RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 NDPQ00604 133 aa3.52□□□□□ -1.85
HDDC2-208ENST00000609021 IGFL3Q6UXB1 125 aa3.52□□□□□ -1.85
HDDC2-208ENST00000609021 C7orf69Q9H7B7 122 aa3.52□□□□□ -1.85
HDDC2-208ENST00000609021 APC2O95996 2303 aa3.51□□□□□ -1.85
HDDC2-208ENST00000609021 IGKV1-6A0A0C4DH72 117 aa3.51□□□□□ -1.85
HDDC2-208ENST00000609021 IBA57-AS1B1ANH7 110 aa3.51□□□□□ -1.85
HDDC2-208ENST00000609021 BUB1B-PAK6H3BSN5 160 aa3.51□□□□□ -1.85
HDDC2-208ENST00000609021 Q86TA4 180 aa3.51□□□□□ -1.85
HDDC2-208ENST00000609021 DIRC1Q969H9 104 aa3.51□□□□□ -1.85
HDDC2-208ENST00000609021 ZFAND3Q9H8U3 227 aa3.51□□□□□ -1.85
HDDC2-208ENST00000609021 ZNF71Q9NQZ8 489 aaPredicted RBP3.51□□□□□ -1.85
HDDC2-208ENST00000609021 LINC00846Q9NV44 126 aa3.51□□□□□ -1.85
HDDC2-208ENST00000609021 C17orf98A8MV24 154 aa3.51□□□□□ -1.85
HDDC2-208ENST00000609021 RPL28P46779 137 aaKnown RBP3.51□□□□□ -1.85
HDDC2-208ENST00000609021 LINC01554Q52M75 96 aa3.51□□□□□ -1.85
HDDC2-208ENST00000609021 C14orf132Q9NPU4 83 aa3.51□□□□□ -1.85
HDDC2-208ENST00000609021 NDUFA12Q9UI09 145 aa3.51□□□□□ -1.85
HDDC2-208ENST00000609021 LINC01565O15544 149 aa3.5□□□□□ -1.85
HDDC2-208ENST00000609021 URB1O60287 2271 aaKnown RBP3.5□□□□□ -1.85
HDDC2-208ENST00000609021 CD28P10747 220 aa3.5□□□□□ -1.85
HDDC2-208ENST00000609021 Q0VFX4 171 aa3.5□□□□□ -1.85
HDDC2-208ENST00000609021 C10orf128Q5T292 105 aa3.5□□□□□ -1.85
HDDC2-208ENST00000609021 SORL1Q92673 2214 aa3.5□□□□□ -1.85
HDDC2-208ENST00000609021 IGKV1D-17A0A075B6S4 117 aa3.5□□□□□ -1.85
HDDC2-208ENST00000609021 IGLV3-32A0A0A0MS00 114 aa3.5□□□□□ -1.85
HDDC2-208ENST00000609021 ADAMTSL4-AS1Q5T5F5 129 aa3.5□□□□□ -1.85
HDDC2-208ENST00000609021 VPS13CQ709C8 3753 aa3.5□□□□□ -1.85
HDDC2-208ENST00000609021 USF3Q68DE3 2245 aa3.5□□□□□ -1.85
HDDC2-208ENST00000609021 SDK2Q58EX2 2172 aa3.5□□□□□ -1.85
HDDC2-208ENST00000609021 ADAMTS9Q9P2N4 1935 aa3.5□□□□□ -1.85
HDDC2-208ENST00000609021 CNOT1A5YKK6 2376 aaKnown RBP3.5□□□□□ -1.85
HDDC2-208ENST00000609021 A6NED7 52 aa3.5□□□□□ -1.85
HDDC2-208ENST00000609021 HCG22E2RYF7 251 aa3.5□□□□□ -1.85
HDDC2-208ENST00000609021 PSPNO60542 156 aa3.5□□□□□ -1.85
HDDC2-208ENST00000609021 Q1T7F1 81 aa3.5□□□□□ -1.85
HDDC2-208ENST00000609021 C14orf178Q8N769 122 aaPredicted RBP3.5□□□□□ -1.85
HDDC2-208ENST00000609021 WFDC9Q8NEX5 89 aa3.5□□□□□ -1.85
HDDC2-208ENST00000609021 IGKV1-8A0A0C4DH67 115 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 IGKV1-12A0A0C4DH73 117 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 IGKV1D-12P01611 117 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 PRM2P04554 102 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 COX6B1P14854 86 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 NANOS2P60321 138 aaKnown RBP3.49□□□□□ -1.85
HDDC2-208ENST00000609021 FAM229BQ4G0N7 80 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 C6orf99Q4VX62 202 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 LCE2CQ5TA81 110 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 C2orf66Q6UXQ4 117 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 ZNF625Q96I27 306 aaPredicted RBP3.49□□□□□ -1.85
HDDC2-208ENST00000609021 CTSZQ9UBR2 303 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 TRBV10-3A0A0K0K1G6 114 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 ERHP84090 104 aaKnown RBP3.49□□□□□ -1.85
HDDC2-208ENST00000609021 GPHB5Q86YW7 130 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 CEP250Q9BV73 2442 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 E7EQL1 145 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 HAMPP81172 84 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 C15orf32Q32M92 178 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 CRIP3Q6Q6R5 217 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 VMO1Q7Z5L0 202 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 FDCSPQ8NFU4 85 aa3.49□□□□□ -1.85
HDDC2-208ENST00000609021 IGHV3OR16-10A0A075B7F0 116 aa3.48□□□□□ -1.85
HDDC2-208ENST00000609021 C11orf86A6NJI1 115 aa3.48□□□□□ -1.85
HDDC2-208ENST00000609021 F5H697 171 aa3.48□□□□□ -1.85
HDDC2-208ENST00000609021 LINC00313P59037 77 aa3.48□□□□□ -1.85
HDDC2-208ENST00000609021 SYCNQ0VAF6 134 aa3.48□□□□□ -1.85
HDDC2-208ENST00000609021 TMEM254Q8TBM7 123 aa3.48□□□□□ -1.85
HDDC2-208ENST00000609021 FAM167A-AS1Q96KT0 104 aa3.48□□□□□ -1.85
HDDC2-208ENST00000609021 MUC6Q6W4X9 2439 aa3.48□□□□□ -1.85
HDDC2-208ENST00000609021 IGHV3-64A0A075B6Q5 118 aa3.48□□□□□ -1.85
HDDC2-208ENST00000609021 IGHV1OR15-1A0A075B7D0 117 aa3.48□□□□□ -1.85
HDDC2-208ENST00000609021 TRBV6-6A0A0A6YYG2 114 aa3.48□□□□□ -1.85
HDDC2-208ENST00000609021 TRAV22A0A0B4J277 110 aa3.48□□□□□ -1.85
HDDC2-208ENST00000609021 SDHAF1A6NFY7 115 aa3.48□□□□□ -1.85
HDDC2-208ENST00000609021 LINC01356Q8N9X3 169 aa3.48□□□□□ -1.85
HDDC2-208ENST00000609021 CACNA1BQ00975 2339 aa3.48□□□□□ -1.85
HDDC2-208ENST00000609021 IGKV1-27A0A075B6S5 117 aa3.48□□□□□ -1.85
HDDC2-208ENST00000609021 LEPROTO15243 131 aa3.48□□□□□ -1.85
HDDC2-208ENST00000609021 PIK3CD-AS1Q5SR53 167 aa3.48□□□□□ -1.85
HDDC2-208ENST00000609021 TRGV8A0A0C4DH27 118 aa3.47□□□□□ -1.85
HDDC2-208ENST00000609021 IGKV1-16P04430 117 aa3.47□□□□□ -1.85
HDDC2-208ENST00000609021 SPANXN1Q5VSR9 72 aa3.47□□□□□ -1.85
HDDC2-208ENST00000609021 PCNX2A6NKB5 2137 aa3.47□□□□□ -1.85
HDDC2-208ENST00000609021 IGHV1-69DA0A0B4J2H0 117 aa3.47□□□□□ -1.85
HDDC2-208ENST00000609021 H0Y9J4 135 aa3.47□□□□□ -1.85
HDDC2-208ENST00000609021 RNASE13Q5GAN3 156 aaKnown RBP3.47□□□□□ -1.85
HDDC2-208ENST00000609021 SMIM2Q9BVW6 85 aa3.47□□□□□ -1.85
HDDC2-208ENST00000609021 MYO18BQ8IUG5 2567 aa3.47□□□□□ -1.85
HDDC2-208ENST00000609021 PRYO14603 147 aa3.47□□□□□ -1.85
HDDC2-208ENST00000609021 ZNHIT1O43257 154 aa3.47□□□□□ -1.85
HDDC2-208ENST00000609021 REG3AQ06141 175 aa3.47□□□□□ -1.85
HDDC2-208ENST00000609021 SCXQ7RTU7 201 aa3.47□□□□□ -1.85
HDDC2-208ENST00000609021 Q6ZPA2 131 aa3.46□□□□□ -1.86
HDDC2-208ENST00000609021 Q9HAA7 133 aa3.46□□□□□ -1.86
HDDC2-208ENST00000609021 TMEM14BQ9NUH8 114 aa3.46□□□□□ -1.86
HDDC2-208ENST00000609021 ZNF407Q9C0G0 2248 aa3.46□□□□□ -1.86
HDDC2-208ENST00000609021 ATRXP46100 2492 aa3.46□□□□□ -1.86
HDDC2-208ENST00000609021 NBPF19A0A087WUL8 3843 aa3.46□□□□□ -1.86
HDDC2-208ENST00000609021 LINC01546A6NGU7 62 aa3.46□□□□□ -1.86
HDDC2-208ENST00000609021 PPP1R17O96001 155 aa3.46□□□□□ -1.86
HDDC2-208ENST00000609021 IGLV3-1P01715 115 aa3.46□□□□□ -1.86
HDDC2-208ENST00000609021 P0C879 139 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms