RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 NHLRC4P0CG21 123 aaPredicted RBP12.65□□□□□ -0.38
PTCHD3-202ENST00000622555 ZFP2Q6ZN57 461 aa12.65□□□□□ -0.38
PTCHD3-202ENST00000622555 ZNF664Q8N3J9 261 aa12.65□□□□□ -0.38
PTCHD3-202ENST00000622555 CHCHD1Q96BP2 118 aaKnown RBP12.65□□□□□ -0.38
PTCHD3-202ENST00000622555 TRAV26-2A0A0B4J265 109 aa12.64□□□□□ -0.39
PTCHD3-202ENST00000622555 SCGB1D1O95968 90 aa12.64□□□□□ -0.39
PTCHD3-202ENST00000622555 PMCHP20382 165 aa12.64□□□□□ -0.39
PTCHD3-202ENST00000622555 Q8N976 141 aa12.64□□□□□ -0.39
PTCHD3-202ENST00000622555 C18orf15Q96N68 181 aa12.64□□□□□ -0.39
PTCHD3-202ENST00000622555 D6R8Y8 96 aa12.63□□□□□ -0.39
PTCHD3-202ENST00000622555 SMKR1H3BMG3 65 aa12.63□□□□□ -0.39
PTCHD3-202ENST00000622555 NCR2O95944 276 aa12.63□□□□□ -0.39
PTCHD3-202ENST00000622555 CKS2P33552 79 aa12.63□□□□□ -0.39
PTCHD3-202ENST00000622555 FAM19A2Q8N3H0 131 aa12.63□□□□□ -0.39
PTCHD3-202ENST00000622555 SUMO4Q6EEV6 95 aa12.62□□□□□ -0.39
PTCHD3-202ENST00000622555 TEX43Q6ZNM6 134 aa12.62□□□□□ -0.39
PTCHD3-202ENST00000622555 MRAP2Q96G30 205 aa12.62□□□□□ -0.39
PTCHD3-202ENST00000622555 CIDEAO60543 219 aa12.62□□□□□ -0.39
PTCHD3-202ENST00000622555 HSBP1O75506 76 aa12.62□□□□□ -0.39
PTCHD3-202ENST00000622555 C12orf74Q32Q52 190 aa12.62□□□□□ -0.39
PTCHD3-202ENST00000622555 ORMDL3Q8N138 153 aa12.62□□□□□ -0.39
PTCHD3-202ENST00000622555 TRGV4A0A0C4DH28 118 aa12.61□□□□□ -0.39
PTCHD3-202ENST00000622555 PPBPP02775 128 aa12.61□□□□□ -0.39
PTCHD3-202ENST00000622555 RNASEKQ6P5S7 137 aaKnown RBP12.61□□□□□ -0.39
PTCHD3-202ENST00000622555 Q6ZSN1 163 aa12.61□□□□□ -0.39
PTCHD3-202ENST00000622555 TSTD3H0UI37 97 aa12.6□□□□□ -0.39
PTCHD3-202ENST00000622555 GAS8-AS1O95177 125 aa12.6□□□□□ -0.39
PTCHD3-202ENST00000622555 LINC00614P0C842 121 aa12.6□□□□□ -0.39
PTCHD3-202ENST00000622555 GATA1P15976 413 aaPredicted RBP12.6□□□□□ -0.39
PTCHD3-202ENST00000622555 C11orf45Q8TAV5 145 aa12.6□□□□□ -0.39
PTCHD3-202ENST00000622555 PRELID3AQ96N28 172 aa12.6□□□□□ -0.39
PTCHD3-202ENST00000622555 ATP5G1P05496 136 aa12.59□□□□□ -0.39
PTCHD3-202ENST00000622555 C3orf79P0CE67 100 aa12.59□□□□□ -0.39
PTCHD3-202ENST00000622555 PRO1933Q9H354 126 aa12.59□□□□□ -0.39
PTCHD3-202ENST00000622555 FHL2Q14192 279 aa12.59□□□□□ -0.39
PTCHD3-202ENST00000622555 HUWE1Q7Z6Z7 4374 aaKnown RBP12.58□□□□□ -0.39
PTCHD3-202ENST00000622555 H7C1H1 209 aa12.58□□□□□ -0.4
PTCHD3-202ENST00000622555 M0QY20 66 aa12.58□□□□□ -0.4
PTCHD3-202ENST00000622555 HTN3P15516 51 aa12.58□□□□□ -0.4
PTCHD3-202ENST00000622555 NANOS2P60321 138 aaKnown RBP12.58□□□□□ -0.4
PTCHD3-202ENST00000622555 KRTDAPP60985 99 aa12.58□□□□□ -0.4
PTCHD3-202ENST00000622555 COL7A1Q02388 2944 aa12.58□□□□□ -0.4
PTCHD3-202ENST00000622555 DNAH9Q9NYC9 4486 aa12.58□□□□□ -0.4
PTCHD3-202ENST00000622555 NPYP01303 97 aa12.57□□□□□ -0.4
PTCHD3-202ENST00000622555 RPL39LQ96EH5 51 aaKnown RBP12.57□□□□□ -0.4
PTCHD3-202ENST00000622555 IGHV1-24A0A0C4DH33 117 aa12.57□□□□□ -0.4
PTCHD3-202ENST00000622555 P0DMU3 169 aa12.57□□□□□ -0.4
PTCHD3-202ENST00000622555 FAM231AP0DMU4 169 aa12.57□□□□□ -0.4
PTCHD3-202ENST00000622555 FAM231CP0DMU5 169 aa12.57□□□□□ -0.4
PTCHD3-202ENST00000622555 DDTP30046 118 aa12.57□□□□□ -0.4
PTCHD3-202ENST00000622555 Q6ZTC4 211 aa12.57□□□□□ -0.4
PTCHD3-202ENST00000622555 NRACQ8N912 160 aa12.57□□□□□ -0.4
PTCHD3-202ENST00000622555 PRKDCP78527 4128 aaKnown RBP12.56□□□□□ -0.4
PTCHD3-202ENST00000622555 F5H768 121 aa12.56□□□□□ -0.4
PTCHD3-202ENST00000622555 K7EQD1 137 aa12.56□□□□□ -0.4
PTCHD3-202ENST00000622555 TNFRSF6BO95407 300 aa12.56□□□□□ -0.4
PTCHD3-202ENST00000622555 SLC25A29Q8N8R3 303 aa12.56□□□□□ -0.4
PTCHD3-202ENST00000622555 EDA2RQ9HAV5 297 aa12.56□□□□□ -0.4
PTCHD3-202ENST00000622555 PPP1R17O96001 155 aa12.55□□□□□ -0.4
PTCHD3-202ENST00000622555 HHLA3Q9XRX5 114 aa12.55□□□□□ -0.4
PTCHD3-202ENST00000622555 LAMTOR2Q9Y2Q5 125 aa12.55□□□□□ -0.4
PTCHD3-202ENST00000622555 STAB2Q8WWQ8 2551 aa12.55□□□□□ -0.4
PTCHD3-202ENST00000622555 TRBV6-4A0A1B0GX49 114 aa12.54□□□□□ -0.4
PTCHD3-202ENST00000622555 Q9UF83 564 aa12.54□□□□□ -0.4
PTCHD3-202ENST00000622555 PRO0255Q9UI72 69 aa12.54□□□□□ -0.4
PTCHD3-202ENST00000622555 RHOHQ15669 191 aa12.53□□□□□ -0.4
PTCHD3-202ENST00000622555 NEXN-AS1Q8NBZ9 246 aa12.53□□□□□ -0.4
PTCHD3-202ENST00000622555 PRADC1Q9BSG0 188 aa12.53□□□□□ -0.4
PTCHD3-202ENST00000622555 LOC389332A0A1B0GUA5 103 aa12.52□□□□□ -0.41
PTCHD3-202ENST00000622555 BTF3P20290 206 aaKnown RBP12.52□□□□□ -0.41
PTCHD3-202ENST00000622555 CRYBA4P53673 196 aa12.52□□□□□ -0.41
PTCHD3-202ENST00000622555 MAP1LC3AQ9H492 121 aa12.52□□□□□ -0.41
PTCHD3-202ENST00000622555 ST20Q9HBF5 79 aa12.52□□□□□ -0.41
PTCHD3-202ENST00000622555 AP5S1Q9NUS5 200 aa12.52□□□□□ -0.41
PTCHD3-202ENST00000622555 TNFRSF18Q9Y5U5 241 aa12.52□□□□□ -0.41
PTCHD3-202ENST00000622555 TRBV10-1A0A0K0K1A3 114 aa12.51□□□□□ -0.41
PTCHD3-202ENST00000622555 SUMO2P61956 95 aaKnown RBP12.51□□□□□ -0.41
PTCHD3-202ENST00000622555 PMCHL1Q16048 86 aa12.51□□□□□ -0.41
PTCHD3-202ENST00000622555 PRSS3P2Q8NHM4 247 aa12.51□□□□□ -0.41
PTCHD3-202ENST00000622555 FBN3Q75N90 2809 aa12.51□□□□□ -0.41
PTCHD3-202ENST00000622555 A0A0J9YY99 117 aa12.51□□□□□ -0.41
PTCHD3-202ENST00000622555 TRBV6-5A0A0K0K1A5 114 aa12.51□□□□□ -0.41
PTCHD3-202ENST00000622555 LOC100131303A0A0U1RQF7 123 aa12.51□□□□□ -0.41
PTCHD3-202ENST00000622555 LINC01546A6NGU7 62 aa12.51□□□□□ -0.41
PTCHD3-202ENST00000622555 PAX4O43316 350 aa12.51□□□□□ -0.41
PTCHD3-202ENST00000622555 IFI27P40305 119 aaPredicted RBP12.51□□□□□ -0.41
PTCHD3-202ENST00000622555 FA2HQ7L5A8 372 aa12.51□□□□□ -0.41
PTCHD3-202ENST00000622555 C14orf144Q96I85 54 aa12.51□□□□□ -0.41
PTCHD3-202ENST00000622555 DNAJC30Q96LL9 226 aa12.51□□□□□ -0.41
PTCHD3-202ENST00000622555 C20orf78Q9BR46 151 aa12.51□□□□□ -0.41
PTCHD3-202ENST00000622555 TRAV26-1A0A087WT03 109 aa12.5□□□□□ -0.41
PTCHD3-202ENST00000622555 DEFB131BA0A096LNP1 70 aa12.5□□□□□ -0.41
PTCHD3-202ENST00000622555 LEPROTL1O95214 131 aa12.5□□□□□ -0.41
PTCHD3-202ENST00000622555 TMEM70Q9BUB7 260 aa12.5□□□□□ -0.41
PTCHD3-202ENST00000622555 VAMP8Q9BV40 100 aa12.5□□□□□ -0.41
PTCHD3-202ENST00000622555 GAGE12JA6NER3 117 aa12.49□□□□□ -0.41
PTCHD3-202ENST00000622555 SDHAF1A6NFY7 115 aa12.49□□□□□ -0.41
PTCHD3-202ENST00000622555 RPL36AP83881 106 aaKnown RBP12.49□□□□□ -0.41
PTCHD3-202ENST00000622555 GAGE1Q13065 139 aa12.49□□□□□ -0.41
PTCHD3-202ENST00000622555 GAGE4Q13068 117 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms