RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 U3KQK5 164 aa7.36□□□□□ -1.23
VTA1-205ENST00000620996 IGHV1OR15-1A0A075B7D0 117 aa7.36□□□□□ -1.23
VTA1-205ENST00000620996 SYS1-DBNDD2H3BUS1 97 aa7.36□□□□□ -1.23
VTA1-205ENST00000620996 PF4P02776 101 aa7.36□□□□□ -1.23
VTA1-205ENST00000620996 PRM2P04554 102 aa7.36□□□□□ -1.23
VTA1-205ENST00000620996 C1QTNF4Q9BXJ3 329 aa7.36□□□□□ -1.23
VTA1-205ENST00000620996 SCRT2Q9NQ03 307 aa7.36□□□□□ -1.23
VTA1-205ENST00000620996 TMEM160Q9NX00 188 aa7.36□□□□□ -1.23
VTA1-205ENST00000620996 H3BRM9 83 aa7.35□□□□□ -1.23
VTA1-205ENST00000620996 C2orf91Q6ZV80 131 aa7.35□□□□□ -1.23
VTA1-205ENST00000620996 DPH3P1Q9H4G8 78 aa7.35□□□□□ -1.23
VTA1-205ENST00000620996 OR11H12B2RN74 326 aa7.35□□□□□ -1.23
VTA1-205ENST00000620996 H3BMM0 161 aa7.35□□□□□ -1.23
VTA1-205ENST00000620996 HLA-DRB4P13762 266 aa7.35□□□□□ -1.23
VTA1-205ENST00000620996 SEC11AP67812 179 aa7.35□□□□□ -1.23
VTA1-205ENST00000620996 STHQ8IWL8 128 aa7.35□□□□□ -1.23
VTA1-205ENST00000620996 OR11H2Q8NH07 326 aa7.35□□□□□ -1.23
VTA1-205ENST00000620996 HLA-DRB4X5D2U9 266 aa7.35□□□□□ -1.23
VTA1-205ENST00000620996 NIPBLQ6KC79 2804 aaeCLIP7.35□□□□□ -1.231e-6■■■■■ 35.4
VTA1-205ENST00000620996 FHL3Q13643 280 aa7.34□□□□□ -1.23
VTA1-205ENST00000620996 SFTA2Q6UW10 78 aa7.34□□□□□ -1.23
VTA1-205ENST00000620996 ODF3Q96PU9 254 aa7.34□□□□□ -1.23
VTA1-205ENST00000620996 PPDPFQ9H3Y8 114 aa7.34□□□□□ -1.23
VTA1-205ENST00000620996 XCL2Q9UBD3 114 aa7.34□□□□□ -1.23
VTA1-205ENST00000620996 TNFRSF18Q9Y5U5 241 aa7.34□□□□□ -1.23
VTA1-205ENST00000620996 FN1P02751 2386 aaKnown RBP7.34□□□□□ -1.23
VTA1-205ENST00000620996 NOTCH3Q9UM47 2321 aa7.34□□□□□ -1.23
VTA1-205ENST00000620996 RPL39LQ96EH5 51 aaKnown RBP7.34□□□□□ -1.23
VTA1-205ENST00000620996 LINC01587Q99440 93 aa7.34□□□□□ -1.23
VTA1-205ENST00000620996 SPANXB1Q9NS25 103 aaPredicted RBP7.34□□□□□ -1.23
VTA1-205ENST00000620996 A0A1B0GWB2 263 aa7.33□□□□□ -1.24
VTA1-205ENST00000620996 RBMY1BA6NDE4 496 aaKnown RBP7.33□□□□□ -1.24
VTA1-205ENST00000620996 RBMY1EA6NEQ0 496 aaKnown RBP7.33□□□□□ -1.24
VTA1-205ENST00000620996 HBDP02042 147 aa7.33□□□□□ -1.24
VTA1-205ENST00000620996 RBMY1DP0C7P1 496 aaKnown RBP7.33□□□□□ -1.24
VTA1-205ENST00000620996 NMUP48645 174 aa7.33□□□□□ -1.24
VTA1-205ENST00000620996 PROK1P58294 105 aa7.33□□□□□ -1.24
VTA1-205ENST00000620996 ERG28Q9UKR5 140 aa7.33□□□□□ -1.24
VTA1-205ENST00000620996 JMJD1CQ15652 2540 aa7.33□□□□□ -1.24
VTA1-205ENST00000620996 ZNF56Q15929 161 aa7.33□□□□□ -1.24
VTA1-205ENST00000620996 SPATA25Q9BR10 227 aa7.33□□□□□ -1.24
VTA1-205ENST00000620996 HIVEP1P15822 2718 aa7.33□□□□□ -1.24
VTA1-205ENST00000620996 IGHV4-4A0A075B6R2 117 aa7.33□□□□□ -1.24
VTA1-205ENST00000620996 IGHV3-16A0A0C4DH30 117 aa7.33□□□□□ -1.24
VTA1-205ENST00000620996 NDUFA7O95182 113 aa7.33□□□□□ -1.24
VTA1-205ENST00000620996 PET117Q6UWS5 81 aa7.33□□□□□ -1.24
VTA1-205ENST00000620996 NXT2Q9NPJ8 142 aaKnown RBP7.33□□□□□ -1.24
VTA1-205ENST00000620996 IGHV3-73A0A0B4J1V6 119 aa7.32□□□□□ -1.24
VTA1-205ENST00000620996 PRSS29PA6NIE9 313 aa7.32□□□□□ -1.24
VTA1-205ENST00000620996 CCDC179H3BU77 68 aa7.32□□□□□ -1.24
VTA1-205ENST00000620996 RBMY1A1P0DJD3 496 aaKnown RBP7.32□□□□□ -1.24
VTA1-205ENST00000620996 RBMY1CP0DJD4 496 aa7.32□□□□□ -1.24
VTA1-205ENST00000620996 RBMY1FQ15415 496 aaKnown RBP7.32□□□□□ -1.24
VTA1-205ENST00000620996 ODF3L2Q3SX64 289 aa7.32□□□□□ -1.24
VTA1-205ENST00000620996 WFDC10AQ9H1F0 79 aa7.32□□□□□ -1.24
VTA1-205ENST00000620996 C2CD3Q4AC94 2353 aa7.32□□□□□ -1.24
VTA1-205ENST00000620996 TRGV11A0A075B6L2 103 aa7.32□□□□□ -1.24
VTA1-205ENST00000620996 MED14OSP0DP75 135 aa7.32□□□□□ -1.24
VTA1-205ENST00000620996 ZNF876PQ49A33 203 aa7.32□□□□□ -1.24
VTA1-205ENST00000620996 ZNF256Q9Y2P7 627 aaPredicted RBP7.32□□□□□ -1.24
VTA1-205ENST00000620996 RPL35AP18077 110 aaKnown RBP7.32□□□□□ -1.24
VTA1-205ENST00000620996 XGP55808 180 aa7.32□□□□□ -1.24
VTA1-205ENST00000620996 TMEM158Q8WZ71 300 aa7.32□□□□□ -1.24
VTA1-205ENST00000620996 NHP2Q9NX24 153 aaKnown RBP7.32□□□□□ -1.24
VTA1-205ENST00000620996 TRAV2A0A0B4J234 112 aa7.31□□□□□ -1.24
VTA1-205ENST00000620996 INSP01308 110 aa7.31□□□□□ -1.24
VTA1-205ENST00000620996 NRACQ8N912 160 aa7.31□□□□□ -1.24
VTA1-205ENST00000620996 ZNF747Q9BV97 191 aa7.31□□□□□ -1.24
VTA1-205ENST00000620996 CYSLTR1Q9Y271 337 aa7.31□□□□□ -1.24
VTA1-205ENST00000620996 KRTAP10-3P60369 221 aa7.31□□□□□ -1.24
VTA1-205ENST00000620996 Q8N8P6 123 aa7.31□□□□□ -1.24
VTA1-205ENST00000620996 TTTY13Q9BZ97 58 aa7.31□□□□□ -1.24
VTA1-205ENST00000620996 NSD1Q96L73 2696 aaPredicted RBP7.31□□□□□ -1.24
VTA1-205ENST00000620996 A0A096LNJ9 63 aa7.3□□□□□ -1.24
VTA1-205ENST00000620996 CRXO43186 299 aaPredicted RBP7.3□□□□□ -1.24
VTA1-205ENST00000620996 APOMO95445 188 aa7.3□□□□□ -1.24
VTA1-205ENST00000620996 SMIM13P0DJ93 91 aa7.3□□□□□ -1.24
VTA1-205ENST00000620996 COX8AP10176 69 aa7.3□□□□□ -1.24
VTA1-205ENST00000620996 TRAV25A0A0B4J276 109 aa7.3□□□□□ -1.24
VTA1-205ENST00000620996 PRSS1P07477 247 aa7.3□□□□□ -1.24
VTA1-205ENST00000620996 SUMO2P61956 95 aaKnown RBP7.3□□□□□ -1.24
VTA1-205ENST00000620996 RASL10AQ92737 203 aa7.3□□□□□ -1.24
VTA1-205ENST00000620996 IFI27L1Q96BM0 104 aa7.3□□□□□ -1.24
VTA1-205ENST00000620996 KIR2DL4Q99706 377 aa7.3□□□□□ -1.24
VTA1-205ENST00000620996 LAGE3Q14657 143 aa7.3□□□□□ -1.24
VTA1-205ENST00000620996 SUMO4Q6EEV6 95 aa7.3□□□□□ -1.24
VTA1-205ENST00000620996 MUC4Q99102 2169 aa7.29□□□□□ -1.24
VTA1-205ENST00000620996 ADARB2-AS1A8MUL3 147 aa7.29□□□□□ -1.24
VTA1-205ENST00000620996 FCER1GP30273 86 aa7.29□□□□□ -1.24
VTA1-205ENST00000620996 PCP2Q8IVA1 136 aa7.29□□□□□ -1.24
VTA1-205ENST00000620996 SMIM2Q9BVW6 85 aa7.29□□□□□ -1.24
VTA1-205ENST00000620996 MRPL23Q16540 153 aaKnown RBP7.29□□□□□ -1.24
VTA1-205ENST00000620996 C9orf85Q96MD7 179 aa7.29□□□□□ -1.24
VTA1-205ENST00000620996 FXYD2P54710 66 aa7.28□□□□□ -1.24
VTA1-205ENST00000620996 NDUFA11Q86Y39 141 aa7.28□□□□□ -1.24
VTA1-205ENST00000620996 A4D1N5 150 aa7.28□□□□□ -1.24
VTA1-205ENST00000620996 Q6ZUT4 128 aa7.28□□□□□ -1.24
VTA1-205ENST00000620996 PTH2Q96A98 100 aa7.28□□□□□ -1.24
VTA1-205ENST00000620996 CRLF1O75462 422 aa7.28□□□□□ -1.24
VTA1-205ENST00000620996 ZNF415Q09FC8 603 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms