RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 FAM231BA6NCW3 169 aa11.07□□□□□ -0.64
SHKBP1-215ENST00000597649 RS1O15537 224 aa11.07□□□□□ -0.64
SHKBP1-215ENST00000597649 MRPL23Q16540 153 aaKnown RBP11.07□□□□□ -0.64
SHKBP1-215ENST00000597649 Q6ZSN1 163 aa11.07□□□□□ -0.64
SHKBP1-215ENST00000597649 ANAPC16Q96DE5 110 aa11.07□□□□□ -0.64
SHKBP1-215ENST00000597649 PGLYRP4Q96LB8 373 aa11.07□□□□□ -0.64
SHKBP1-215ENST00000597649 CIDEAO60543 219 aa11.06□□□□□ -0.64
SHKBP1-215ENST00000597649 C10orf91Q5T1B1 145 aa11.06□□□□□ -0.64
SHKBP1-215ENST00000597649 CFAP126Q5VTH2 177 aa11.06□□□□□ -0.64
SHKBP1-215ENST00000597649 NEGR1Q7Z3B1 354 aa11.06□□□□□ -0.64
SHKBP1-215ENST00000597649 GTSF1Q8WW33 167 aa11.06□□□□□ -0.64
SHKBP1-215ENST00000597649 ZNF479Q96JC4 524 aa11.06□□□□□ -0.64
SHKBP1-215ENST00000597649 FAM30AQ9NZY2 134 aa11.06□□□□□ -0.64
SHKBP1-215ENST00000597649 CARHSP1Q9Y2V2 147 aaKnown RBP11.06□□□□□ -0.64
SHKBP1-215ENST00000597649 LRCOL1A6NCL2 159 aa11.05□□□□□ -0.64
SHKBP1-215ENST00000597649 HIGD1CA8MV81 97 aa11.05□□□□□ -0.64
SHKBP1-215ENST00000597649 J3QL48 77 aa11.05□□□□□ -0.64
SHKBP1-215ENST00000597649 APOC3P02656 99 aa11.05□□□□□ -0.64
SHKBP1-215ENST00000597649 CTRLP40313 264 aa11.05□□□□□ -0.64
SHKBP1-215ENST00000597649 SLAQ13239 276 aa11.05□□□□□ -0.64
SHKBP1-215ENST00000597649 TWIST1Q15672 202 aa11.05□□□□□ -0.64
SHKBP1-215ENST00000597649 WDR73Q6P4I2 378 aa11.05□□□□□ -0.64
SHKBP1-215ENST00000597649 NAT8BQ9UHF3 227 aa11.05□□□□□ -0.64
SHKBP1-215ENST00000597649 IGHV3-73A0A0B4J1V6 119 aa11.04□□□□□ -0.64
SHKBP1-215ENST00000597649 K7EQD1 137 aa11.04□□□□□ -0.64
SHKBP1-215ENST00000597649 SMIM17P0DL12 118 aa11.04□□□□□ -0.64
SHKBP1-215ENST00000597649 NTF3P20783 257 aa11.04□□□□□ -0.64
SHKBP1-215ENST00000597649 FOXA3P55318 350 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-215ENST00000597649 FAM74A4Q5TZK3 123 aa11.04□□□□□ -0.64
SHKBP1-215ENST00000597649 AP1S3Q96PC3 154 aa11.04□□□□□ -0.64
SHKBP1-215ENST00000597649 JPT2Q9H910 190 aa11.04□□□□□ -0.64
SHKBP1-215ENST00000597649 A0A087WWL8 130 aa11.03□□□□□ -0.64
SHKBP1-215ENST00000597649 SMIM27A0A1W2PRY6 76 aa11.03□□□□□ -0.64
SHKBP1-215ENST00000597649 RHODO00212 210 aa11.03□□□□□ -0.64
SHKBP1-215ENST00000597649 TRGC1P0CF51 173 aa11.03□□□□□ -0.64
SHKBP1-215ENST00000597649 EVI2AP22794 236 aa11.03□□□□□ -0.64
SHKBP1-215ENST00000597649 SMIM15Q7Z3B0 74 aa11.03□□□□□ -0.64
SHKBP1-215ENST00000597649 TMEM70Q9BUB7 260 aa11.03□□□□□ -0.64
SHKBP1-215ENST00000597649 CTDSP1Q9GZU7 261 aa11.03□□□□□ -0.64
SHKBP1-215ENST00000597649 IGLV5-52A0A0A0MRZ9 124 aa11.02□□□□□ -0.65
SHKBP1-215ENST00000597649 A0A1B0GUT8 65 aa11.02□□□□□ -0.65
SHKBP1-215ENST00000597649 K7EP13 123 aa11.02□□□□□ -0.65
SHKBP1-215ENST00000597649 RIGQ13278 110 aa11.02□□□□□ -0.65
SHKBP1-215ENST00000597649 ZFP2Q6ZN57 461 aa11.02□□□□□ -0.65
SHKBP1-215ENST00000597649 SVBPQ8N300 66 aa11.02□□□□□ -0.65
SHKBP1-215ENST00000597649 C14orf178Q8N769 122 aaPredicted RBP11.02□□□□□ -0.65
SHKBP1-215ENST00000597649 CLRN3Q8NCR9 226 aa11.02□□□□□ -0.65
SHKBP1-215ENST00000597649 NUP35Q8NFH5 326 aa11.02□□□□□ -0.65
SHKBP1-215ENST00000597649 SAMD10Q9BYL1 202 aa11.02□□□□□ -0.65
SHKBP1-215ENST00000597649 SNAPINO95295 136 aa11.01□□□□□ -0.65
SHKBP1-215ENST00000597649 CRYGDP07320 174 aa11.01□□□□□ -0.65
SHKBP1-215ENST00000597649 GYPEP15421 78 aa11.01□□□□□ -0.65
SHKBP1-215ENST00000597649 CNFNQ9BYD5 112 aa11.01□□□□□ -0.65
SHKBP1-215ENST00000597649 RPS10P5Q9NQ39 176 aa11.01□□□□□ -0.65
SHKBP1-215ENST00000597649 C7orf77A4D0Y5 90 aa11□□□□□ -0.65
SHKBP1-215ENST00000597649 F5H697 171 aa11□□□□□ -0.65
SHKBP1-215ENST00000597649 SRIP30626 198 aa11□□□□□ -0.65
SHKBP1-215ENST00000597649 RHEBQ15382 184 aa11□□□□□ -0.65
SHKBP1-215ENST00000597649 KRTAP29-1A8MX34 341 aaPredicted RBP10.99□□□□□ -0.65
SHKBP1-215ENST00000597649 MGPP08493 103 aa10.99□□□□□ -0.65
SHKBP1-215ENST00000597649 ZNF56Q15929 161 aa10.99□□□□□ -0.65
SHKBP1-215ENST00000597649 KCNIP4Q6PIL6 250 aa10.99□□□□□ -0.65
SHKBP1-215ENST00000597649 PRADC1Q9BSG0 188 aa10.99□□□□□ -0.65
SHKBP1-215ENST00000597649 GATA1P15976 413 aaPredicted RBP10.98□□□□□ -0.65
SHKBP1-215ENST00000597649 NTN5Q8WTR8 489 aaPredicted RBP10.98□□□□□ -0.65
SHKBP1-215ENST00000597649 DPH3P1Q9H4G8 78 aa10.98□□□□□ -0.65
SHKBP1-215ENST00000597649 A0A087WWC5 75 aa10.97□□□□□ -0.65
SHKBP1-215ENST00000597649 LOC100131303A0A0U1RQF7 123 aa10.97□□□□□ -0.65
SHKBP1-215ENST00000597649 TRBV6-4A0A1B0GX49 114 aa10.97□□□□□ -0.65
SHKBP1-215ENST00000597649 S100PP25815 95 aa10.97□□□□□ -0.65
SHKBP1-215ENST00000597649 RHOHQ15669 191 aa10.97□□□□□ -0.65
SHKBP1-215ENST00000597649 UFSP1Q6NVU6 142 aa10.97□□□□□ -0.65
SHKBP1-215ENST00000597649 Q8N814 137 aa10.97□□□□□ -0.65
SHKBP1-215ENST00000597649 SLC25A29Q8N8R3 303 aa10.97□□□□□ -0.65
SHKBP1-215ENST00000597649 IMMP2LQ96T52 175 aa10.97□□□□□ -0.65
SHKBP1-215ENST00000597649 TMEM242Q9NWH2 141 aa10.97□□□□□ -0.65
SHKBP1-215ENST00000597649 A0A1B0GW15 77 aa10.96□□□□□ -0.65
SHKBP1-215ENST00000597649 S100A8P05109 93 aa10.96□□□□□ -0.65
SHKBP1-215ENST00000597649 RAB4BP61018 213 aa10.96□□□□□ -0.65
SHKBP1-215ENST00000597649 MRPL54Q6P161 138 aaKnown RBP10.96□□□□□ -0.65
SHKBP1-215ENST00000597649 C10orf126Q8N4M7 172 aa10.96□□□□□ -0.65
SHKBP1-215ENST00000597649 PKHD1L1Q86WI1 4243 aa10.95□□□□□ -0.66
SHKBP1-215ENST00000597649 PSCAO43653 123 aa10.95□□□□□ -0.66
SHKBP1-215ENST00000597649 CAMPP49913 170 aa10.95□□□□□ -0.66
SHKBP1-215ENST00000597649 KIF25-AS1Q9Y6Z4 181 aa10.95□□□□□ -0.66
SHKBP1-215ENST00000597649 IBA57-AS1B1ANH7 110 aa10.94□□□□□ -0.66
SHKBP1-215ENST00000597649 HBBP68871 147 aa10.94□□□□□ -0.66
SHKBP1-215ENST00000597649 BTF3L4Q96K17 158 aa10.94□□□□□ -0.66
SHKBP1-215ENST00000597649 TMEM191AQ9H0A3 160 aa10.94□□□□□ -0.66
SHKBP1-215ENST00000597649 IGHV3-38A0A0C4DH36 116 aa10.93□□□□□ -0.66
SHKBP1-215ENST00000597649 H7C1H1 209 aa10.93□□□□□ -0.66
SHKBP1-215ENST00000597649 ATP5L2Q7Z4Y8 100 aa10.93□□□□□ -0.66
SHKBP1-215ENST00000597649 TIRAPP58753 221 aa10.92□□□□□ -0.66
SHKBP1-215ENST00000597649 WFDC2Q14508 124 aa10.92□□□□□ -0.66
SHKBP1-215ENST00000597649 LINC01556Q5JQF7 62 aa10.92□□□□□ -0.66
SHKBP1-215ENST00000597649 Q6ZSA8 131 aa10.92□□□□□ -0.66
SHKBP1-215ENST00000597649 LINC00528Q8N1L1 170 aa10.92□□□□□ -0.66
SHKBP1-215ENST00000597649 Q9HAA7 133 aa10.92□□□□□ -0.66
SHKBP1-215ENST00000597649 URGCP-MRPS24S4R325 110 aa10.92□□□□□ -0.66
SHKBP1-215ENST00000597649 TRAV9-1A0A075B6T8 112 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms