBV10-1A0A0K0K1A3 114 aa13.72□□□□□ -0.21
R3HCC1-210ENST00000625275 YPEL4Q96NS1 127 aa13.72□□□□□ -0.21
R3HCC1-210ENST00000625275 SMCO4Q9NRQ5 59 aa13.72□□□□□ -0.21
R3HCC1-210ENST00000625275 H7C1H1 209 aa13.71□□□□□ -0.21
R3HCC1-210ENST00000625275 TNP2Q05952 138 aa13.71□□□□□ -0.21
R3HCC1-210ENST00000625275 MRPL23Q16540 153 aaKnown RBP13.71□□□□□ -0.21
R3HCC1-210ENST00000625275 NEXN-AS1Q8NBZ9 246 aa13.71□□□□□ -0.21
R3HCC1-210ENST00000625275 GAGE12JA6NER3 117 aa13.7□□□□□ -0.22
R3HCC1-210ENST00000625275 GAS8-AS1O95177 125 aa13.7□□□□□ -0.22
R3HCC1-210ENST00000625275 LINC00694P0DN24 101 aa13.7□□□□□ -0.22
R3HCC1-210ENST00000625275 S100A1P23297 94 aa13.7□□□□□ -0.22
R3HCC1-210ENST00000625275 SRIP30626 198 aa13.7□□□□□ -0.22
R3HCC1-210ENST00000625275 GAGE1Q13065 139 aa13.7□□□□□ -0.22
R3HCC1-210ENST00000625275 GAGE4Q13068 117 aa13.7□□□□□ -0.22
R3HCC1-210ENST00000625275 GAGE5Q13069 117 aa13.7□□□□□ -0.22
R3HCC1-210ENST00000625275 MRPL51Q4U2R6 128 aaKnown RBP13.7□□□□□ -0.22
R3HCC1-210ENST00000625275 GAGE13Q4V321 117 aa13.7□□□□□ -0.22
R3HCC1-210ENST00000625275 TRBV24-1A0A075B6N3 115 aa13.69□□□□□ -0.22
R3HCC1-210ENST00000625275 TMEM136Q6ZRR5 245 aa13.69□□□□□ -0.22
R3HCC1-210ENST00000625275 FRZBQ92765 325 aa13.69□□□□□ -0.22
R3HCC1-210ENST00000625275 MRAP2Q96G30 205 aa13.69□□□□□ -0.22
R3HCC1-210ENST00000625275 Q9H8V8 135 aa13.69□□□□□ -0.22
R3HCC1-210ENST00000625275 TRBV7-3A0A075B6L6 115 aa13.68□□□□□ -0.22
R3HCC1-210ENST00000625275 RPL36AP83881 106 aaKnown RBP13.68□□□□□ -0.22
R3HCC1-210ENST00000625275 TTC32Q5I0X7 151 aa13.68□□□□□ -0.22
R3HCC1-210ENST00000625275 RPL36ALQ969Q0 106 aaKnown RBP13.68□□□□□ -0.22
R3HCC1-210ENST00000625275 RPL39LQ96EH5 51 aaKnown RBP13.68□□□□□ -0.22
R3HCC1-210ENST00000625275 UPK3BQ9BT76 320 aa13.68□□□□□ -0.22
R3HCC1-210ENST00000625275 SMKR1H3BMG3 65 aa13.67□□□□□ -0.22
R3HCC1-210ENST00000625275 SCO1O75880 301 aa13.67□□□□□ -0.22
R3HCC1-210ENST00000625275 NCR2O95944 276 aa13.67□□□□□ -0.22
R3HCC1-210ENST00000625275 ESRGQ1W209 222 aa13.67□□□□□ -0.22
R3HCC1-210ENST00000625275 NIT2Q9NQR4 276 aa13.67□□□□□ -0.22
R3HCC1-210ENST00000625275 MRPS16Q9Y3D3 137 aaKnown RBP13.67□□□□□ -0.22
R3HCC1-210ENST00000625275 RPS10P46783 165 aaKnown RBP13.67□□□□□ -0.22
R3HCC1-210ENST00000625275 NEGR1Q7Z3B1 354 aa13.67□□□□□ -0.22
R3HCC1-210ENST00000625275 GNB1LQ9BYB4 327 aa13.67□□□□□ -0.22
R3HCC1-210ENST00000625275 UBE2D3P61077 147 aa13.66□□□□□ -0.22
R3HCC1-210ENST00000625275 UBE2D2P62837 147 aa13.66□□□□□ -0.22
R3HCC1-210ENST00000625275 SH2D6Q7Z4S9 175 aa13.66□□□□□ -0.22
R3HCC1-210ENST00000625275 DNAJC30Q96LL9 226 aa13.66□□□□□ -0.22
R3HCC1-210ENST00000625275 KRTAP1-5Q9BYS1 174 aa13.66□□□□□ -0.22
R3HCC1-210ENST00000625275 TNFRSF18Q9Y5U5 241 aa13.66□□□□□ -0.22
R3HCC1-210ENST00000625275 D6R8Y8 96 aa13.65□□□□□ -0.22
R3HCC1-210ENST00000625275 HLA-DQA1P01909 254 aa13.65□□□□□ -0.22
R3HCC1-210ENST00000625275 CKS2P33552 79 aa13.65□□□□□ -0.22
R3HCC1-210ENST00000625275 COX19Q49B96 90 aa13.65□□□□□ -0.22
R3HCC1-210ENST00000625275 ATP6V0E2Q8NHE4 81 aa13.65□□□□□ -0.22
R3HCC1-210ENST00000625275 OR10J3Q5JRS4 329 aa13.64□□□□□ -0.23
R3HCC1-210ENST00000625275 NRACQ8N912 160 aa13.64□□□□□ -0.23
R3HCC1-210ENST00000625275 PCLOQ9Y6V0 5065 aa13.63□□□□□ -0.23
R3HCC1-210ENST00000625275 LYPD5Q6UWN5 251 aa13.63□□□□□ -0.23
R3HCC1-210ENST00000625275 C16orf90A8MZG2 172 aa13.62□□□□□ -0.23
R3HCC1-210ENST00000625275 MT-ND6P03923 174 aa13.62□□□□□ -0.23
R3HCC1-210ENST00000625275 IGHV3-38A0A0C4DH36 116 aa13.61□□□□□ -0.23
R3HCC1-210ENST00000625275 TRBV6-5A0A0K0K1A5 114 aa13.61□□□□□ -0.23
R3HCC1-210ENST00000625275 APCSP02743 223 aa13.61□□□□□ -0.23
R3HCC1-210ENST00000625275 PPBPP02775 128 aa13.61□□□□□ -0.23
R3HCC1-210ENST00000625275 ORMDL3Q8N138 153 aa13.61□□□□□ -0.23
R3HCC1-210ENST00000625275 MRPL18Q9H0U6 180 aaKnown RBP13.61□□□□□ -0.23
R3HCC1-210ENST00000625275 GTSF1LQ9H1H1 148 aa13.61□□□□□ -0.23
R3HCC1-210ENST00000625275 PPP1R17O96001 155 aa13.6□□□□□ -0.23
R3HCC1-210ENST00000625275 NPYP01303 97 aa13.6□□□□□ -0.23
R3HCC1-210ENST00000625275 KIAA1644Q3SXP7 199 aa13.6□□□□□ -0.23
R3HCC1-210ENST00000625275 DAZ4Q86SG3 579 aaKnown RBP13.6□□□□□ -0.23
R3HCC1-210ENST00000625275 ST20Q9HBF5 79 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms