RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 DNAH12Q6ZR08 3092 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 CDH23Q9H251 3354 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 PDE4DIPQ5VU43 2346 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 COL6A3P12111 3177 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 IGLV2-18A0A075B6J9 118 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 A0A0J9YY99 117 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 TRBV6-1A0A0K0K1D8 114 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 TRBV10-2A0A0K0K1G8 114 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 PGPA6NDG6 321 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 ZNF815PA8K554 130 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 DEFB108AA8MXU0 73 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 F8VRH5 84 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 SH2D1AO60880 128 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 IGLV2-23P01705 113 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 IGHV3-30P01768 117 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 SCGB1C2P0DMR2 95 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 IGHV3-30-5P0DP03 117 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 RNASE2P10153 161 aaKnown RBP1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 CRYGAP11844 174 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 COX7CP15954 63 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 PLNP26678 52 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 FKBP2P26885 142 aaKnown RBP1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 HLA-DMBP28068 263 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 CKS2P33552 79 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 PFN2P35080 140 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 UBE2AP49459 152 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 SUB1P53999 127 aaKnown RBP eCLIP1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 DLX6P56179 175 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 SEC61GP60059 68 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 PRCDQ00LT1 54 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 REG3AQ06141 175 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 ESPL1Q14674 2120 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 ATXN8Q156A1 80 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 LYZL1Q6UWQ5 148 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 LYPD2Q6UXB3 125 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 LINC00336Q6ZUF6 198 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 GOLT1AQ6ZVE7 132 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 LINC00305Q7Z4B0 112 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 TMEM86BQ8N661 226 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 TMEM75Q8N9X5 138 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 TMEM263Q8WUH6 116 aaKnown RBP1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 LINC01600Q96MT4 127 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 SHANK2-AS3Q9BTD1 123 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 TMEM14BQ9NUH8 114 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 RPUSD1Q9UJJ7 312 aaKnown RBP1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 RP1P56715 2156 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 HTTP42858 3142 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 BRWD1Q9NSI6 2320 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 NAV3Q8IVL0 2385 aa1.32□□□□□ -2.2
PTP4A1-204ENST00000578299 SVILO95425 2214 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 MKI67P46013 3256 aaKnown RBP1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 TRBV7-1A0A0A6YYK4 115 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 TRAV12-1A0A0B4J245 112 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 TRAV41A0A0B4J266 112 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 TRAV17A0A0B4J275 112 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 A0A0B4J2C4 111 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 IGHV5-51A0A0C4DH38 117 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 FAM236DA0A1B0GTK5 79 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 PLAC8L1A1L4L8 177 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 H3BT86 120 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 H7C2G1 150 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 J3QQQ9 107 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 ATOX1O00244 68 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 UPK2O00526 184 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 CCL21O00585 134 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 IGHV3-33P01772 117 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 TRACP01848 142 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 TRGV3P03979 118 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 ATP5G1P05496 136 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 SAA1P0DJI8 122 aaPredicted RBP1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 SAA2P0DJI9 122 aaPredicted RBP1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 FAM236CP0DP71 79 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 ZNF22P17026 224 aaPredicted RBP1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 CRIP1P50238 77 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 PCBD1P61457 104 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 RPS28P62857 69 aaKnown RBP1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 DEFB103AP81534 67 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 EDDM3AQ14507 147 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 DEFB121Q5J5C9 76 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 C10orf55Q5SWW7 151 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 TMEM170BQ5T4T1 132 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 GUSBP11Q6P575 273 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 C2orf82Q6UX34 121 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 SCGB1D4Q6XE38 83 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 SDIM1Q6ZPB5 146 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 AAED1Q7RTV5 226 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 Q8IYB0 196 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 EXOC3-AS1Q8N2X6 119 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 Q8N8P6 123 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 KLF14Q8TD94 323 aaPredicted RBP1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 DPH3Q96FX2 82 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 METTL26Q96S19 204 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 AMELXQ99217 191 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 UPK3BQ9BT76 320 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 AGPAT4-IT1Q9H0P7 198 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 PRORYQ9H606 182 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 NXT2Q9NPJ8 142 aaKnown RBP1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 PRO0628Q9UI54 55 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 PKIGQ9Y2B9 76 aa1.31□□□□□ -2.2
PTP4A1-204ENST00000578299 DMDP11532 3685 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms