RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 IQCJQ1A5X6 159 aa-0.38□□□□□ -2.47
SKA2-210ENST00000584089 PPP1R2P3Q6NXS1 205 aa-0.38□□□□□ -2.47
SKA2-210ENST00000584089 TMEM91Q6ZNR0 172 aa-0.38□□□□□ -2.47
SKA2-210ENST00000584089 ATP11AUNQ6ZP68 121 aa-0.38□□□□□ -2.47
SKA2-210ENST00000584089 TEX29Q8N6K0 151 aa-0.38□□□□□ -2.47
SKA2-210ENST00000584089 MAFIPQ8WZ33 124 aa-0.38□□□□□ -2.47
SKA2-210ENST00000584089 CENPHQ9H3R5 247 aa-0.38□□□□□ -2.47
SKA2-210ENST00000584089 ADGRB1O14514 1584 aa-0.38□□□□□ -2.47
SKA2-210ENST00000584089 MUC22E2RYF6 1773 aaPredicted RBP-0.38□□□□□ -2.47
SKA2-210ENST00000584089 DOPEY1Q5JWR5 2465 aa-0.38□□□□□ -2.47
SKA2-210ENST00000584089 LAMA5O15230 3695 aa-0.38□□□□□ -2.47
SKA2-210ENST00000584089 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.38□□□□□ -2.47
SKA2-210ENST00000584089 LRP6O75581 1613 aa-0.38□□□□□ -2.47
SKA2-210ENST00000584089 C10orf71Q711Q0 1435 aa-0.38□□□□□ -2.47
SKA2-210ENST00000584089 FLGP20930 4061 aaPredicted RBP-0.38□□□□□ -2.47
SKA2-210ENST00000584089 PRKDCP78527 4128 aaKnown RBP-0.39□□□□□ -2.47
SKA2-210ENST00000584089 IQSEC2Q5JU85 1478 aa-0.39□□□□□ -2.47
SKA2-210ENST00000584089 WDR7Q9Y4E6 1490 aa-0.39□□□□□ -2.47
SKA2-210ENST00000584089 TRGV1A0A0A0MS02 117 aa-0.39□□□□□ -2.47
SKA2-210ENST00000584089 DPM2O94777 84 aa-0.39□□□□□ -2.47
SKA2-210ENST00000584089 IFNA17P01571 189 aa-0.39□□□□□ -2.47
SKA2-210ENST00000584089 SLC25A5P05141 298 aaKnown RBP-0.39□□□□□ -2.47
SKA2-210ENST00000584089 SLC25A6P12236 298 aa-0.39□□□□□ -2.47
SKA2-210ENST00000584089 HLA-DRB4P13762 266 aa-0.39□□□□□ -2.47
SKA2-210ENST00000584089 S100A3P33764 101 aa-0.39□□□□□ -2.47
SKA2-210ENST00000584089 TFAMQ00059 246 aaKnown RBP-0.39□□□□□ -2.47
SKA2-210ENST00000584089 TRIQKQ629K1 86 aa-0.39□□□□□ -2.47
SKA2-210ENST00000584089 IFI27L1Q96BM0 104 aa-0.39□□□□□ -2.47
SKA2-210ENST00000584089 WFDC6Q9BQY6 131 aa-0.39□□□□□ -2.47
SKA2-210ENST00000584089 SPANXA1Q9NS26 97 aa-0.39□□□□□ -2.47
SKA2-210ENST00000584089 NOP16Q9Y3C1 178 aaKnown RBP-0.39□□□□□ -2.47
SKA2-210ENST00000584089 HLA-DRB4X5D2U9 266 aa-0.39□□□□□ -2.47
SKA2-210ENST00000584089 SPG11Q96JI7 2443 aa-0.39□□□□□ -2.47
SKA2-210ENST00000584089 KDM5AP29375 1690 aaKnown RBP-0.4□□□□□ -2.47
SKA2-210ENST00000584089 PBRM1Q86U86 1689 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 BICRAQ9NZM4 1560 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 MYH6P13533 1939 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 IBTKQ9P2D0 1353 aaPredicted RBP-0.4□□□□□ -2.47
SKA2-210ENST00000584089 TRAV12-3A0A0B4J271 114 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 A0A1B0GX51 115 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 K7EQZ3 153 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 APOC4-APOC2K7ER74 178 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 SMIM24O75264 130 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 TCRAP04437 139 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 SCTP09683 121 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 SMIM6P0DI80 62 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 EDDM3BP56851 147 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 NPC2P61916 151 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 BASP1P80723 227 aaKnown RBP-0.4□□□□□ -2.47
SKA2-210ENST00000584089 DCDP81605 110 aaKnown RBP-0.4□□□□□ -2.47
SKA2-210ENST00000584089 KRTAP19-8Q3LI54 63 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 SPANXN1Q5VSR9 72 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 HRCT1Q6UXD1 115 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 ZNF818PQ6ZRF7 136 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 BAGE3Q86Y29 109 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 SNX29P2Q8IUI4 249 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 OR8I2Q8N0Y5 310 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 C20orf197Q8N268 126 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 SKA2Q8WVK7 121 aaPredicted RBP-0.4□□□□□ -2.47
SKA2-210ENST00000584089 SMPXQ9UHP9 88 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 DNAJC15Q9Y5T4 150 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 HERC1Q15751 4861 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 ZMYM4Q5VZL5 1548 aa-0.4□□□□□ -2.47
SKA2-210ENST00000584089 DOCK2Q92608 1830 aa-0.41□□□□□ -2.47
SKA2-210ENST00000584089 MYO18BQ8IUG5 2567 aa-0.41□□□□□ -2.47
SKA2-210ENST00000584089 TEP1Q99973 2627 aaKnown RBP-0.41□□□□□ -2.47
SKA2-210ENST00000584089 TMEM2Q9UHN6 1383 aa-0.41□□□□□ -2.47
SKA2-210ENST00000584089 TRBV20-1A0A075B6N2 111 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 TRAV1-2A0A0B4J238 106 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 A0A1B0GV72 72 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 TMEM238C9JI98 176 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 I3L2K1 104 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 J3KT08 172 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 M0QZK8 103 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 PIRTP0C851 137 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 SPRR2EP22531 72 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 UBE2D1P51668 147 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 CRYBA4P53673 196 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 PIGYQ3MUY2 71 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 SAMD13Q5VXD3 122 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 VSTM2AQ8TAG5 236 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 HOPXQ9BPY8 73 aaPredicted RBP-0.41□□□□□ -2.48
SKA2-210ENST00000584089 DDA1Q9BW61 102 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 PCBD2Q9H0N5 130 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 TP53AIP1Q9HCN2 124 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 SAR1AQ9NR31 198 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 QRICH2Q9H0J4 1663 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 HIVEP1P15822 2718 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 ERCC6L2Q5T890 1561 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 ITPR3Q14573 2671 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 CDK5RAP2Q96SN8 1893 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 MRC1P22897 1456 aa-0.41□□□□□ -2.48
SKA2-210ENST00000584089 RAPGEF6Q8TEU7 1601 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 USP9YO00507 2555 aaPredicted RBP-0.42□□□□□ -2.48
SKA2-210ENST00000584089 KMT2CQ8NEZ4 4911 aaKnown RBP-0.42□□□□□ -2.48
SKA2-210ENST00000584089 NBASA2RRP1 2371 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 TRAV36DV7A0A075B6V5 113 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 NPFFO15130 113 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 NCR2O95944 276 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 PAEPP09466 180 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 699.8 ms